Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003145 Solanum tuberosum HOM05D008744 ORTHO05D010647 3.3e-121 438.3 215 100.0
Sopen03g027820 Solanum pennellii HOM05D008744 ORTHO05D010647 9.0e-111 403.7 215 92.6
Solyc03g097080.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 8.8e-90 334.0 163 96.3
Peaxi162Scf00700g00238 Petunia axillaris HOM05D008744 ORTHO05D010647 3.5e-54 215.7 196 59.2
Peaxi162Scf01013g00008 Petunia axillaris HOM05D008744 ORTHO05D010647 3.0e-53 212.6 197 58.9
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 8.9e-50 201.1 195 52.3
Nitab4.5_0000559g0160 Nicotiana tabacum HOM05D008744 ORTHO05D010647 4.0e-42 175.6 110 76.4
Nitab4.5_0000078g0430 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.6e-41 172.9 215 47.0
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 4.9e-40 168.7 189 49.2
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 6.4e-40 168.3 197 48.7
Peaxi162Scf00000g00013 Petunia axillaris HOM05D008744 ORTHO05D010647 1.1e-36 157.5 183 47.0
Solyc03g005110.3 Solanum lycopersicum HOM05D008744 ORTHO05D010647 3.3e-36 156.0 208 45.7
PGSC0003DMG400013382 Solanum tuberosum HOM05D008744 ORTHO05D010647 4.3e-36 155.6 200 47.5
Peaxi162Scf00555g00913 Petunia axillaris HOM05D008744 ORTHO05D010647 7.3e-36 154.8 184 45.7
Sopen03g001120 Solanum pennellii HOM05D008744 ORTHO05D010647 8.1e-35 151.4 208 45.2
Nitab4.5_0006819g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.2e-33 147.5 217 44.2
Nitab4.5_0005672g0020 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.3e-32 144.1 192 41.7
Peaxi162Scf00700g00239 Petunia axillaris HOM05D008744 ORTHO05D010647 5.4e-31 138.7 141 53.2
Peaxi162Scf00270g00516 Petunia axillaris HOM05D008744 ORTHO05D010647 1.1e-28 131.0 206 39.8
Nitab4.5_0014775g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.8e-27 126.3 108 55.6
PGSC0003DMG401029222 Solanum tuberosum HOM05D008744 ORTHO05D010647 4.0e-26 122.5 222 36.9
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 5.2e-26 122.1 237 35.9
Peaxi162Scf00700g00244 Petunia axillaris HOM05D008744 ORTHO05D010647 7.6e-25 118.2 177 43.5
PGSC0003DMG400007626 Solanum tuberosum HOM05D008744 ORTHO05D010647 1.7e-24 117.1 214 37.9
Nitab4.5_0000078g0410 Nicotiana tabacum HOM05D008744 ORTHO05D010647 9.3e-23 111.3 87 62.1
Solyc09g010740.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 6.0e-22 108.6 151 45.7
Solyc06g069565.2 Solanum lycopersicum HOM05D008744 ORTHO05D010647 7.8e-22 108.2 126 42.1
Nitab4.5_0000043g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.0e-21 107.8 190 33.7
Sopen06g026860 Solanum pennellii HOM05D008744 ORTHO05D010647 5.1e-21 105.5 173 37.0
Sopen06g027470 Solanum pennellii HOM05D008744 ORTHO05D010647 1.9e-20 103.6 175 36.0
Nitab4.5_0004942g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 3.3e-20 102.8 93 54.8
Nitab4.5_0000043g0070 Nicotiana tabacum HOM05D008744 ORTHO05D010647 4.3e-20 102.4 185 33.0
Nitab4.5_0002593g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.6e-19 100.5 187 33.2
Solyc03g150141.1 Solanum lycopersicum HOM05D008744 ORTHO05D010647 2.8e-19 99.8 79 63.3
Sopen04g016220 Solanum pennellii HOM05D008744 ORTHO05D010647 4.0e-18 95.9 97 47.4
Peaxi162Scf00494g00096 Petunia axillaris HOM05D008744 ORTHO05D010647 2.0e-17 93.6 204 35.3
Nitab4.5_0008949g0050 Nicotiana tabacum HOM05D008744 ORTHO05D010647 3.4e-17 92.8 100 52.0
Sopen04g016250 Solanum pennellii HOM05D008744 ORTHO05D010647 2.4e-15 86.7 84 51.2
Sopen09g030970 Solanum pennellii HOM05D008744 ORTHO05D010647 2.7e-14 83.2 106 38.7
Nitab4.5_0000613g0220 Nicotiana tabacum HOM05D010354 ORTHO05D012840 7.4e-12 75.1 156 30.8
Sopen03g024130 Solanum pennellii HOM05D008744 ORTHO05D010647 9.6e-12 74.7 58 63.8
PGSC0003DMG402028118 Solanum tuberosum HOM05D001907 ORTHO05D015557 1.4e-10 70.9 122 32.8
Nitab4.5_0003217g0050 Nicotiana tabacum HOM05D008744 ORTHO05D015557 3.1e-10 69.7 92 38.0
Nitab4.5_0000043g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.6e-09 66.6 97 39.2
CAN.G128.123 Capsicum annuum HOM05D001907 ORTHO05D015557 1.7e-08 63.9 165 27.3
CAN.G3720.1 Capsicum annuum HOM05D010354 ORTHO05D015557 1.7e-08 63.9 165 27.3
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 2.9e-08 63.2 124 29.8
Cc02_g24850 Coffea canephora HOM05D021019 ORTHO05D010647 8.4e-08 61.6 126 33.3
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-07 60.8 128 32.0
CAN.G128.119 Capsicum annuum HOM05D001907 ORTHO05D015557 1.4e-07 60.8 164 26.8
CAN.G128.124 Capsicum annuum HOM05D001907 ORTHO05D015557 1.4e-07 60.8 164 26.8
Cc02_g27330 Coffea canephora HOM05D008744 ORTHO05D010647 1.4e-07 60.8 125 34.4
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 1.4e-07 60.8 140 29.3
Solyc09g082090.1 Solanum lycopersicum HOM05D008744 ORTHO05D010647 3.2e-07 59.7 67 40.3
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 5.5e-07 58.9 109 31.2
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 7.1e-07 58.5 110 30.9
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 9.3e-07 58.2 106 31.1
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.3e-07 58.2 88 33.0
Cc02_g13970 Coffea canephora HOM05D039367 ORTHO05D010647 9.3e-07 58.2 159 29.6
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 9.3e-07 58.2 171 28.1
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 1.2e-06 57.8 142 26.8
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 2.1e-06 57.0 135 27.4
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 2.7e-06 56.6 151 26.5
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 2.7e-06 56.6 108 27.8
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.7e-06 56.6 171 28.1
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.5e-06 56.2 119 32.8
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 6.0e-06 55.5 153 28.8
arahy.Tifrunner.gnm1.ann1.VD3B34 Arachis hypogaea HOM05D010841 ORTHO05D007789 6.0e-06 55.5 111 29.7
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.0e-06 55.5 110 29.1
Cc02_g25910 Coffea canephora HOM05D021019 ORTHO05D010647 6.0e-06 55.5 98 31.6
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 6.0e-06 55.5 135 27.4
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 6.0e-06 55.5 135 27.4
arahy.Tifrunner.gnm1.ann1.M6PJBU Arachis hypogaea HOM05D010841 ORTHO05D007789 7.9e-06 55.1 115 28.7
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.9e-06 55.1 119 31.9
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 7.9e-06 55.1 171 27.5


User provided reference genes

Program Settings