Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 9.6e-184 646.7 336 100.0
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 4.4e-181 637.9 335 98.5
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 4.5e-173 611.3 336 94.0
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 3.9e-161 571.6 338 89.9
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 1.7e-156 556.2 336 86.0
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 4.3e-144 515.0 329 78.7
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 4.5e-141 505.0 302 89.7
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 5.0e-140 501.5 325 80.0
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 2.1e-138 496.1 337 77.2
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 3.6e-138 495.4 336 75.6
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 2.6e-136 489.2 337 75.4
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 3.3e-136 488.8 330 75.8
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 9.7e-136 487.3 254 98.4
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 6.3e-135 484.6 329 76.0
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 6.3e-135 484.6 337 75.7
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.8e-134 483.0 337 75.7
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 7.0e-134 481.1 337 75.1
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 1.2e-133 480.3 326 76.1
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 1.2e-133 480.3 330 74.5
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 1.5e-133 479.9 329 76.3
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 2.0e-133 479.6 337 73.0
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 2.0e-133 479.6 374 68.7
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 3.5e-133 478.8 337 74.8
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 3.5e-133 478.8 333 74.5
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 4.5e-133 478.4 337 75.4
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.3e-132 476.9 337 74.2
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 2.2e-132 476.1 329 72.6
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 3.8e-132 475.3 337 73.3
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 1.9e-131 473.0 357 70.6
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 9.4e-131 470.7 337 72.7
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 1.2e-130 470.3 333 72.7
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 1.2e-130 470.3 333 73.0
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 1.2e-130 470.3 329 74.5
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 2.1e-130 469.5 334 72.5
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 4.7e-130 468.4 333 73.0
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 1.0e-129 467.2 337 72.4
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 3.0e-129 465.7 333 72.4
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 5.2e-129 464.9 337 70.3
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 1.5e-128 463.4 328 73.5
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 2.6e-128 462.6 335 70.4
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 4.4e-128 461.8 337 71.8
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 4.4e-128 461.8 337 71.8
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 4.4e-128 461.8 337 70.0
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 4.4e-128 461.8 337 70.3
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 7.4e-128 461.1 333 71.8
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 9.7e-128 460.7 332 71.4
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.3e-127 460.3 338 71.0
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 2.8e-127 459.1 330 71.8
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 2.8e-127 459.1 338 71.0
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 3.7e-127 458.8 330 71.8
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 6.3e-127 458.0 330 72.1
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 1.1e-126 457.2 329 71.4
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.1e-126 457.2 325 72.6
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 1.8e-126 456.4 328 71.6
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 4.1e-126 455.3 336 68.8
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 5.3e-126 454.9 336 70.8
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 7.0e-126 454.5 337 69.4
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 7.0e-126 454.5 338 70.1
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 1.6e-125 453.4 336 69.6
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 1.6e-125 453.4 330 70.9
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 1.6e-125 453.4 330 71.5
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 2.0e-125 453.0 337 69.4
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 2.6e-125 452.6 337 70.0
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 3.5e-125 452.2 337 71.8
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 3.5e-125 452.2 334 69.5
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 3.8e-124 448.7 334 69.5
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 5.0e-124 448.4 353 68.3
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 6.5e-124 448.0 337 68.8
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 5.5e-123 444.9 321 70.1
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 7.2e-123 444.5 325 70.5
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 2.1e-122 443.0 321 70.1
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 6.1e-122 441.4 316 73.1
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 8.0e-122 441.0 346 68.2
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 8.0e-122 441.0 329 68.1
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 8.0e-122 441.0 337 71.5
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 1.7e-119 433.3 333 68.8
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 5.9e-117 424.9 398 60.6
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 1.0e-116 424.1 323 70.0
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 4.2e-115 418.7 327 67.3
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 3.0e-113 412.5 321 68.2
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.5e-112 410.2 337 65.9
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.9e-108 396.0 334 65.6
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 1.2e-106 390.6 325 64.0
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 2.1e-106 389.8 282 73.4
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 1.0e-105 387.5 337 64.4
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 3.6e-98 362.5 330 60.0
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 5.2e-97 358.6 329 60.5
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 8.9e-97 357.8 337 58.8
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 2.6e-96 356.3 333 55.9
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 3.6e-90 335.9 333 52.6
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 4.3e-83 312.4 321 50.5
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 4.7e-82 308.9 244 65.6
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 6.2e-82 308.5 207 77.8
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 4.0e-81 305.8 197 77.7
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 4.4e-80 302.4 325 50.2
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 3.9e-76 289.3 185 80.0
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.9e-75 287.0 325 47.1
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 8.7e-68 261.5 201 72.1
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 3.6e-66 256.1 373 45.6
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 4.8e-66 255.8 244 59.0
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 2.6e-64 250.0 352 40.3
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 5.8e-64 248.8 313 46.6
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.3e-63 247.7 325 42.5
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 4.2e-62 242.7 173 72.8
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 9.6e-59 231.5 149 79.2
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.5e-45 186.4 170 51.8
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 3.5e-45 186.4 304 42.4
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 7.9e-45 185.3 299 42.5
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.8e-41 174.1 125 73.6
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 1.9e-38 164.1 334 33.2
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 6.3e-34 149.1 124 62.1
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 1.3e-31 141.4 89 77.5
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 7.2e-22 109.0 76 67.1
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 2.0e-19 100.9 319 28.8
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 6.1e-13 79.3 59 66.1
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 7.2e-06 55.8 175 32.6
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 7.2e-06 55.8 175 32.6


User provided reference genes

Program Settings