Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002843 Solanum tuberosum HOM05D004568 ORTHO05D005343 6.3e-155 550.8 298 100.0
Sopen04g001970 Solanum pennellii HOM05D004568 ORTHO05D005343 1.0e-136 490.3 300 90.7
Solyc04g005920.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 1.7e-136 489.6 300 90.7
Peaxi162Scf00208g00131 Petunia axillaris HOM05D004568 ORTHO05D005343 1.6e-105 386.7 343 66.8
Nitab4.5_0001554g0060 Nicotiana tabacum HOM05D004568 ORTHO05D005343 5.6e-103 378.3 340 66.2
Nitab4.5_0004681g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 4.0e-101 372.1 341 64.8
Oeu033529.1 Olea europaea HOM05D004568 ORTHO05D005343 2.4e-61 240.0 344 45.6
Hma1.2p1_1424F.1_g282720 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 4.1e-61 239.2 351 43.9
Dinv16554 Davidia involucrata HOM05D004568 ORTHO05D005343 5.3e-61 238.8 347 49.6
CSS0002717 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 5.5e-58 228.8 318 51.9
Solyc05g010450.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 8.2e-54 214.9 330 46.7
Sopen05g006240 Solanum pennellii HOM05D004568 ORTHO05D005343 8.2e-54 214.9 330 46.7
Cfa008803 Carpinus fangiana HOM05D004568 ORTHO05D005343 4.5e-52 209.1 382 38.5
Hma1.2p1_1459F.1_g284900 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 7.7e-52 208.4 327 41.9
CiPaw.05G118300 Carya illinoinensis HOM05D004568 ORTHO05D005343 3.8e-51 206.1 383 42.0
SalBow8G3235 Salvia bowleyana HOM05D004568 ORTHO05D005343 3.8e-51 206.1 319 44.2
SalBow8G5572 Salvia bowleyana HOM05D004568 ORTHO05D005343 3.8e-51 206.1 319 44.2
Migut.L01125 Erythranthe guttata HOM05D004568 ORTHO05D005343 1.1e-50 204.5 362 42.0
PGSC0003DMG400007516 Solanum tuberosum HOM05D004568 ORTHO05D005343 4.2e-50 202.6 333 45.3
Potri.010G133600 Populus trichocarpa HOM05D004568 ORTHO05D005343 1.6e-49 200.7 389 42.9
ECA246G3306 Erigeron canadensis HOM05D004568 ORTHO05D005343 2.1e-49 200.3 345 49.6
CiPaw.06G097400 Carya illinoinensis HOM05D004568 ORTHO05D005343 4.7e-49 199.1 390 41.0
Potri.008G109600 Populus trichocarpa HOM05D004568 ORTHO05D005343 4.7e-49 199.1 390 42.3
Potri.T062072 Populus trichocarpa HOM05D004568 ORTHO05D005343 4.7e-49 199.1 390 42.3
Thecc.02G315200 Theobroma cacao HOM05D004568 ORTHO05D005343 4.7e-49 199.1 383 38.6
Prupe.1G299900 Prunus persica HOM05D004568 ORTHO05D005343 8.0e-49 198.4 408 39.7
Duzib251G0342 Durio zibethinus HOM05D004568 ORTHO05D005343 2.3e-48 196.8 391 41.2
ClCG05G023290 Citrullus lanatus HOM05D004568 ORTHO05D005343 4.0e-48 196.1 367 44.1
Sed0022479 Sechium edule HOM05D004568 ORTHO05D005343 5.2e-48 195.7 360 41.4
Lsat_1_v5_gn_3_58841 Lactuca sativa HOM05D004568 ORTHO05D005343 8.8e-48 194.9 343 47.5
Thecc.09G210800 Theobroma cacao HOM05D004568 ORTHO05D005343 8.8e-48 194.9 385 41.6
QL03p044380 Quercus lobata HOM05D004568 ORTHO05D005343 2.0e-47 193.7 386 38.1
MD13G1052200 Malus domestica HOM05D004568 ORTHO05D005343 5.7e-47 192.2 376 38.8
CsaV3_5G033720 Cucumis sativus L. HOM05D004568 ORTHO05D005343 7.5e-47 191.8 374 43.0
MELO3C012188.2 Cucumis melo HOM05D004568 ORTHO05D005343 9.8e-47 191.4 366 43.4
Duzib268G1242 Durio zibethinus HOM05D004568 ORTHO05D005343 1.3e-46 191.0 383 42.0
DCAR_026699 Daucus carota HOM05D004568 ORTHO05D005343 1.7e-46 190.7 352 43.8
