Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003049 Solanum tuberosum HOM05D005348 ORTHO05D006635 5.0e-111 404.4 203 100.0
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 1.9e-102 375.9 204 89.7
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 1.2e-91 340.1 206 85.9
Peaxi162Scf00714g00422 Petunia axillaris HOM05D005348 ORTHO05D006635 1.7e-90 336.3 206 86.4
Nitab4.5_0002853g0050 Nicotiana tabacum HOM05D005348 ORTHO05D006635 1.3e-79 300.1 198 77.8
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 3.1e-68 262.3 174 77.0
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 3.0e-47 192.6 197 51.8
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 5.6e-46 188.3 205 52.7
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 1.8e-44 183.3 205 48.3
MSTRG.13824 Avicennia marina HOM05D005348 ORTHO05D006635 5.1e-39 165.2 172 55.8
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 6.7e-39 164.9 205 52.7
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 3.7e-37 159.1 168 51.8
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 1.5e-35 153.7 204 44.6
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 1.1e-33 147.5 165 47.3
Atru.chr9.1551 Acer truncatum HOM05D005348 ORTHO05D006635 1.2e-32 144.1 159 50.9
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 3.5e-32 142.5 202 43.1
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 3.5e-32 142.5 205 42.0
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 6.7e-31 138.3 197 43.7
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.1e-30 137.5 165 47.3
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 1.5e-30 137.1 165 49.7
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 2.5e-30 136.3 165 47.9
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.3e-30 136.0 165 49.7
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 4.3e-30 135.6 168 53.0
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 8.2e-29 131.3 162 53.1
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 1.2e-27 127.5 210 40.5
Gohir.D11G021100 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.5e-27 127.1 178 46.6
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 2.6e-27 126.3 191 40.8
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 3.4e-27 125.9 201 44.8
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 7.6e-27 124.8 166 49.4
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 2.2e-26 123.2 165 49.1
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 2.9e-26 122.9 196 39.8
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 2.9e-26 122.9 163 44.8
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 3.8e-26 122.5 163 49.7
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 6.5e-26 121.7 192 41.1
FAN08G2219 Fragaria x ananassa HOM05D005348 ORTHO05D006635 8.4e-26 121.3 157 46.5
Glyma.09G081380 Glycine max HOM05D005348 ORTHO05D006635 8.4e-26 121.3 174 42.5
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 8.4e-26 121.3 168 45.2
FAN04G3017 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.2e-25 119.4 146 53.4
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 3.2e-25 119.4 209 42.1
Prupe.8G039400 Prunus persica HOM05D005348 ORTHO05D006635 5.5e-25 118.6 149 51.7
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 5.5e-25 118.6 174 47.1
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 2.7e-24 116.3 126 57.9
unitig_26.g9696 Utricularia gibba HOM05D005348 ORTHO05D006635 3.5e-24 115.9 134 52.2
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 1.3e-23 114.0 139 46.8
FAN04G2632 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.3e-23 114.0 138 47.1
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 1.8e-23 113.6 145 51.7
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 3.9e-23 112.5 134 47.8
Hund02678 Selenicereus undatus HOM05D005348 ORTHO05D006635 1.1e-22 110.9 204 41.2
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 1.9e-22 110.2 195 36.4
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 5.7e-22 108.6 179 39.1
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 5.7e-22 108.6 134 46.3
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 5.7e-22 108.6 140 46.4
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 9.7e-22 107.8 153 46.4
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 1.3e-21 107.5 82 63.4
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 1.6e-21 107.1 171 39.2
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 2.8e-21 106.3 71 64.8
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 4.8e-21 105.5 68 70.6
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 6.3e-21 105.1 95 55.8
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 8.2e-21 104.8 87 58.6
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 6.9e-20 101.7 89 55.1
VMungo1215G1628 Vigna mungo HOM05D005348 ORTHO05D006635 9.0e-20 101.3 208 36.1
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 1.5e-19 100.5 164 40.9
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 2.6e-19 99.8 174 43.1
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 2.6e-19 99.8 175 40.6
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 2.6e-19 99.8 135 43.0
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 7.7e-19 98.2 70 65.7
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 1.0e-18 97.8 207 35.3
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 1.3e-18 97.4 130 43.1
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 1.3e-18 97.4 82 61.0
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 1.7e-18 97.1 57 73.7
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 1.7e-18 97.1 57 73.7
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 1.7e-18 97.1 57 73.7
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 1.7e-18 97.1 57 73.7
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 2.9e-18 96.3 70 61.4
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 3.8e-18 95.9 81 56.8
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 5.0e-18 95.5 80 60.0
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 5.0e-18 95.5 167 41.9
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 8.5e-18 94.7 125 41.6
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 8.5e-18 94.7 168 39.9
Gohir.A11G021400 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.1e-17 94.4 174 37.9
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 2.5e-17 93.2 88 53.4
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 3.2e-17 92.8 160 40.6
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 5.5e-17 92.0 90 50.0
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 6.1e-16 88.6 75 53.3
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 1.4e-15 87.4 173 41.0
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 1.4e-15 87.4 174 41.4
ATR0757G119 Amborella trichopoda HOM05D005348 ORTHO05D006635 3.9e-15 85.9 54 68.5
COL.COLO4_05261 Corchorus olitorius HOM05D005348 ORTHO05D006635 3.9e-15 85.9 171 38.6
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 2.0e-14 83.6 145 36.6
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 1.8e-12 77.0 70 52.9
FvH4_5g01630 Fragaria vesca HOM05D005348 ORTHO05D006635 2.6e-11 73.2 65 58.5
HPP92_004952 Vanilla planifolia HOM05D005348 ORTHO05D006635 1.4e-09 67.4 188 28.2


User provided reference genes

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