Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003582 Solanum tuberosum HOM05D005052 ORTHO05D006226 1.2e-250 869.4 440 100.0
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 2.0e-242 842.0 443 96.8
Sopen02g028370 Solanum pennellii HOM05D005052 ORTHO05D006226 7.7e-242 840.1 443 96.6
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 7.2e-232 807.0 444 93.5
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 3.6e-231 804.7 444 92.8
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 4.0e-230 801.2 443 92.3
Peaxi162Scf00328g00523 Petunia axillaris HOM05D005052 ORTHO05D006226 7.8e-218 760.4 445 88.8
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 2.6e-205 718.8 442 82.6
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 4.4e-197 691.4 445 79.1
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 1.3e-196 689.9 441 80.0
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 6.4e-196 687.6 452 78.3
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 8.7e-193 677.2 446 77.6
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 6.2e-191 671.0 399 83.7
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 8.1e-191 670.6 451 77.2
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 1.1e-190 670.2 437 77.6
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 4.0e-190 668.3 441 76.6
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.5e-189 666.4 378 85.7
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 2.0e-189 666.0 390 84.1
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 3.4e-189 665.2 417 79.1
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 3.4e-189 665.2 459 74.3
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 4.4e-189 664.8 449 75.9
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 5.8e-189 664.5 444 76.4
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 5.8e-189 664.5 443 76.5
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 9.9e-189 663.7 424 78.3
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 1.3e-188 663.3 439 77.4
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 1.7e-188 662.9 392 83.4
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 1.7e-188 662.9 400 82.2
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 3.8e-188 661.8 392 83.2
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 4.9e-188 661.4 392 82.9
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 6.4e-188 661.0 413 80.6
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 1.9e-187 659.4 428 78.5
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 2.4e-187 659.1 444 75.9
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 3.2e-187 658.7 447 75.8
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 4.2e-187 658.3 443 76.1
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 5.4e-187 657.9 392 82.9
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 7.1e-187 657.5 445 76.0
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 9.3e-187 657.1 437 75.5
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 9.3e-187 657.1 439 76.5
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 1.2e-186 656.8 424 78.1
AT5G66120 Arabidopsis thaliana HOM05D005052 ORTHO05D006226 1.6e-186 656.4 432 77.5
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 2.1e-186 656.0 393 82.7
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 2.7e-186 655.6 442 75.6
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 4.6e-186 654.8 413 79.4
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 4.6e-186 654.8 446 75.3
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 4.6e-186 654.8 480 73.3
FAN28G0876 Fragaria x ananassa HOM05D005052 ORTHO05D006226 6.0e-186 654.4 403 80.9
AL8G45470 Arabidopsis lyrata HOM05D005052 ORTHO05D006226 7.8e-186 654.1 413 80.4
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 7.8e-186 654.1 418 78.7
FvH4_1g11430 Fragaria vesca HOM05D005052 ORTHO05D006226 1.3e-185 653.3 403 80.9
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 1.3e-185 653.3 429 77.2
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 1.7e-185 652.9 402 80.3
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 1.7e-185 652.9 444 75.0
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 1.7e-185 652.9 417 78.4
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 2.3e-185 652.5 421 77.7
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 2.3e-185 652.5 403 80.1
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 2.3e-185 652.5 388 81.7
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 3.0e-185 652.1 424 77.4
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 3.9e-185 651.7 408 79.2
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 5.1e-185 651.4 398 81.2
FAN19G0738 Fragaria x ananassa HOM05D005052 ORTHO05D006226 8.7e-185 650.6 403 80.9
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 1.1e-184 650.2 413 79.9
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 1.5e-184 649.8 372 85.5
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 1.5e-184 649.8 400 81.2
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 1.5e-184 649.8 400 81.2
Sp2g30570 Schrenkiella parvula HOM05D005052 ORTHO05D006226 1.5e-184 649.8 407 80.6
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 3.3e-184 648.7 410 78.8
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 3.3e-184 648.7 443 74.0
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 4.3e-184 648.3 397 79.8
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 5.6e-184 647.9 396 81.6
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 5.6e-184 647.9 442 75.3
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 9.6e-184 647.1 382 81.9
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 1.3e-183 646.7 409 79.0
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 1.3e-183 646.7 409 79.0
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 1.3e-183 646.7 409 79.0
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 1.6e-183 646.4 422 78.2
FAN23G2381 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.6e-183 646.4 402 80.6