Manes.06G076600 Manihot esculenta HOM05D004568 ORTHO05D005343 3.7e-46 189.5 363 39.9
Sabra10G0102200 Salix brachista HOM05D004568 ORTHO05D005343 6.3e-46 188.7 394 40.6
Cpa.g.sc1.257 Carica papaya HOM05D004568 ORTHO05D005343 1.1e-45 188.0 384 39.3
CANSAT64G0418 Cannabis sativa HOM05D004568 ORTHO05D005343 1.4e-45 187.6 411 36.5
MD16G1057700 Malus domestica HOM05D004568 ORTHO05D005343 3.1e-45 186.4 382 35.9
Nitab4.5_0012448g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 5.4e-45 185.7 215 57.7
CSS0045744 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 4.5e-44 182.6 332 41.3
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 5.9e-44 182.2 269 45.7
VMungo1215G2036 Vigna mungo HOM05D004568 ORTHO05D005343 1.0e-43 181.4 382 39.5
Lj2g0022626 Lotus japonicus HOM05D004568 ORTHO05D005343 1.3e-43 181.0 376 38.0
Duzib168G1705 Durio zibethinus HOM05D004568 ORTHO05D005343 2.9e-43 179.9 388 40.2
Gohir.A03G108200 Gossypium hirsutum HOM05D004568 ORTHO05D005343 2.9e-43 179.9 392 42.1
HanXRQChr17g0551111 Helianthus annuus HOM05D004568 ORTHO05D005343 2.9e-43 179.9 342 45.6
HanXRQChr17g0551511 Helianthus annuus HOM05D004568 ORTHO05D005343 2.9e-43 179.9 342 45.6
Sc04g0007050 Simmondsia chinensis HOM05D004568 ORTHO05D005343 2.9e-43 179.9 340 38.2
Ciclev10033580m.g Citrus clementina HOM05D004568 ORTHO05D005343 3.8e-43 179.5 391 40.4
Atru.chr11.1442 Acer truncatum HOM05D004568 ORTHO05D005343 1.1e-42 177.9 386 37.8
Atru.chr11.1472 Acer truncatum HOM05D004568 ORTHO05D005343 1.1e-42 177.9 386 37.8
Sabra08G0083400 Salix brachista HOM05D004568 ORTHO05D005343 1.5e-42 177.6 373 38.6
Gorai.005G149300 Gossypium raimondii HOM05D004568 ORTHO05D005343 2.5e-42 176.8 393 42.0
FAN07G0048 Fragaria x ananassa HOM05D004568 ORTHO05D005343 4.2e-42 176.0 392 38.5
TWI79G0507 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 5.5e-42 175.6 363 36.4
Manes.14G094400 Manihot esculenta HOM05D004568 ORTHO05D005343 7.2e-42 175.3 363 41.6
Lalb_Chr10g0099511 Lupinus albus HOM05D004568 ORTHO05D005343 1.6e-41 174.1 366 41.5
SGA_v2.0_scaffold36G14507 Striga asiatica HOM05D004568 ORTHO05D005343 1.6e-41 174.1 305 41.3
TWI75G0122 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 1.6e-41 174.1 361 36.0
Gohir.D02G133400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 2.1e-41 173.7 394 41.6
RcHm_v2.0_Chr4g0436671 Rosa chinensis HOM05D004568 ORTHO05D005343 2.1e-41 173.7 397 38.3
FAN12G0798 Fragaria x ananassa HOM05D004568 ORTHO05D005343 2.7e-41 173.3 399 37.8
FvH4_4g28580 Fragaria vesca HOM05D004568 ORTHO05D005343 3.6e-41 172.9 400 37.8
FAN22G1274 Fragaria x ananassa HOM05D004568 ORTHO05D005343 3.6e-41 172.9 400 37.8
Cc11_g11080 Coffea canephora HOM05D004568 ORTHO05D005343 8.0e-41 171.8 324 44.8
FAN17G1809 Fragaria x ananassa HOM05D004568 ORTHO05D005343 8.0e-41 171.8 399 37.8
COL.COLO4_34999 Corchorus olitorius HOM05D004568 ORTHO05D005343 1.0e-40 171.4 393 36.6
TWI31G1373 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 6.8e-40 168.7 328 37.2
COL.COLO4_27716 Corchorus olitorius HOM05D004568 ORTHO05D005343 2.0e-39 167.2 386 38.1
SGA_v2.0_scaffold16G07859 Striga asiatica HOM05D004568 ORTHO05D005343 2.6e-39 166.8 313 39.6
Rhsim09G0116100 Rhododendron simsii HOM05D004568 ORTHO05D005343 4.4e-39 166.0 335 40.3
Rhsim09G0116400 Rhododendron simsii HOM05D004568 ORTHO05D005343 9.8e-39 164.9 334 39.5
