Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.3e-76 289.7 146 100.0
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 2.3e-57 225.7 146 80.8
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 1.1e-54 216.9 146 79.5
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 2.4e-54 215.7 148 73.6
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 5.1e-49 198.0 149 70.5
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 3.2e-43 178.7 149 63.1
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 7.1e-43 177.6 158 58.9
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 2.1e-42 176.0 151 62.3
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.0e-41 173.7 122 72.1
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 4.5e-37 158.3 142 60.6
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 4.5e-37 158.3 155 58.1
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 2.2e-36 156.0 138 59.4
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 8.5e-36 154.1 120 66.7
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 2.5e-35 152.5 155 58.1
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 5.5e-35 151.4 149 59.1
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 5.5e-35 151.4 143 55.2
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 9.4e-35 150.6 158 55.1
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 1.6e-34 149.8 154 53.9
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 3.6e-34 148.7 150 54.0
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 3.6e-34 148.7 149 53.7
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 4.6e-34 148.3 151 53.6
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 4.6e-34 148.3 153 56.9
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 7.9e-34 147.5 149 53.0
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 7.9e-34 147.5 149 53.0
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 1.4e-33 146.7 150 55.3
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 3.0e-33 145.6 157 52.2
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 3.0e-33 145.6 149 54.4
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 5.1e-33 144.8 150 52.7
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 8.8e-33 144.1 133 57.1
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 1.1e-32 143.7 154 51.9
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 3.3e-32 142.1 149 54.4
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 4.3e-32 141.7 133 56.4
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 4.3e-32 141.7 133 56.4
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 5.7e-32 141.4 147 53.1
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 5.7e-32 141.4 155 50.3
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 5.7e-32 141.4 149 55.0
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 7.4e-32 141.0 146 56.2
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 9.7e-32 140.6 150 53.3
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 9.7e-32 140.6 133 55.6
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 9.7e-32 140.6 151 55.0
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 9.7e-32 140.6 150 52.7
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 1.3e-31 140.2 159 51.6
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 2.2e-31 139.4 134 56.0
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 2.8e-31 139.0 151 51.7
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 3.7e-31 138.7 148 52.7
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 3.7e-31 138.7 153 55.6
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 3.7e-31 138.7 146 55.5
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 6.3e-31 137.9 148 52.7
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 8.2e-31 137.5 137 53.3
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 1.1e-30 137.1 154 55.2
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.4e-30 136.7 137 53.3
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 1.8e-30 136.3 148 52.0
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 1.8e-30 136.3 153 54.9
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 2.4e-30 136.0 151 55.0
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 3.1e-30 135.6 146 53.4
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 3.1e-30 135.6 133 55.6
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 5.3e-30 134.8 148 54.7
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 5.3e-30 134.8 146 53.4
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 6.9e-30 134.4 150 54.7
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 6.9e-30 134.4 154 51.9
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 6.9e-30 134.4 150 50.7
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 9.1e-30 134.0 153 51.0
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 1.2e-29 133.7 150 51.3
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 1.5e-29 133.3 143 51.7
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 3.4e-29 132.1 131 54.2
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 4.5e-29 131.7 150 53.3
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 4.5e-29 131.7 153 50.3
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 5.9e-29 131.3 149 50.3
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 5.9e-29 131.3 149 50.3
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 7.7e-29 131.0 150 53.3
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 1.0e-28 130.6 123 55.3
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 1.0e-28 130.6 146 53.4
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 2.2e-28 129.4 149 51.7
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 3.8e-28 128.6 159 48.4
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 5.0e-28 128.3 145 47.6
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 5.0e-28 128.3 151 49.0
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 5.0e-28 128.3 147 51.7
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 6.5e-28 127.9 149 51.0
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 1.4e-27 126.7 146 47.3
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 1.4e-27 126.7 146 53.4
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 1.4e-27 126.7 150 50.7
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 3.2e-27 125.6 151 51.0
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 1.2e-26 123.6 156 48.1
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 4.7e-26 121.7 138 51.4
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 1.4e-25 120.2 132 48.5
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.4e-25 120.2 119 53.8
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 3.0e-25 119.0 144 47.9
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 3.0e-25 119.0 135 50.4
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 3.0e-25 119.0 126 52.4
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 6.7e-25 117.9 112 55.4
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 8.8e-25 117.5 165 43.0
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 8.8e-25 117.5 111 57.7
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 2.0e-24 116.3 126 50.8
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 4.4e-24 115.2 154 48.7
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 4.4e-24 115.2 129 55.0
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 7.4e-24 114.4 135 50.4
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 7.4e-24 114.4 112 57.1
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 3.7e-23 112.1 132 48.5
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 5.3e-22 108.2 132 50.8
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 2.0e-21 106.3 138 48.6
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 2.2e-20 102.8 129 47.3
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 2.2e-20 102.8 121 47.9
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 2.2e-20 102.8 158 40.5
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 6.5e-20 101.3 87 59.8
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 6.5e-20 101.3 94 57.4
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 7.2e-19 97.8 139 46.0
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 2.7e-18 95.9 130 46.2
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 6.1e-18 94.7 125 46.4
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.8e-17 93.2 112 47.3
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.8e-17 93.2 112 47.3
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 7.4e-16 87.8 138 42.8
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 4.8e-15 85.1 100 54.0
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 8.2e-15 84.3 84 58.3
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 8.2e-15 84.3 84 58.3
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 7.0e-14 81.3 100 53.0
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 1.6e-13 80.1 100 52.0
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 1.6e-13 80.1 100 52.0
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 1.3e-12 77.0 101 49.5
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 2.2e-12 76.3 127 42.5
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 5.5e-11 71.6 78 53.8
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 5.5e-11 71.6 76 50.0
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 1.6e-10 70.1 98 44.9
Pp3c20_18310 Physcomitrium patens HOM05D053615 ORTHO05D007309 9.7e-08 60.8 86 45.3
AUR62037886 Chenopodium quinoa HOM05D006043 ORTHO05D007309 2.2e-07 59.7 146 33.6
Pp3c23_8320 Physcomitrium patens HOM05D053615 ORTHO05D007309 4.8e-07 58.5 85 40.0
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 5.3e-06 55.1 90 37.8
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 5.3e-06 55.1 82 45.1


User provided reference genes

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