Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 5.2e-109 397.9 226 100.0
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.4e-90 336.7 239 83.3
Sopen09g003550 Solanum pennellii HOM05D005432 ORTHO05D004599 2.6e-76 289.3 189 87.8
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 8.4e-75 284.3 227 70.0
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 6.0e-73 278.1 230 70.9
PGSC0003DMG400012978 Solanum tuberosum HOM05D005432 ORTHO05D004599 7.3e-71 271.2 182 80.8
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.3e-62 243.8 204 67.6
Sopen09g003530 Solanum pennellii HOM05D005432 ORTHO05D004599 8.1e-62 241.1 181 76.8
Solyc09g008740.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.8e-61 240.0 179 73.2
Sopen09g003540 Solanum pennellii HOM05D005432 ORTHO05D004599 5.8e-60 235.0 187 70.6
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.3e-59 233.8 202 61.9
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 2.2e-59 233.0 223 61.0
CAN.G1830.2 Capsicum annuum HOM05D005432 ORTHO05D004599 2.5e-58 229.6 303 51.5
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 3.2e-58 229.2 242 58.7
CAN.G1830.1 Capsicum annuum HOM05D005432 ORTHO05D004599 1.2e-57 227.3 181 69.1
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 2.2e-51 206.5 198 64.6
Nitab4.5_0000680g0150 Nicotiana tabacum HOM05D005432 ORTHO05D004599 3.8e-51 205.7 179 64.2
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 4.1e-29 132.5 190 47.9
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 1.6e-25 120.6 195 43.1
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.6e-25 120.6 191 41.9
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 1.0e-24 117.9 183 45.4
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 4.4e-23 112.5 194 42.3
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 1.1e-21 107.8 220 40.5
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 1.0e-19 101.3 202 37.6
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.3e-19 100.9 232 36.6
ECA232G0649 Erigeron canadensis HOM05D005432 ORTHO05D004599 2.7e-17 93.2 199 36.2
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 4.7e-17 92.4 199 37.2
Migut.L00424 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.0e-16 91.3 189 36.0
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 1.0e-16 91.3 196 35.7
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 1.4e-16 90.9 193 39.4
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 1.4e-16 90.9 197 36.0
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 4.0e-16 89.4 203 35.0
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 4.0e-16 89.4 203 35.0
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 5.2e-16 89.0 203 35.5
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 6.8e-16 88.6 188 35.1
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 8.8e-16 88.2 196 35.7
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.5e-15 87.4 203 35.5
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 2.0e-15 87.0 203 33.5
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 2.6e-15 86.7 215 31.2
Lsat_1_v5_gn_4_160141 Lactuca sativa HOM05D005432 ORTHO05D004599 3.4e-15 86.3 209 33.0
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 4.4e-15 85.9 188 33.0
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 4.4e-15 85.9 188 33.0
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 7.5e-15 85.1 203 34.0
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 9.8e-15 84.7 188 34.6
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.3e-14 84.3 220 31.8
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.3e-14 84.3 192 35.4
Oeu011980.1 Olea europaea HOM05D005432 ORTHO05D004599 2.8e-14 83.2 202 33.7
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 3.7e-14 82.8 189 34.9
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 3.7e-14 82.8 205 31.7
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 6.3e-14 82.0 189 34.4
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 6.3e-14 82.0 188 34.0
Migut.L00423 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.1e-13 81.3 190 35.3
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 1.4e-13 80.9 189 33.9
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 1.4e-13 80.9 194 30.9
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.4e-13 80.9 195 34.9
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 2.4e-13 80.1 212 34.9
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 4.1e-13 79.3 199 35.2
