Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003808 Solanum tuberosum HOM05D002930 ORTHO05D003283 3.4e-80 301.6 151 100.0
Solyc09g074110.4 Solanum lycopersicum HOM05D002930 ORTHO05D003283 3.0e-52 208.8 106 98.1
Sopen09g028930 Solanum pennellii HOM05D002930 ORTHO05D003283 6.7e-52 207.6 106 97.2
CAN.G956.11 Capsicum annuum HOM05D002930 ORTHO05D003283 1.1e-43 180.3 106 86.8
Nitab4.5_0002927g0030 Nicotiana tabacum HOM05D002930 ORTHO05D003283 1.0e-39 167.2 106 84.0
Peaxi162Scf00941g00113 Petunia axillaris HOM05D002930 ORTHO05D003283 8.5e-39 164.1 106 78.3
Nitab4.5_0001323g0140 Nicotiana tabacum HOM05D002930 ORTHO05D003283 2.0e-32 142.9 101 78.2
Dinv11268 Davidia involucrata HOM05D002930 ORTHO05D003283 6.3e-26 121.3 107 57.9
Lj5g0012178 Lotus japonicus HOM05D002930 ORTHO05D003283 1.4e-25 120.2 108 53.7
Migut.N02138 Erythranthe guttata HOM05D002930 ORTHO05D003283 6.9e-25 117.9 107 56.1
SalBow6G0735 Salvia bowleyana HOM05D002930 ORTHO05D003283 9.1e-25 117.5 107 57.0
Potri.014G137200 Populus trichocarpa HOM05D002930 ORTHO05D003283 4.5e-24 115.2 108 53.7
Actinidia21090 Actinidia chinensis HOM05D002930 ORTHO05D003283 5.9e-24 114.8 107 57.9
Sabra14G0103600 Salix brachista HOM05D002930 ORTHO05D003283 1.0e-23 114.0 108 51.9
CSS0023451 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 1.3e-23 113.6 107 56.1
Atru.chr5.1328 Acer truncatum HOM05D002930 ORTHO05D003283 2.2e-23 112.8 108 50.9
GSVIVG01011059001 Vitis vinifera HOM05D002930 ORTHO05D003283 1.4e-22 110.2 107 52.3
CiPaw.07G095900 Carya illinoinensis HOM05D002930 ORTHO05D003283 2.5e-22 109.4 106 54.7
Rhsim01G0277700 Rhododendron simsii HOM05D002930 ORTHO05D003283 3.2e-22 109.0 107 56.1
vmacro14944 Vaccinium macrocarpon HOM05D002930 ORTHO05D003283 7.2e-22 107.8 117 53.8
Cfa006078 Carpinus fangiana HOM05D002930 ORTHO05D003283 9.4e-22 107.5 108 50.9
Haze_04772 Corylus avellana HOM05D002930 ORTHO05D003283 9.4e-22 107.5 108 51.9
Lalb_Chr21g0306621 Lupinus albus HOM05D002930 ORTHO05D003283 2.1e-21 106.3 108 50.0
MSTRG.17432 Avicennia marina HOM05D002930 ORTHO05D003283 2.7e-21 105.9 107 49.5
Glyma.02G150200 Glycine max HOM05D002930 ORTHO05D003283 3.6e-21 105.5 108 50.9
Gorai.004G215100 Gossypium raimondii HOM05D002930 ORTHO05D003283 3.6e-21 105.5 126 46.8
QL12p022973 Quercus lobata HOM05D002930 ORTHO05D003283 3.6e-21 105.5 108 49.1
TAR365G0233 Trochodendron aralioides HOM05D002930 ORTHO05D003283 3.6e-21 105.5 108 50.9
Phvul.007G168500 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 1.0e-20 104.0 108 52.8
Duzib138G0507 Durio zibethinus HOM05D002930 ORTHO05D003283 1.8e-20 103.2 112 48.2
Glyma.10G023700 Glycine max HOM05D002930 ORTHO05D003283 1.8e-20 103.2 108 50.0
PGR119G1041 Punica granatum HOM05D002930 ORTHO05D003283 1.8e-20 103.2 108 50.0
SGA_v2.0_scaffold172G39040 Striga asiatica HOM05D002930 ORTHO05D003283 1.8e-20 103.2 107 48.6
Oeu047489.1 Olea europaea HOM05D002930 ORTHO05D003283 2.3e-20 102.8 107 52.3
TWI59G1251 Tripterygium wilfordii HOM05D002930 ORTHO05D003283 2.3e-20 102.8 108 49.1
FAN27G1593 Fragaria x ananassa HOM05D002930 ORTHO05D003283 3.0e-20 102.4 126 43.7
Psat6g169880 Pisum sativum HOM05D002930 ORTHO05D003283 3.0e-20 102.4 108 50.0
Thecc.01G286000 Theobroma cacao HOM05D002930 ORTHO05D003283 3.0e-20 102.4 108 49.1
FvH4_2g24180 Fragaria vesca HOM05D002930 ORTHO05D003283 3.9e-20 102.1 126 42.9
MD03G1271800 Malus domestica HOM05D002930 ORTHO05D003283 3.9e-20 102.1 127 44.9
