Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003832 Solanum tuberosum HOM05D000684 ORTHO05D000688 2.6e-47 191.8 104 100.0
Solyc12g013840.3 Solanum lycopersicum HOM05D000684 ORTHO05D000688 9.9e-39 163.3 116 81.0
Sopen12g007160 Solanum pennellii HOM05D000684 ORTHO05D000688 1.4e-37 159.5 116 78.4
PGSC0003DMG400015319 Solanum tuberosum HOM05D000684 ORTHO05D000688 5.4e-37 157.5 122 75.4
CAN.G1660.1 Capsicum annuum HOM05D000684 ORTHO05D000688 2.1e-33 145.6 123 70.7
Nitab4.5_0000332g0110 Nicotiana tabacum HOM05D000684 ORTHO05D000688 2.2e-30 135.6 96 80.2
Nitab4.5_0013057g0010 Nicotiana tabacum HOM05D000684 ORTHO05D000688 3.8e-30 134.8 101 79.2
Peaxi162Scf00000g00394 Petunia axillaris HOM05D000684 ORTHO05D000688 2.5e-26 122.1 102 69.6
Nitab4.5_0001241g0010 Nicotiana tabacum HOM05D000684 ORTHO05D000688 1.4e-21 106.3 100 64.0
Nitab4.5_0001336g0040 Nicotiana tabacum HOM05D000684 ORTHO05D000688 5.5e-21 104.4 100 62.0
CAN.G162.56 Capsicum annuum HOM05D000684 ORTHO05D000688 3.0e-19 98.6 100 62.0
Peaxi162Scf00069g00151 Petunia axillaris HOM05D000684 ORTHO05D000688 1.1e-18 96.7 100 60.0
Sopen07g031310 Solanum pennellii HOM05D000684 ORTHO05D000688 1.9e-18 95.9 101 60.4
Solyc07g063120.4 Solanum lycopersicum HOM05D000684 ORTHO05D000688 1.3e-17 93.2 100 57.0
MSTRG.12907 Avicennia marina HOM05D000684 ORTHO05D000688 8.5e-14 80.5 102 52.9
Dinv04304 Davidia involucrata HOM05D000084 ORTHO05D000363 1.9e-13 79.3 101 55.4
MSTRG.6835 Avicennia marina HOM05D000684 ORTHO05D000688 1.2e-12 76.6 102 50.0
SalBow7G3730 Salvia bowleyana HOM05D000684 ORTHO05D000688 1.8e-11 72.8 102 52.9
Peaxi162Scf00069g01428 Petunia axillaris HOM05D000684 ORTHO05D000688 6.7e-11 70.9 81 55.6
Cpa.g.sc80.65 Carica papaya HOM05D000684 ORTHO05D000688 2.5e-10 68.9 108 48.1
Cc05_g12010 Coffea canephora HOM05D000684 ORTHO05D000688 2.2e-09 65.9 98 46.9
Actinidia09688 Actinidia chinensis HOM05D000684 ORTHO05D000688 3.7e-09 65.1 101 49.5
Gohir.A11G285100 Gossypium hirsutum HOM05D000684 ORTHO05D000688 6.3e-09 64.3 104 46.2
Gorai.007G322900 Gossypium raimondii HOM05D000684 ORTHO05D000688 1.1e-08 63.5 104 47.1
CSS0027665 Camellia sinensis var. sinensis HOM05D000684 ORTHO05D000688 1.8e-08 62.8 101 49.5
COL.COLO4_27174 Corchorus olitorius HOM05D000684 ORTHO05D000688 2.4e-08 62.4 104 47.1
Hma1.2p1_0531F.1_g173340 Hydrangea macrophylla HOM05D000684 ORTHO05D000688 3.1e-08 62.0 100 47.0
Gohir.D11G297950 Gossypium hirsutum HOM05D000684 ORTHO05D000688 4.1e-08 61.6 104 46.2
Thecc.07G089800 Theobroma cacao HOM05D000684 ORTHO05D000688 4.1e-08 61.6 104 48.1
Duzib213G0513 Durio zibethinus HOM05D000684 ORTHO05D000688 9.1e-08 60.5 104 46.2
CSS0012938 Camellia sinensis var. sinensis HOM05D000684 ORTHO05D000688 1.2e-07 60.1 73 54.8
Haze_09429 Corylus avellana HOM05D000684 ORTHO05D000688 1.5e-07 59.7 103 49.5
Atru.chr2.2603 Acer truncatum HOM05D000684 ORTHO05D000688 2.6e-07 58.9 103 42.7
QL08p021921 Quercus lobata HOM05D000684 ORTHO05D000688 4.5e-07 58.2 103 46.6
Eucgr.F03314 Eucalyptus grandis HOM05D000684 ORTHO05D000688 7.7e-07 57.4 77 46.8
Lj1C842T9 Lonicera japonica HOM05D000684 ORTHO05D000688 1.7e-06 56.2 100 43.0
Hma1.2p1_0898F.1_g234420 Hydrangea macrophylla HOM05D000684 ORTHO05D000688 2.2e-06 55.8 101 44.6
RcHm_v2.0_Chr5g0033591 Rosa chinensis HOM05D000684 ORTHO05D000688 2.2e-06 55.8 103 49.5
Duzib268G1876 Durio zibethinus HOM05D000684 ORTHO05D000688 2.9e-06 55.5 104 45.2
Hma1.2p1_0898F.1_g234430 Hydrangea macrophylla HOM05D000684 ORTHO05D000688 2.9e-06 55.5 73 53.4
FAN11G2306 Fragaria x ananassa HOM05D000684 ORTHO05D000688 5.0e-06 54.7 110 45.5
FvH4_3g19920 Fragaria vesca HOM05D000684 ORTHO05D000688 6.5e-06 54.3 103 47.6
FAN21G0988 Fragaria x ananassa HOM05D000684 ORTHO05D000688 6.5e-06 54.3 103 47.6
FAN25G0411 Fragaria x ananassa HOM05D000684 ORTHO05D000688 6.5e-06 54.3 103 47.6
TAR629G2071 Trochodendron aralioides HOM05D000684 ORTHO05D000688 6.5e-06 54.3 106 44.3
TAR627G0708 Trochodendron aralioides HOM05D000684 ORTHO05D000688 8.5e-06 53.9 106 43.4


User provided reference genes

Program Settings