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 7.0e-13 78.6 104 45.2
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 1.2e-12 77.8 184 33.7
Hma1.2p1_0424F.1_g150570 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 2.0e-12 77.0 122 46.7
PGR102G0812 Punica granatum HOM05D005432 ORTHO05D004599 2.0e-12 77.0 202 32.2
FAN28G2020 Fragaria x ananassa HOM05D005432 ORTHO05D004599 4.5e-12 75.9 98 39.8
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 4.5e-12 75.9 90 45.6
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 1.0e-11 74.7 188 34.6
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 1.3e-11 74.3 189 33.3
SGA_v2.0_scaffold15G07481 Striga asiatica HOM05D005432 ORTHO05D004599 1.7e-11 73.9 200 32.5
Rhsim08G0092400 Rhododendron simsii HOM05D005432 ORTHO05D004599 2.9e-11 73.2 195 34.9
TAR376G0425 Trochodendron aralioides HOM05D005432 ORTHO05D004599 3.8e-11 72.8 220 33.2
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 5.0e-11 72.4 190 32.6
Lsat_1_v5_gn_4_160241 Lactuca sativa HOM05D005432 ORTHO05D004599 6.5e-11 72.0 202 31.7
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 8.5e-11 71.6 188 30.3
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 8.5e-11 71.6 92 45.7
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 1.1e-10 71.2 184 31.0
ECA232G3481 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.5e-10 70.9 192 34.9
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 1.9e-10 70.5 224 30.4
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 2.5e-10 70.1 97 40.2
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 5.5e-10 68.9 171 33.3
Atru.chr3.1044 Acer truncatum HOM05D005432 ORTHO05D004599 7.2e-10 68.6 218 28.4
VMungo0251G2573 Vigna mungo HOM05D005432 ORTHO05D004599 7.2e-10 68.6 87 43.7
Lj4g0003965 Lotus japonicus HOM05D005432 ORTHO05D004599 4.7e-09 65.9 183 32.2
Prupe.6G218200 Prunus persica HOM05D005432 ORTHO05D004599 1.0e-08 64.7 95 44.2
Ca_22097_v3 Cicer arietinum L. HOM05D005432 ORTHO05D004599 1.8e-08 63.9 53 52.8
Glyma.05G107500 Glycine max HOM05D005432 ORTHO05D004599 1.8e-08 63.9 57 50.9
Lsat_1_v5_gn_4_160281 Lactuca sativa HOM05D005432 ORTHO05D004599 2.3e-08 63.5 81 45.7
Oeu021446.1 Olea europaea HOM05D005432 ORTHO05D004599 4.0e-08 62.8 193 31.1
CiPaw.01G002700 Carya illinoinensis HOM05D005432 ORTHO05D004599 5.2e-08 62.4 93 44.1
MD02G1188700 Malus domestica HOM05D005432 ORTHO05D004599 5.2e-08 62.4 92 37.0
Nitab4.5_0016059g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 5.2e-08 62.4 131 35.9
Phvul.003G233700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 8.8e-08 61.6 54 51.9
ClCG01G017720 Citrullus lanatus HOM05D005432 ORTHO05D004599 1.5e-07 60.8 193 29.0
Haze_15264 Corylus avellana HOM05D005432 ORTHO05D004599 1.5e-07 60.8 57 54.4
Medtr4g097360 Medicago truncatula HOM05D005432 ORTHO05D004599 2.6e-07 60.1 112 35.7
Sed0012898 Sechium edule HOM05D005432 ORTHO05D004599 3.4e-07 59.7 91 38.5
Eucgr.H02317 Eucalyptus grandis HOM05D005432 ORTHO05D004599 4.4e-07 59.3 53 50.9
Gohir.A11G048800 Gossypium hirsutum HOM05D005432 ORTHO05D004599 4.4e-07 59.3 99 39.4
Gohir.D11G052400 Gossypium hirsutum HOM05D005432 ORTHO05D004599 5.7e-07 58.9 95 38.9
Gorai.007G056800 Gossypium raimondii HOM05D005432 ORTHO05D004599 5.7e-07 58.9 95 38.9
MELO3C007650.2 Cucumis melo HOM05D005432 ORTHO05D004599 7.5e-07 58.5 189 28.0
Eucgr.H02318 Eucalyptus grandis HOM05D005432 ORTHO05D004599 7.5e-07 58.5 62 45.2
Nitab4.5_0000036g0120 Nicotiana tabacum HOM05D005432 ORTHO05D004599 7.5e-07 58.5 158 31.6
VMungo1215G3148 Vigna mungo HOM05D005432 ORTHO05D004599 9.8e-07 58.2 51 51.0
AL7G12970 Arabidopsis lyrata HOM05D009364 ORTHO05D004599 1.3e-06 57.8 81 39.5
TPR.G24244 Trifolium pratense HOM05D005432 ORTHO05D004599 1.3e-06 57.8 52 53.8
Medtr4g097350 Medicago truncatula HOM05D005432 ORTHO05D004599 1.7e-06 57.4 54 51.9
Phvul.002G009700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 1.7e-06 57.4 51 51.0
Medtr4g097280 Medicago truncatula HOM05D005432 ORTHO05D004599 2.2e-06 57.0 112 35.7
BcaC01g00392 Brassica carinata HOM05D009364 ORTHO05D004599 4.9e-06 55.8 91 38.5
C03p79220 Brassica napus HOM05D009364 ORTHO05D004599 4.9e-06 55.8 91 38.5
BolC3t20164H Brassica oleracea HOM05D009364 ORTHO05D004599 4.9e-06 55.8 91 38.5
BraA08t34242Z Brassica rapa HOM05D009364 ORTHO05D004599 4.9e-06 55.8 89 38.2
Psat4g081760 Pisum sativum HOM05D005432 ORTHO05D004599 4.9e-06 55.8 53 50.9
TPR.G24237 Trifolium pratense HOM05D005432 ORTHO05D004599 6.3e-06 55.5 104 38.5


User provided reference genes

Program Settings