GSVIVG01012027001 Vitis vinifera HOM05D004568 ORTHO05D005343 8.3e-38 161.8 246 43.5
DCAR_030135 Daucus carota HOM05D004568 ORTHO05D005343 9.2e-37 158.3 320 37.8
THA.LOC104824044 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 7.7e-36 155.2 241 48.5
TPR.G2653 Trifolium pratense HOM05D004568 ORTHO05D005343 1.7e-35 154.1 387 37.5
Ca_05120_v3 Cicer arietinum L. HOM05D004568 ORTHO05D005343 4.3e-34 149.4 375 38.4
Gohir.A12G157850 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.2e-33 147.9 353 34.0
Gohir.A12G157951 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.2e-33 147.9 353 34.0
Gohir.D12G160800 Gossypium hirsutum HOM05D004568 ORTHO05D005343 2.1e-33 147.1 353 34.0
HanXRQChr12g0365221 Helianthus annuus HOM05D004568 ORTHO05D005343 8.0e-33 145.2 337 35.9
Actinidia37881 Actinidia chinensis HOM05D004568 ORTHO05D005343 1.4e-32 144.4 235 46.8
Gohir.D13G217400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.8e-32 144.1 378 37.3
Gorai.013G247900 Gossypium raimondii HOM05D004568 ORTHO05D005343 1.8e-32 144.1 378 37.3
Phvul.003G034500 Phaseolus vulgaris HOM05D004568 ORTHO05D005343 8.9e-32 141.7 303 36.0
Psat2g096280 Pisum sativum HOM05D004568 ORTHO05D005343 1.2e-31 141.4 369 38.2
Gorai.008G173800 Gossypium raimondii HOM05D004568 ORTHO05D005343 4.4e-31 139.4 356 32.9
Nn3g17622 Nelumbo nucifera HOM05D004568 ORTHO05D005343 4.4e-31 139.4 343 34.7
PGR119G0824 Punica granatum HOM05D004568 ORTHO05D005343 1.3e-30 137.9 403 36.0
TAR374G1393 Trochodendron aralioides HOM05D004568 ORTHO05D005343 1.7e-30 137.5 342 33.6
PSO063G5818 Papaver somniferum HOM05D004568 ORTHO05D005343 2.2e-30 137.1 388 35.3
THA.LOC104805234 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 2.9e-30 136.7 250 44.8
PSO782G5402 Papaver somniferum HOM05D004568 ORTHO05D005343 3.7e-30 136.3 378 35.4
vmacro10495 Vaccinium macrocarpon HOM05D004568 ORTHO05D005343 1.8e-29 134.0 336 37.2
Aa31LG2G6720 Aethionema arabicum HOM05D004568 ORTHO05D005343 2.4e-29 133.7 246 46.7
Gohir.A13G213600 Gossypium hirsutum HOM05D004568 ORTHO05D005343 4.1e-29 132.9 378 37.6
Medtr6g472100 Medicago truncatula HOM05D004568 ORTHO05D005343 4.1e-29 132.9 371 37.2
HanXRQChr08g0214641 Helianthus annuus HOM05D004568 ORTHO05D005343 2.0e-28 130.6 333 36.6
HanXRQChr08g0214671 Helianthus annuus HOM05D004568 ORTHO05D005343 2.0e-28 130.6 333 36.6
Lj3P1023T52 Lonicera japonica HOM05D004568 ORTHO05D005343 2.7e-28 130.2 185 52.4
BolC9t56047H Brassica oleracea HOM05D004568 ORTHO05D005343 1.0e-27 128.3 233 43.3
C09p31920 Brassica napus HOM05D004568 ORTHO05D005343 3.9e-27 126.3 231 43.7
Glyma.02G128700 Glycine max HOM05D004568 ORTHO05D005343 3.9e-27 126.3 408 31.6
BcaC04g21427 Brassica carinata HOM05D004568 ORTHO05D005343 5.0e-27 125.9 220 40.9
Lsat_1_v5_gn_8_37860 Lactuca sativa HOM05D004568 ORTHO05D005343 5.0e-27 125.9 354 39.8
Thhalv10004268m.g Eutrema salsugineum HOM05D004568 ORTHO05D005343 8.6e-27 125.2 235 45.1
A09p24900 Brassica napus HOM05D004568 ORTHO05D005343 4.3e-26 122.9 349 33.2
AT3G25590 Arabidopsis thaliana HOM05D004568 ORTHO05D005343 5.6e-26 122.5 237 41.4
EL10Ac6g14584 Beta vulgaris HOM05D004568 ORTHO05D005343 9.5e-26 121.7 352 35.8
Eucgr.G02393 Eucalyptus grandis HOM05D004568 ORTHO05D005343 9.5e-26 121.7 257 42.0
