Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 5.2e-108 394.4 205 100.0
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 5.2e-100 367.9 208 93.8
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 7.6e-99 364.0 208 93.3
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.6e-93 346.3 214 86.9
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 3.1e-92 342.0 208 88.0
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 8.7e-87 323.9 218 82.1
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 9.3e-73 277.3 216 74.1
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.6e-72 276.6 213 71.4
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 4.6e-72 275.0 210 72.4
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 7.9e-72 274.2 217 69.6
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 1.0e-71 273.9 208 70.2
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 1.8e-71 273.1 150 92.7
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.3e-71 272.7 211 68.7
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 2.3e-71 272.7 218 69.7
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 2.5e-70 269.2 210 70.0
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 4.3e-70 268.5 173 78.6
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 4.3e-70 268.5 211 71.6
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 5.6e-70 268.1 221 66.5
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 9.6e-70 267.3 210 69.0
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 9.6e-70 267.3 210 69.0
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 9.6e-70 267.3 211 67.8
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 9.6e-70 267.3 213 68.1
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 3.7e-69 265.4 220 66.4
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 4.8e-69 265.0 190 72.6
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 4.8e-69 265.0 216 67.6
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 4.8e-69 265.0 213 66.7
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 8.1e-69 264.2 232 63.4
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.4e-68 263.5 215 67.4
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.1e-68 262.3 214 69.6
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 3.1e-68 262.3 218 67.4
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.5e-67 260.0 216 66.7
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.0e-67 259.6 206 69.9
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 5.8e-67 258.1 211 64.9
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 7.6e-67 257.7 211 63.5
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.0e-66 257.3 216 68.1
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 1.0e-66 257.3 212 69.3
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 1.7e-66 256.5 215 67.0
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 2.9e-66 255.8 214 64.5
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 2.9e-66 255.8 216 65.7
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 6.5e-66 254.6 150 84.7
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.4e-65 253.4 209 66.0
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.9e-65 253.1 150 84.0
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 1.9e-65 253.1 210 64.3
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 5.5e-65 251.5 219 64.4
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 7.1e-65 251.1 220 63.6
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 9.3e-65 250.8 155 80.0
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 9.3e-65 250.8 213 67.1
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 2.1e-64 249.6 214 63.6
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 3.5e-64 248.8 209 66.0
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 4.6e-64 248.4 228 60.1
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 6.0e-64 248.1 218 61.9
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 7.9e-64 247.7 215 63.3
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 1.8e-63 246.5 234 63.2
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 1.8e-63 246.5 207 63.8
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 2.3e-63 246.1 153 79.7
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.3e-63 246.1 219 65.8
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 3.0e-63 245.7 213 65.3
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 3.0e-63 245.7 214 62.6
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 5.1e-63 245.0 184 70.7
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.1e-63 245.0 136 86.8
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 5.1e-63 245.0 218 65.1
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 8.7e-63 244.2 205 64.9
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 7.4e-62 241.1 214 61.7
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 9.6e-62 240.7 211 63.0
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 2.8e-61 239.2 179 68.7
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 3.7e-61 238.8 205 63.9
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 4.8e-61 238.4 193 65.3
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.1e-60 237.3 205 67.3
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 9.0e-60 234.2 153 74.5
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.5e-59 233.4 212 62.7
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.0e-59 233.0 211 60.7
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 3.4e-59 232.3 147 77.6
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 4.5e-59 231.9 153 73.9
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 7.6e-59 231.1 175 65.7
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.7e-58 229.9 210 62.9
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.8e-58 228.8 151 78.1
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 3.8e-58 228.8 193 67.9
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 3.8e-58 228.8 194 60.3
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.4e-57 226.9 211 59.7
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.9e-57 226.5 153 72.5
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 3.2e-57 225.7 161 68.9
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.7e-56 222.6 208 62.0
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 4.6e-56 221.9 226 54.9
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.0e-55 220.7 179 69.8
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.8e-55 219.9 184 63.6
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.1e-54 217.2 218 59.6
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 1.1e-54 217.2 128 81.2
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 3.3e-54 215.7 215 58.6
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 4.3e-54 215.3 152 68.4
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 4.3e-54 215.3 152 68.4
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 2.2e-53 213.0 212 56.1
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 2.4e-52 209.5 183 61.2
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 4.1e-52 208.8 192 60.9
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 9.1e-52 207.6 151 66.9
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 5.9e-51 204.9 224 53.1
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 7.7e-51 204.5 227 55.9
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.7e-50 203.4 158 60.1
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 3.8e-50 202.2 151 62.9
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.0e-47 194.1 108 88.9
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 1.1e-46 190.7 109 84.4
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 1.1e-44 184.1 173 61.8
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 1.1e-44 184.1 191 51.3
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 8.5e-42 174.5 110 79.1
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 2.3e-39 166.4 149 63.8
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 1.5e-33 147.1 145 60.7
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.6e-32 143.7 160 53.8
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.6e-32 142.5 148 58.1
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 2.3e-31 139.8 151 53.0
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 8.8e-31 137.9 160 54.4
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 2.0e-30 136.7 72 88.9
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 9.1e-28 127.9 164 44.5
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 4.4e-22 109.0 68 75.0
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 4.4e-22 109.0 68 75.0
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 7.2e-17 91.7 58 75.9
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.2e-16 90.9 52 88.5
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 2.8e-16 89.7 100 55.0


User provided reference genes

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