Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003402 Solanum tuberosum HOM05D024486 ORTHO05D022728 7.3e-16 89.0 42 100.0
Peaxi162Scf00158g00320 Petunia axillaris HOM05D024486 ORTHO05D022728 6.4e-12 75.9 42 78.6
Peaxi162Scf00342g01327 Petunia axillaris HOM05D024486 ORTHO05D022728 2.4e-11 73.9 41 75.6
PGSC0003DMG400022035 Solanum tuberosum HOM05D000162 ORTHO05D000090 3.2e-11 73.6 38 92.1
Peaxi162Scf01021g00213 Petunia axillaris HOM05D024486 ORTHO05D022728 9.3e-11 72.0 42 73.8
Nitab4.5_0009617g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.6e-10 71.2 42 78.6
PGSC0003DMG400003400 Solanum tuberosum HOM05D011051 ORTHO05D003288 1.3e-09 68.2 38 86.8
PGSC0003DMG400003403 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.3e-09 68.2 38 86.8
Solyc06g007810.1 Solanum lycopersicum HOM05D011051 ORTHO05D000090 5.1e-09 66.2 38 84.2
Sopen06g002690 Solanum pennellii HOM05D000162 ORTHO05D000090 5.1e-09 66.2 38 84.2
Nitab4.5_0006390g0090 Nicotiana tabacum HOM05D011051 ORTHO05D003288 6.6e-09 65.9 35 80.0
PGSC0003DMG400003401 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.1e-08 65.1 38 81.6
Sopen06g002700 Solanum pennellii HOM05D000162 ORTHO05D000090 1.5e-08 64.7 38 81.6
Nitab4.5_0003952g0040 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.9e-08 64.3 38 78.9
Nitab4.5_0007991g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.9e-08 64.3 42 61.9
Nitab4.5_0003952g0090 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.5e-08 63.9 36 80.6
Solyc06g007850.3 Solanum lycopersicum HOM05D000162 ORTHO05D000090 7.3e-08 62.4 36 80.6
Nitab4.5_0000556g0140 Nicotiana tabacum HOM05D000162 ORTHO05D000090 9.6e-08 62.0 39 66.7
Nitab4.5_0002641g0030 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.6e-07 61.2 37 75.7
Nitab4.5_0003353g0010 Nicotiana tabacum HOM05D024486 ORTHO05D022728 2.1e-07 60.8 31 83.9
Nitab4.5_0003952g0020 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.8e-07 60.5 38 76.3
Peaxi162Scf00342g00125 Petunia axillaris HOM05D000162 ORTHO05D000090 3.6e-07 60.1 39 64.1
Nitab4.5_0002641g0070 Nicotiana tabacum HOM05D000162 ORTHO05D000090 8.1e-07 58.9 35 74.3
PGSC0003DMG400009683 Solanum tuberosum HOM05D000162 ORTHO05D000090 8.1e-07 58.9 37 75.7
Nitab4.5_0002468g0030 Nicotiana tabacum HOM05D011051 ORTHO05D003288 1.1e-06 58.5 42 61.9
CAN.G389.6 Capsicum annuum HOM05D011051 ORTHO05D003288 1.8e-06 57.8 37 70.3
CAN.G869.9 Capsicum annuum HOM05D000162 ORTHO05D000090 2.4e-06 57.4 34 73.5
Nitab4.5_0001998g0100 Nicotiana tabacum HOM05D001400 ORTHO05D016930 3.1e-06 57.0 31 77.4
CAN.G1443.12 Capsicum annuum HOM05D000162 ORTHO05D000090 4.0e-06 56.6 35 71.4
CAN.G1768.10 Capsicum annuum HOM05D000162 ORTHO05D000090 4.0e-06 56.6 35 71.4
CAN.G741.40 Capsicum annuum HOM05D000162 ORTHO05D000090 4.0e-06 56.6 35 71.4
Sopen06g002610 Solanum pennellii HOM05D000162 ORTHO05D000090 4.0e-06 56.6 38 71.1
Solyc06g007740.1 Solanum lycopersicum HOM05D000162 ORTHO05D000090 5.3e-06 56.2 38 68.4
Sopen06g001200 Solanum pennellii HOM05D000162 ORTHO05D003288 5.3e-06 56.2 37 67.6
Sopen06g002620 Solanum pennellii HOM05D000162 ORTHO05D000090 6.9e-06 55.8 38 68.4
Sopen06g004630 Solanum pennellii HOM05D011051 ORTHO05D003288 9.0e-06 55.5 38 65.8


User provided reference genes

Program Settings