Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 0.0e+00 1166.8 648 100.0
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 2.5e-281 971.8 660 84.1
Solyc03g121080.3 Solanum lycopersicum HOM05D008208 ORTHO05D010143 1.4e-268 929.5 658 82.1
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 4.4e-185 652.1 708 61.3
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 2.2e-168 596.7 689 58.5
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 6.2e-163 578.6 708 59.0
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 4.0e-45 187.2 699 31.2
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 4.3e-39 167.2 691 32.4
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 3.1e-37 161.0 679 31.1
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 1.5e-36 158.7 685 31.8
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 3.4e-36 157.5 677 32.3
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 7.6e-36 156.4 716 30.0
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 1.1e-34 152.5 718 29.8
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.0e-32 146.0 747 29.0
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 1.2e-30 139.0 745 29.4
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 3.6e-30 137.5 247 46.2
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 3.6e-30 137.5 702 30.6
Lj5A52T19 Lonicera japonica HOM05D008208 ORTHO05D010143 6.9e-29 133.3 695 29.6
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 3.4e-28 131.0 745 27.9
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 1.4e-26 125.6 708 29.8
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 2.1e-25 121.7 824 26.9
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 5.1e-24 117.1 711 31.1
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 7.3e-23 113.2 337 34.4
MSTRG.11020 Avicennia marina HOM05D008208 ORTHO05D010143 2.4e-21 108.2 705 26.2
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 3.4e-20 104.4 733 27.4
Nn8g39048 Nelumbo nucifera HOM05D008208 ORTHO05D010143 3.4e-20 104.4 749 25.6
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 3.4e-20 104.4 806 25.9
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 3.8e-19 100.9 705 26.7
Prupe.3G057400 Prunus persica HOM05D008208 ORTHO05D010143 3.2e-18 97.8 827 24.9
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 1.6e-17 95.5 710 27.2
CsaV3_3G023500 Cucumis sativus L. HOM05D026900 ORTHO05D010143 1.9e-15 88.6 713 25.5
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 5.6e-15 87.0 692 27.0
Dinv30428 Davidia involucrata HOM05D008208 ORTHO05D010143 9.6e-15 86.3 399 32.1
MELO3C013005.2 Cucumis melo HOM05D026900 ORTHO05D010143 4.8e-14 84.0 632 25.6
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 1.4e-13 82.4 735 24.1
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 5.3e-13 80.5 780 25.0
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 2.6e-12 78.2 723 25.0
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 2.6e-12 78.2 151 41.1
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 1.7e-11 75.5 707 26.7
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 2.2e-11 75.1 736 25.3
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 2.9e-11 74.7 812 25.1
Sabra01G0150900 Salix brachista HOM05D008208 ORTHO05D010143 8.4e-11 73.2 595 29.1
EL10Ac9g21199 Beta vulgaris HOM05D008208 ORTHO05D010143 3.2e-10 71.2 243 31.7
HanXRQChr09g0275691 Helianthus annuus HOM05D008208 ORTHO05D010143 4.2e-10 70.9 242 31.8
Hund07613 Selenicereus undatus HOM05D008208 ORTHO05D010143 1.6e-09 68.9 723 24.1
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 2.7e-09 68.2 720 24.6
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 3.5e-09 67.8 142 37.3
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 1.3e-08 65.9 730 24.9
RcHm_v2.0_Chr2g0140801 Rosa chinensis HOM05D008208 ORTHO05D010143 1.1e-07 62.8 173 35.8
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 1.9e-07 62.0 777 25.4
Migut.I00959 Erythranthe guttata HOM05D008208 ORTHO05D010143 2.5e-07 61.6 312 30.1
Potri.001G190601 Populus trichocarpa HOM05D008208 ORTHO05D010143 5.6e-07 60.5 284 33.5
RcHm_v2.0_Chr2g0140811 Rosa chinensis HOM05D008208 ORTHO05D010143 9.6e-07 59.7 547 27.8
SalBow2G3317 Salvia bowleyana HOM05D008208 ORTHO05D010143 1.6e-06 58.9 752 24.2
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 2.1e-06 58.5 220 30.9
DCAR_023083 Daucus carota HOM05D008208 ORTHO05D010143 2.8e-06 58.2 623 25.5
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 2.8e-06 58.2 207 31.9
Sed0025504 Sechium edule HOM05D026900 ORTHO05D010143 6.2e-06 57.0 784 24.0
unitig_744.g24202 Utricularia gibba HOM05D004628 ORTHO05D005166 8.2e-06 56.6 173 31.8


User provided reference genes

Program Settings