AT2G48060 Arabidopsis thaliana HOM05D002930 ORTHO05D003283 5.2e-20 101.7 108 46.3
FAN24G0623 Fragaria x ananassa HOM05D002930 ORTHO05D003283 1.1e-19 100.5 107 46.7
Lj1A43T58 Lonicera japonica HOM05D002930 ORTHO05D003283 1.1e-19 100.5 106 50.0
Aa31LG10G16860 Aethionema arabicum HOM05D002930 ORTHO05D003283 1.5e-19 100.1 108 50.0
AL4G47650 Arabidopsis lyrata HOM05D002930 ORTHO05D003283 1.5e-19 100.1 108 46.3
Carub.0004s3076 Capsella rubella HOM05D002930 ORTHO05D003283 1.5e-19 100.1 108 44.4
CSS0000102 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D033878 2.0e-19 99.8 103 52.4
CSS0004978 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 2.0e-19 99.8 82 58.5
Gohir.A08G185060 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.0e-19 99.8 109 47.7
Gohir.A11G119600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 3.3e-19 99.0 108 47.2
TPR.G13301 Trifolium pratense HOM05D002930 ORTHO05D003283 3.3e-19 99.0 106 49.1
ClCG09G006750 Citrullus lanatus HOM05D002930 ORTHO05D003283 7.4e-19 97.8 108 49.1
GSVIVG01022038001 Vitis vinifera HOM05D002930 ORTHO05D003283 9.7e-19 97.4 108 48.1
BcaC02g12557 Brassica carinata HOM05D002930 ORTHO05D003283 1.7e-18 96.7 125 43.2
BNapus_Darmor_BZH_scaffold_188p00030 Brassica napus HOM05D002930 ORTHO05D003283 2.2e-18 96.3 125 43.2
BolSC55t61233H Brassica oleracea HOM05D002930 ORTHO05D003283 2.2e-18 96.3 125 43.2
Sc05g0005220 Simmondsia chinensis HOM05D002930 ORTHO05D003283 2.2e-18 96.3 118 44.1
CsaV3_7G028480 Cucumis sativus L. HOM05D002930 ORTHO05D003283 2.8e-18 95.9 108 48.1
Prupe.8G248000 Prunus persica HOM05D002930 ORTHO05D003283 2.8e-18 95.9 135 42.2
Aa31LG1G29470 Aethionema arabicum HOM05D002930 ORTHO05D003283 3.7e-18 95.5 108 42.6
MELO3C015874.2 Cucumis melo HOM05D002930 ORTHO05D003283 4.8e-18 95.1 108 48.1
Thhalv10001278m.g Eutrema salsugineum HOM05D002930 ORTHO05D003283 4.8e-18 95.1 108 44.4
Gohir.D11G124400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 4.8e-18 95.1 108 45.4
Gorai.007G133300 Gossypium raimondii HOM05D002930 ORTHO05D003283 4.8e-18 95.1 108 45.4
MD11G1292400 Malus domestica HOM05D002930 ORTHO05D003283 1.4e-17 93.6 127 41.7
A05p00070 Brassica napus HOM05D002930 ORTHO05D003283 5.3e-17 91.7 135 42.2
BraA05t19003Z Brassica rapa HOM05D002930 ORTHO05D003283 5.3e-17 91.7 135 42.2
Duzib177G0642 Durio zibethinus HOM05D002930 ORTHO05D003283 7.0e-17 91.3 108 44.4
BcaB02g08731 Brassica carinata HOM05D002930 ORTHO05D003283 1.2e-16 90.5 98 46.9
Nn3g21179 Nelumbo nucifera HOM05D002930 ORTHO05D003283 1.2e-16 90.5 108 44.4
RcHm_v2.0_Chr6g0291991 Rosa chinensis HOM05D002930 ORTHO05D003283 1.6e-16 90.1 116 44.8
Eucgr.H01545 Eucalyptus grandis HOM05D002930 ORTHO05D003283 2.6e-16 89.4 98 48.0
Sp4g29950 Schrenkiella parvula HOM05D002930 ORTHO05D003283 3.5e-16 89.0 108 39.8
CANSAT25G2793 Cannabis sativa HOM05D002930 ORTHO05D003283 4.5e-16 88.6 99 44.4
THA.LOC104802222 Tarenaya hassleriana HOM05D002930 ORTHO05D003283 5.9e-16 88.2 108 44.4
DCAR_012455 Daucus carota HOM05D002930 ORTHO05D003283 7.7e-16 87.8 112 46.4
Sed0017862 Sechium edule HOM05D002930 ORTHO05D003283 7.7e-16 87.8 108 46.3
MBI19_g21638_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 1.0e-15 87.4 91 47.3
Zm00001eb131990 Zea mays HOM05D002930 ORTHO05D003283 1.3e-15 87.0 112 45.5
Gohir.D13G110101 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.9e-15 85.9 108 44.4
Gorai.009G179600 Gossypium raimondii HOM05D002930 ORTHO05D003283 2.9e-15 85.9 101 44.6
