Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 2.9e-129 465.3 250 100.0
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.5e-125 453.0 250 97.6
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 9.8e-125 450.3 250 97.2
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 1.1e-102 377.1 254 83.9
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 2.9e-84 315.8 263 71.9
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 5.3e-62 241.9 262 59.9
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 7.9e-58 228.0 176 75.0
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 5.1e-49 198.7 268 52.6
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 1.5e-48 197.2 274 54.0
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 2.5e-48 196.4 238 55.9
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 9.7e-48 194.5 174 68.4
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 2.8e-47 193.0 248 53.6
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 1.8e-46 190.3 268 51.1
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 2.4e-46 189.9 264 50.4
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 5.3e-46 188.7 178 62.9
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 1.2e-45 187.6 183 60.7
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 7.7e-45 184.9 146 71.9
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 1.7e-44 183.7 170 63.5
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.2e-44 183.3 170 63.5
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 2.5e-43 179.9 275 48.0
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 9.4e-43 177.9 182 59.9
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 1.2e-42 177.6 275 49.5
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 2.7e-42 176.4 178 60.1
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 4.6e-42 175.6 268 51.1
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 1.0e-41 174.5 240 50.4
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 3.9e-41 172.6 144 68.1
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 3.9e-41 172.6 249 50.2
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 3.9e-41 172.6 178 61.8
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 5.1e-41 172.2 197 59.4
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 6.7e-41 171.8 186 58.1
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 6.7e-41 171.8 144 68.8
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 8.8e-41 171.4 228 53.1
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 1.1e-40 171.0 200 54.0
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 1.5e-40 170.6 175 58.3
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 1.5e-40 170.6 146 68.5
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.5e-40 170.6 146 68.5
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 1.5e-40 170.6 157 64.3
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 1.5e-40 170.6 146 67.8
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 2.6e-40 169.9 161 64.6
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 2.6e-40 169.9 184 58.7
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 3.3e-40 169.5 235 51.5
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.4e-40 169.1 146 68.5
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 1.3e-39 167.5 234 52.1
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 2.8e-39 166.4 232 52.2
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 3.7e-39 166.0 252 48.0
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 3.7e-39 166.0 188 58.0
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 4.8e-39 165.6 250 45.2
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 6.3e-39 165.2 233 48.5
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 6.3e-39 165.2 154 63.6
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 1.4e-38 164.1 159 59.7
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 1.4e-38 164.1 218 51.4
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 1.8e-38 163.7 145 62.8
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 2.4e-38 163.3 182 56.6
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 2.4e-38 163.3 256 45.3
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 4.1e-38 162.5 236 51.3
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.1e-38 162.5 254 48.4
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 6.9e-38 161.8 264 47.7
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.5e-37 160.6 151 62.3
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 2.0e-37 160.2 144 63.2
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 2.6e-37 159.8 124 73.4
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 4.5e-37 159.1 275 45.8
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 5.9e-37 158.7 192 53.1
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 7.7e-37 158.3 141 63.1
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 7.7e-37 158.3 229 49.8
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 1.0e-36 157.9 160 57.5
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.3e-36 157.5 179 53.6
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.3e-36 157.5 179 55.3
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 1.7e-36 157.1 149 62.4
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 2.2e-36 156.8 264 44.7
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 2.2e-36 156.8 240 50.4
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 2.2e-36 156.8 126 70.6
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 3.8e-36 156.0 229 48.5
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 5.0e-36 155.6 177 57.1
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 8.5e-36 154.8 184 54.3
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 8.5e-36 154.8 252 47.2
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 1.4e-35 154.1 211 49.8
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 1.9e-35 153.7 154 60.4
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 1.9e-35 153.7 158 58.9
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 1.9e-35 153.7 154 60.4
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 1.9e-35 153.7 158 58.9
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 1.9e-35 153.7 257 45.1
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 1.9e-35 153.7 224 49.1
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 2.5e-35 153.3 251 45.0
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 9.4e-35 151.4 186 53.2
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.2e-34 151.0 257 45.9
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 3.6e-34 149.4 132 62.9
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 6.1e-34 148.7 270 42.2
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 7.9e-34 148.3 277 41.2
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 2.6e-32 143.3 156 56.4
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 1.7e-31 140.6 223 46.6
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 4.8e-31 139.0 134 60.4
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.1e-30 137.9 161 52.8
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.4e-30 137.5 149 57.0
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 1.4e-30 137.5 134 59.7
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 1.4e-30 137.5 134 59.7
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 4.1e-30 136.0 272 43.4
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 1.6e-29 134.0 123 59.3
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 2.0e-29 133.7 218 45.0
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 2.6e-29 133.3 209 47.8
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 4.5e-29 132.5 218 45.4
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 4.5e-29 132.5 218 45.4
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.7e-28 130.6 238 43.7
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 3.2e-27 126.3 225 44.0
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 3.1e-22 109.8 145 51.0
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.8e-20 102.8 96 63.5
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 6.5e-20 102.1 94 62.8
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.1e-19 101.3 94 64.9
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 5.5e-19 99.0 140 40.7
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 8.8e-17 91.7 104 50.0
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.4e-16 89.7 81 61.7
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.4e-16 89.7 81 61.7
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.7e-15 87.4 60 75.0
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 2.8e-15 86.7 153 37.3
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 8.3e-15 85.1 148 37.8
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.2e-13 81.3 59 71.2
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 2.7e-13 80.1 113 51.3
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 4.5e-13 79.3 56 71.4
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 2.3e-12 77.0 55 72.7
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 8.6e-12 75.1 55 70.9
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 8.0e-10 68.6 50 72.0
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 3.4e-08 63.2 85 41.2


User provided reference genes

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