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 2.1e-183 646.0 379 82.1
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 2.8e-183 645.6 437 76.0
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 2.8e-183 645.6 437 75.1
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 4.8e-183 644.8 378 83.1
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 4.8e-183 644.8 513 66.7
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 6.2e-183 644.4 390 81.0
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 8.1e-183 644.0 410 78.3
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 8.1e-183 644.0 423 76.6
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 1.4e-182 643.3 382 82.7
FAN26G3360 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.8e-182 642.9 457 73.3
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 3.1e-182 642.1 439 75.6
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 5.3e-182 641.3 445 73.3
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 1.2e-181 640.2 387 82.4
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 2.6e-181 639.0 439 73.6
MBI05_g23388_MAGBIO Magnolia biondii HOM05D005052 ORTHO05D006226 3.4e-181 638.6 393 80.4
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 2.2e-180 636.0 375 83.5
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 2.9e-180 635.6 390 80.5
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 8.4e-180 634.0 414 76.8
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 1.2e-178 630.2 408 76.2
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 2.7e-178 629.0 384 80.5
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 3.5e-178 628.6 378 82.0
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 2.3e-177 625.9 366 83.6
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 3.7e-175 618.6 364 83.5
HPP92_025914 Vanilla planifolia HOM05D005052 ORTHO05D006226 4.8e-175 618.2 433 70.9
HPP92_025909 Vanilla planifolia HOM05D005052 ORTHO05D006226 1.1e-174 617.1 433 70.9
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 6.7e-169 597.8 376 75.8
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 1.2e-165 587.0 388 77.1
Mapoly0031s0094 Marchantia polymorpha HOM05D005052 ORTHO05D006226 5.8e-165 584.7 382 73.6
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 2.9e-164 582.4 385 72.2
CSS0012363 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 4.9e-164 581.6 328 86.3
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 5.5e-163 578.2 364 75.5
Zm00001eb331970 Zea mays HOM05D005052 ORTHO05D006226 1.5e-160 570.1 373 75.9
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 5.0e-156 555.1 446 67.3
Lsat_1_v5_gn_3_125660 Lactuca sativa HOM05D005052 ORTHO05D006226 6.1e-154 548.1 417 69.3
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 7.9e-154 547.7 398 70.9
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 3.0e-153 545.8 406 68.5
Cre08.g368950 Chlamydomonas reinhardtii HOM05D005052 ORTHO05D006226 3.6e-146 522.3 394 66.5
Actinidia17421 Actinidia chinensis HOM05D005052 ORTHO05D006226 3.7e-143 512.3 287 86.8
MCO01G625 Micromonas commoda HOM05D005052 ORTHO05D006226 7.0e-142 508.1 419 59.4
EL10Ac6g15523 Beta vulgaris HOM05D005052 ORTHO05D006226 1.3e-140 503.8 455 59.1
CDE04G1415 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 2.3e-137 493.0 287 81.9
Manes.02G107200 Manihot esculenta HOM05D005052 ORTHO05D006226 1.8e-134 483.4 332 73.8
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 9.4e-131 471.1 376 66.5
Ah.03g149130 Amaranthus hybridus HOM05D005052 ORTHO05D006226 1.8e-129 466.8 273 84.6
PRCOL_00000314 Prasinoderma coloniale HOM05D005052 ORTHO05D006226 5.7e-128 461.8 378 59.3
SEGI_14262 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.7e-119 433.7 292 72.3
Dinv33661 Davidia involucrata HOM05D005052 ORTHO05D006226 2.6e-112 409.8 233 86.3
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 2.0e-109 400.2 450 53.1
CDE02G2775 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 5.9e-109 398.7 314 64.3
SEGI_08539 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.9e-94 350.5 224 73.7
CDE02G1558 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 1.2e-85 321.2 256 64.8
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 8.6e-84 315.1 243 65.0
Lsat_1_v5_gn_0_46241 Lactuca sativa HOM05D005052 ORTHO05D006226 1.3e-76 291.2 299 48.2
TPR.G6592 Trifolium pratense HOM05D005052 ORTHO05D006226 1.2e-72 278.1 273 57.1
RcHm_v2.0_Chr2g0099011 Rosa chinensis HOM05D005052 ORTHO05D006226 3.4e-72 276.6 246 59.3
unitig_699.g19702 Utricularia gibba HOM05D005052 ORTHO05D006226 4.2e-70 269.6 161 82.6
Haze_27270 Corylus avellana HOM05D005052 ORTHO05D006226 3.0e-68 263.5 355 43.4
Dinv33662 Davidia involucrata HOM05D005052 ORTHO05D006226 4.0e-57 226.5 208 62.0
Cfa024476 Carpinus fangiana HOM05D003566 ORTHO05D126353 9.0e-57 225.3 346 42.5
unitig_699.g19703 Utricularia gibba HOM05D005052 ORTHO05D006226 1.9e-51 207.6 192 62.0
Rhsim07G0143100 Rhododendron simsii HOM05D005052 ORTHO05D006226 1.0e-44 185.3 184 58.2
SEGI_40904 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.3e-42 178.3 113 76.1
Ah.03g149140 Amaranthus hybridus HOM05D000441 ORTHO05D000340 1.8e-28 131.3 95 69.5
SEGI_17140 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 4.8e-26 123.2 83 71.1
SEGI_34573 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 4.8e-26 123.2 83 71.1
MD02G1126200 Malus domestica HOM05D005052 ORTHO05D006226 9.1e-25 119.0 129 52.7
MD14G1099300 Malus domestica HOM05D005052 ORTHO05D006226 9.1e-25 119.0 129 52.7
Rhsim07G0135500 Rhododendron simsii HOM05D005052 ORTHO05D006226 6.1e-21 106.3 71 70.4
CDE04G1456 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 6.7e-20 102.8 73 63.0
SEGI_22853 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 3.3e-19 100.5 69 68.1
DCAR_004721 Daucus carota HOM05D005052 ORTHO05D006226 4.4e-19 100.1 113 51.3
Rhsim07G0135600 Rhododendron simsii HOM05D005052 ORTHO05D339393 1.6e-08 65.1 37 75.7
CSS0040013 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 7.2e-06 56.2 116 36.2


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