Gorai.013G123400 Gossypium raimondii HOM05D002930 ORTHO05D003283 2.9e-15 85.9 108 44.4
BolC4t28786H Brassica oleracea HOM05D002930 ORTHO05D003283 1.5e-14 83.6 108 40.7
Aqoxy211s001 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 1.9e-14 83.2 112 38.4
Thecc.05G299700 Theobroma cacao HOM05D002930 ORTHO05D003283 1.9e-14 83.2 107 41.1
SGA_v2.0_scaffold11G05785 Striga asiatica HOM05D002930 ORTHO05D003283 2.5e-14 82.8 114 43.0
Aqoxy2G03186 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 4.2e-14 82.0 107 38.3
BraA04t18952Z Brassica rapa HOM05D002930 ORTHO05D003283 9.4e-14 80.9 108 40.7
HanXRQChr04g0117981 Helianthus annuus HOM05D002930 ORTHO05D003283 9.4e-14 80.9 117 41.0
CARHR143440 Cardamine hirsuta HOM05D002930 ORTHO05D003283 1.2e-13 80.5 108 38.9
ECA247G2962 Erigeron canadensis HOM05D002930 ORTHO05D003283 4.7e-13 78.6 116 41.4
Actinidia05730 Actinidia chinensis HOM05D002930 ORTHO05D003283 1.4e-12 77.0 111 42.3
Manes.09G162700 Manihot esculenta HOM05D002930 ORTHO05D003283 1.8e-12 76.6 135 34.8
SalBow3G3307 Salvia bowleyana HOM05D002930 ORTHO05D003283 1.8e-12 76.6 86 53.5
HPP92_027329 Vanilla planifolia HOM05D002930 ORTHO05D003283 1.8e-12 76.6 120 40.8
Lsat_1_v5_gn_8_55460 Lactuca sativa HOM05D002930 ORTHO05D003283 2.3e-12 76.3 97 46.4
ECA236G2879 Erigeron canadensis HOM05D002930 ORTHO05D003283 3.0e-12 75.9 116 38.8
HPP92_017200 Vanilla planifolia HOM05D002930 ORTHO05D003283 4.0e-12 75.5 120 39.2
PSO302G0276 Papaver somniferum HOM05D002930 ORTHO05D003283 1.2e-11 73.9 108 37.0
EL10Ac7g17191 Beta vulgaris HOM05D002930 ORTHO05D003283 1.5e-11 73.6 98 34.7
Hund05358 Selenicereus undatus HOM05D002930 ORTHO05D003283 1.5e-11 73.6 90 47.8
PSO170G5253 Papaver somniferum HOM05D002930 ORTHO05D003283 2.0e-11 73.2 108 36.1
Ah.08g212870 Amaranthus hybridus HOM05D002930 ORTHO05D003283 3.3e-11 72.4 113 36.3
PSO210G3942 Papaver somniferum HOM05D002930 ORTHO05D003283 2.8e-10 69.3 94 40.4
HanXRQChr15g0466571 Helianthus annuus HOM05D002930 ORTHO05D003283 4.8e-10 68.6 98 44.9
Potri.005G037700 Populus trichocarpa HOM05D002930 ORTHO05D003283 1.4e-09 67.0 75 45.3
Medtr7g113930 Medicago truncatula HOM05D002930 ORTHO05D003283 5.3e-09 65.1 109 40.4
Gohir.A13G106800 Gossypium hirsutum HOM05D002930 ORTHO05D003283 9.1e-09 64.3 92 40.2
Lalb_Chr04g0260851 Lupinus albus HOM05D002930 ORTHO05D003283 9.1e-09 64.3 92 42.4
CANSAT54G0439 Cannabis sativa HOM05D002930 ORTHO05D003283 1.2e-08 63.9 76 43.4
Aqoxy5G00565 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 1.6e-08 63.5 96 37.5
ATR0626G265 Amborella trichopoda HOM05D002930 ORTHO05D003283 2.0e-08 63.2 82 48.8
Sabra05G0038400 Salix brachista HOM05D002930 ORTHO05D003283 2.7e-08 62.8 75 42.7
AUR62033688 Chenopodium quinoa HOM05D002930 ORTHO05D003283 3.5e-08 62.4 79 41.8
Psat3g009520 Pisum sativum HOM05D002930 ORTHO05D003283 4.5e-08 62.0 110 40.0
TPR.G33213 Trifolium pratense HOM05D002930 ORTHO05D003283 4.5e-08 62.0 110 39.1
Eucgr.B02004 Eucalyptus grandis HOM05D002930 ORTHO05D003283 1.0e-07 60.8 104 37.5
arahy.Tifrunner.gnm1.ann1.MJP89X Arachis hypogaea HOM05D002930 ORTHO05D003283 2.9e-07 59.3 96 39.6
Glyma.19G238300 Glycine max HOM05D002930 ORTHO05D003283 2.9e-07 59.3 109 36.7
Gohir.D05G174300 Gossypium hirsutum HOM05D002930 ORTHO05D003283 8.5e-07 57.8 73 45.2
PGR083G0736 Punica granatum HOM05D002930 ORTHO05D003283 8.5e-07 57.8 101 37.6


User provided reference genes

Program Settings