Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 0.0e+00 1075.5 534 100.0
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 1.7e-304 1048.5 534 97.2
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 2.3e-301 1038.1 534 96.4
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 7.6e-284 979.9 534 89.7
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 7.1e-266 920.2 536 83.8
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 1.7e-246 855.9 484 84.5
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 6.1e-201 704.5 538 65.2
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 3.3e-194 682.2 596 60.1
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 3.6e-193 678.7 538 62.3
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 8.0e-193 677.6 540 62.6
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 4.0e-192 675.2 542 62.7
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 2.4e-189 666.0 539 62.2
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 8.6e-187 657.5 537 60.1
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 6.2e-185 651.4 541 61.2
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 1.1e-184 650.6 538 58.4
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 1.3e-182 643.7 539 60.1
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 2.2e-182 642.9 492 64.4
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 3.7e-182 642.1 541 59.3
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 3.7e-182 642.1 541 60.1
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 5.4e-181 638.3 541 59.5
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 5.4e-181 638.3 541 60.1
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.1e-180 636.3 541 60.1
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 2.7e-180 636.0 543 59.5
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 3.5e-180 635.6 541 57.1
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 6.0e-180 634.8 541 59.0
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 6.0e-180 634.8 567 57.0
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 6.0e-180 634.8 541 61.0
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 1.0e-179 634.0 543 59.3
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 1.3e-179 633.6 541 56.4
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 1.7e-179 633.3 543 56.2
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 2.5e-178 629.4 531 60.5
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 9.5e-178 627.5 563 57.0
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 3.6e-177 625.5 541 58.2
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.4e-176 623.6 540 57.4
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 3.1e-176 622.5 540 56.9
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 1.5e-175 620.2 541 56.2
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 3.4e-175 619.0 540 58.0
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 4.4e-175 618.6 530 58.7
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 7.6e-175 617.8 544 59.0
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 7.6e-175 617.8 538 57.2
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 9.9e-175 617.5 538 57.2
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 2.9e-174 615.9 545 57.8
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 4.9e-174 615.1 540 56.3
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 4.9e-174 615.1 540 56.7
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.1e-173 614.0 538 56.7
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 3.2e-173 612.5 547 57.4
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 4.1e-173 612.1 542 57.4
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 4.1e-173 612.1 544 56.8
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 5.4e-173 611.7 541 58.0
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 2.1e-172 609.8 541 57.1
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 3.5e-172 609.0 586 54.4
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 4.6e-172 608.6 534 57.7
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 1.0e-171 607.4 542 55.0
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 1.7e-171 606.7 544 57.0
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 3.9e-171 605.5 541 54.9
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 1.9e-170 603.2 541 56.6
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 1.9e-170 603.2 541 55.3
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 7.3e-170 601.3 541 56.4
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 6.2e-169 598.2 538 55.8
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 6.9e-168 594.7 541 55.8
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 7.6e-167 591.3 540 56.1
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 2.4e-165 586.3 545 53.9
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.2e-165 585.9 538 53.5
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 4.2e-165 585.5 545 53.9
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 4.2e-165 585.5 541 56.4
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.6e-164 583.6 540 55.0
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 4.6e-164 582.0 545 53.6
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 4.6e-164 582.0 543 53.4
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 1.3e-163 580.5 543 53.2
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 1.3e-163 580.5 543 52.5
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 3.9e-163 578.9 548 55.7
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 1.5e-162 577.0 544 53.3
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 3.3e-162 575.9 543 53.2
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 9.6e-162 574.3 543 52.9
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.3e-161 573.9 541 55.3
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 4.5e-159 565.5 538 52.6
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 5.8e-159 565.1 538 50.9
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.2e-157 559.3 630 48.6
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 2.1e-156 556.6 575 48.5
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 2.3e-155 553.1 469 60.1
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 4.3e-154 548.9 543 50.8
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 1.6e-153 547.0 525 55.2
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 1.1e-152 544.3 549 51.9
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 1.4e-152 543.9 549 51.9
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 2.2e-150 536.6 543 49.9
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.9e-150 536.2 447 61.3
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 2.4e-149 533.1 457 54.9
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 1.4e-144 517.3 542 48.9
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 1.4e-141 507.3 428 59.8
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 6.7e-131 471.9 471 50.1
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 6.7e-131 471.9 543 46.6
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 1.5e-130 470.7 540 49.3
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 2.0e-130 470.3 549 46.8
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 5.3e-128 462.2 561 48.0
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 2.0e-122 443.7 468 50.2
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 1.4e-120 437.6 554 46.2
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 5.3e-120 435.6 558 45.2
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 8.5e-118 428.3 310 66.5
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 5.2e-107 392.5 487 45.2
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 2.4e-104 383.6 400 49.0
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 6.8e-91 339.0 558 36.2
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 3.1e-83 313.5 573 35.6
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 9.2e-80 302.0 561 34.4
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 5.0e-78 296.2 466 37.6
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 8.6e-78 295.4 575 36.3
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 9.5e-77 292.0 568 36.1
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 2.3e-75 287.3 218 64.2
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 4.9e-57 226.5 256 47.3
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 7.1e-56 222.6 208 55.3
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 7.6e-42 176.0 173 54.3
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 2.4e-40 171.0 108 73.1
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 7.4e-29 132.9 187 41.7
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 6.2e-28 129.8 76 81.6
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 5.0e-25 120.2 124 50.0
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 9.3e-24 115.9 119 44.5
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 2.9e-17 94.4 63 66.7
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 1.4e-14 85.5 69 63.8
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 2.2e-09 68.2 92 40.2
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 4.2e-08 63.9 36 77.8
ATR0772G016 Amborella trichopoda HOM05D006431 ORTHO05D007918 7.2e-08 63.2 159 29.6
EL10Ac7g16823 Beta vulgaris HOM05D006431 ORTHO05D007918 1.2e-07 62.4 128 30.5
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 6.1e-07 60.1 51 60.8


User provided reference genes

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