AUR62007782 Chenopodium quinoa HOM05D004568 ORTHO05D005343 2.8e-25 120.2 367 35.4
Aqoxy3G03818 Aquilegia oxysepala HOM05D004568 ORTHO05D005343 8.0e-25 118.6 378 33.6
Glyma.04G152800 Glycine max HOM05D004568 ORTHO05D005343 1.4e-24 117.9 407 31.2
AL5G14100 Arabidopsis lyrata HOM05D004568 ORTHO05D005343 4.0e-24 116.3 270 37.0
unitig_747.g21193 Utricularia gibba HOM05D004568 ORTHO05D005343 4.0e-24 116.3 335 31.3
Carub.0005s0337 Capsella rubella HOM05D004568 ORTHO05D005343 5.2e-24 115.9 216 43.1
A02p33910 Brassica napus HOM05D004568 ORTHO05D005343 2.6e-23 113.6 229 43.2
BolC2t11302H Brassica oleracea HOM05D004568 ORTHO05D005343 2.6e-23 113.6 229 38.4
BraA02t08408Z Brassica rapa HOM05D004568 ORTHO05D005343 2.6e-23 113.6 229 43.2
TAR622G0675 Trochodendron aralioides HOM05D004568 ORTHO05D005343 5.8e-23 112.5 246 39.4
BraA06t27185Z Brassica rapa HOM05D004568 ORTHO05D005343 7.5e-23 112.1 223 36.3
A06p42720 Brassica napus HOM05D004568 ORTHO05D005343 9.8e-23 111.7 226 36.7
BraA09t38078Z Brassica rapa HOM05D004568 ORTHO05D005343 3.7e-22 109.8 204 39.7
BcaC03g17273 Brassica carinata HOM05D004568 ORTHO05D005343 6.4e-22 109.0 209 37.3
BcaC04g21428 Brassica carinata HOM05D004568 ORTHO05D005343 8.3e-22 108.6 315 33.7
arahy.Tifrunner.gnm1.ann1.35X7C5 Arachis hypogaea HOM05D004568 ORTHO05D005343 4.1e-21 106.3 413 28.3
BcaC06g33977 Brassica carinata HOM05D004568 ORTHO05D005343 1.6e-20 104.4 231 36.8
C07p34410 Brassica napus HOM05D004568 ORTHO05D005343 1.6e-20 104.4 231 36.8
BolC7t43969H Brassica oleracea HOM05D004568 ORTHO05D005343 1.6e-20 104.4 231 36.8
Haze_11818 Corylus avellana HOM05D004568 ORTHO05D005343 1.6e-20 104.4 225 35.6
AUR62039200 Chenopodium quinoa HOM05D004568 ORTHO05D005343 7.8e-20 102.1 395 31.4
CDE04G2972 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 1.0e-19 101.7 275 28.4
arahy.Tifrunner.gnm1.ann1.Y3DNXR Arachis hypogaea HOM05D004568 ORTHO05D005343 2.3e-19 100.5 343 28.3
Ah.04g164810 Amaranthus hybridus HOM05D004568 ORTHO05D005343 5.0e-19 99.4 322 32.3
AUR62019434 Chenopodium quinoa HOM05D000052 ORTHO05D000046 5.6e-18 95.9 290 33.8
Sp2g14860 Schrenkiella parvula HOM05D004568 ORTHO05D005343 5.6e-18 95.9 246 41.5
BcaB07g30637 Brassica carinata HOM05D004568 ORTHO05D005343 5.2e-16 89.4 229 40.6
BcaB07g30266 Brassica carinata HOM05D004568 ORTHO05D005343 6.8e-16 89.0 221 33.9
C02p52170 Brassica napus HOM05D004568 ORTHO05D005343 4.4e-15 86.3 207 33.3
Haze_11819 Corylus avellana HOM05D004568 ORTHO05D005343 7.5e-15 85.5 115 43.5
ECA233G1390 Erigeron canadensis HOM05D004568 ORTHO05D005343 4.9e-14 82.8 245 34.7
Actinidia30170 Actinidia chinensis HOM05D004568 ORTHO05D005343 2.7e-12 77.0 93 57.0
BcaC06g31131 Brassica carinata HOM05D004568 ORTHO05D005343 4.6e-12 76.3 236 36.9
SGA_v2.0_scaffold14G06784 Striga asiatica HOM05D001314 ORTHO05D001165 1.9e-10 70.9 238 30.7
unitig_26.g10277 Utricularia gibba HOM05D004568 ORTHO05D005343 1.1e-08 65.1 171 30.4
CDE04G2720 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 1.8e-08 64.3 233 30.5
unitig_699.g19898 Utricularia gibba HOM05D004568 ORTHO05D005343 8.9e-08 62.0 114 37.7
Hma1.2p1_0337F.1_g129430 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 7.6e-07 58.9 152 38.2


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