Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003496 Solanum tuberosum HOM05D000060 ORTHO05D000082 1.5e-48 196.4 149 100.0
PGSC0003DMG401000764 Solanum tuberosum HOM05D000060 ORTHO05D000082 2.9e-47 192.2 149 98.7
Solyc02g065150.2 Solanum lycopersicum HOM05D000060 ORTHO05D000082 7.5e-40 167.5 156 78.8
PGSC0003DMG402000764 Solanum tuberosum HOM05D000060 ORTHO05D000082 2.9e-39 165.6 149 90.6
Sopen02g015280 Solanum pennellii HOM05D000060 ORTHO05D000082 1.7e-36 156.4 157 82.8
Nitab4.5_0023257g0010 Nicotiana tabacum HOM05D000060 ORTHO05D000082 5.1e-20 101.7 94 79.8
Peaxi162Scf00049g01210 Petunia axillaris HOM05D000060 ORTHO05D000082 4.2e-14 82.0 163 50.9
Manes.12G093800 Manihot esculenta HOM05D000060 ORTHO05D000082 5.1e-12 75.1 138 50.0
CiPaw.02G010300 Carya illinoinensis HOM05D000060 ORTHO05D000082 2.5e-11 72.8 145 40.7
Haze_15440 Corylus avellana HOM05D000060 ORTHO05D000082 2.5e-11 72.8 134 56.7
GSVIVG01003546001 Vitis vinifera HOM05D000060 ORTHO05D000082 9.6e-11 70.9 79 50.6
Manes.13G128100 Manihot esculenta HOM05D000060 ORTHO05D000082 1.3e-10 70.5 123 45.5
Sabra07G0035800 Salix brachista HOM05D000060 ORTHO05D000082 4.8e-10 68.6 73 57.5
Oeu021845.1 Olea europaea HOM05D000060 ORTHO05D000082 1.4e-09 67.0 149 38.3
QL06p042731 Quercus lobata HOM05D000060 ORTHO05D000082 1.4e-09 67.0 128 55.5
Sabra05G0108400 Salix brachista HOM05D000060 ORTHO05D000082 1.8e-09 66.6 131 39.7
TWI53G1027 Tripterygium wilfordii HOM05D000060 ORTHO05D000082 2.4e-09 66.2 87 54.0
TWI73G0857 Tripterygium wilfordii HOM05D000060 ORTHO05D000082 3.1e-09 65.9 88 53.4
Gohir.D10G095200 Gossypium hirsutum HOM05D000060 ORTHO05D000082 5.3e-09 65.1 99 48.5
VMungo1215G3098 Vigna mungo HOM05D000060 ORTHO05D000082 6.9e-09 64.7 142 40.8
Manes.12G093700 Manihot esculenta HOM05D000060 ORTHO05D000082 9.0e-09 64.3 73 54.8
Gohir.A11G189800 Gossypium hirsutum HOM05D000060 ORTHO05D000082 1.2e-08 63.9 123 43.9
TWI09G1289 Tripterygium wilfordii HOM05D000060 ORTHO05D000082 1.2e-08 63.9 86 54.7
Gohir.A10G093000 Gossypium hirsutum HOM05D000060 ORTHO05D000082 1.5e-08 63.5 99 50.5
Gorai.007G210500 Gossypium raimondii HOM05D000060 ORTHO05D000082 2.6e-08 62.8 123 43.1
Potri.005G134900 Populus trichocarpa HOM05D000060 ORTHO05D000082 3.4e-08 62.4 136 47.1
HanXRQChr15g0489481 Helianthus annuus HOM05D000060 ORTHO05D000082 4.5e-08 62.0 107 45.8
DCAR_010922 Daucus carota HOM05D000060 ORTHO05D000082 7.6e-08 61.2 162 37.7
Gorai.011G104600 Gossypium raimondii HOM05D000060 ORTHO05D000082 9.9e-08 60.8 97 47.4
PGSC0003DMG400010023 Solanum tuberosum HOM05D000060 ORTHO05D000082 9.9e-08 60.8 95 51.6
Duzib264G0261 Durio zibethinus HOM05D000060 ORTHO05D000082 1.7e-07 60.1 118 47.5
Sopen02g035110 Solanum pennellii HOM05D000060 ORTHO05D000082 2.9e-07 59.3 94 53.2
Solyc02g090410.4 Solanum lycopersicum HOM05D000060 ORTHO05D000082 4.9e-07 58.5 94 46.8
COL.COLO4_11364 Corchorus olitorius HOM05D000060 ORTHO05D000082 6.4e-07 58.2 124 53.2
Peaxi162Scf00993g00038 Petunia axillaris HOM05D000060 ORTHO05D000082 8.4e-07 57.8 104 64.4
Phvul.002G021200 Phaseolus vulgaris HOM05D000060 ORTHO05D000082 1.1e-06 57.4 136 49.3
Sabra07G0035700 Salix brachista HOM05D000060 ORTHO05D000082 1.1e-06 57.4 125 36.0
Ciclev10027275m.g Citrus clementina HOM05D000060 ORTHO05D000082 1.4e-06 57.0 125 60.8
Actinidia30860 Actinidia chinensis HOM05D000060 ORTHO05D000082 1.9e-06 56.6 96 59.4
GSVIVG01004323001 Vitis vinifera HOM05D000060 ORTHO05D000082 2.4e-06 56.2 58 46.6
Gohir.D11G196600 Gossypium hirsutum HOM05D000060 ORTHO05D000082 5.5e-06 55.1 92 46.7
Thecc.01G050900 Theobroma cacao HOM05D000060 ORTHO05D000082 9.3e-06 54.3 105 58.1


User provided reference genes

Program Settings