Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002403 Solanum tuberosum HOM05D022282 ORTHO05D017747 4.9e-102 374.4 179 100.0
Psat0s2381g0040 Pisum sativum HOM05D000107 ORTHO05D000062 9.4e-29 131.0 182 41.2
Sopen09g020930 Solanum pennellii HOM05D000107 ORTHO05D000062 3.3e-26 122.5 68 85.3
Solyc11g044933.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 2.2e-25 119.8 112 48.2
Sopen11g015850 Solanum pennellii HOM05D000107 ORTHO05D000062 5.5e-21 105.1 109 45.0
PGSC0003DMG400011670 Solanum tuberosum HOM05D000107 ORTHO05D000062 8.8e-19 97.8 68 72.1
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 1.2e-18 97.4 106 42.5
VMungo0331G0141 Vigna mungo HOM05D000107 ORTHO05D000062 2.0e-18 96.7 108 42.6
TPR.G40866 Trifolium pratense HOM05D000107 ORTHO05D000062 6.3e-17 91.7 68 66.2
Psat0s2164g0040 Pisum sativum HOM05D000107 ORTHO05D010767 1.4e-16 90.5 173 33.5
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 1.2e-15 87.4 150 32.0
VMungo0251G1174 Vigna mungo HOM05D022282 ORTHO05D017747 7.7e-15 84.7 109 39.4
CAN.G501.3 Capsicum annuum HOM05D000107 ORTHO05D000062 1.9e-13 80.1 110 38.2
CAN.G1104.1 Capsicum annuum HOM05D022282 ORTHO05D017747 2.5e-13 79.7 109 37.6
CAN.G2483.1 Capsicum annuum HOM05D022282 ORTHO05D017747 2.5e-13 79.7 109 37.6
Psat0s4310g0040 Pisum sativum HOM05D000107 ORTHO05D031396 2.5e-13 79.7 219 27.4
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 4.2e-13 79.0 124 38.7
Sopen01g012100 Solanum pennellii HOM05D000107 ORTHO05D000062 1.6e-12 77.0 65 58.5
CAN.G172.3 Capsicum annuum HOM05D022282 ORTHO05D017747 2.1e-12 76.6 106 34.9
AUR62018146 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.7e-12 76.3 180 32.8
Lj1g0022399 Lotus japonicus HOM05D000107 ORTHO05D000062 4.0e-11 72.4 68 51.5
Solyc07g026877.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 8.8e-11 71.2 66 50.0
EL10Ac3g06518 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-10 69.7 195 28.7
PGSC0003DMG400028085 Solanum tuberosum HOM05D000107 ORTHO05D000062 4.4e-10 68.9 54 64.8
Psat0s2247g0040 Pisum sativum HOM05D002954 ORTHO05D017747 5.7e-10 68.6 83 38.6
TWI34G0635 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.7e-09 67.0 69 50.7
Solyc03g013305.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 2.2e-09 66.6 66 47.0
Solyc08g015837.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 2.8e-09 66.2 66 45.5
EL10Ac5g11458 Beta vulgaris HOM05D000107 ORTHO05D000062 3.7e-09 65.9 175 30.3
EL10Ac3g06258 Beta vulgaris HOM05D000107 ORTHO05D000062 6.3e-09 65.1 188 29.8
EL10Ac3g06668 Beta vulgaris HOM05D000107 ORTHO05D000062 6.3e-09 65.1 175 28.6
RcHm_v2.0_Chr4g0403821 Rosa chinensis HOM05D000107 ORTHO05D000062 2.4e-08 63.2 51 58.8
Rhsim13G0141700 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-08 62.4 69 49.3
FvH4_6g23073 Fragaria vesca HOM05D000107 ORTHO05D000062 7.0e-08 61.6 161 30.4
TPR.G12918 Trifolium pratense HOM05D000107 ORTHO05D000062 7.0e-08 61.6 69 47.8
EL10Ac3g06228 Beta vulgaris HOM05D000107 ORTHO05D000062 9.1e-08 61.2 190 28.4
CANSAT78G0770 Cannabis sativa HOM05D000107 ORTHO05D000062 9.1e-08 61.2 62 48.4
Ca_02604_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 9.1e-08 61.2 69 47.8
Ca_11754_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 9.1e-08 61.2 69 47.8
Psat6g201280 Pisum sativum HOM05D000107 ORTHO05D000062 1.2e-07 60.8 69 44.9
CAN.G129.52 Capsicum annuum HOM05D001089 ORTHO05D000920 1.6e-07 60.5 51 54.9
Ca_12564_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.6e-07 60.5 69 44.9
ECA232G2995 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.6e-07 60.5 48 58.3
CSS0004152 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-07 60.1 61 47.5
CANSAT35G0031 Cannabis sativa HOM05D000107 ORTHO05D000062 2.0e-07 60.1 62 48.4
AUR62041429 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.0e-07 60.1 81 42.0
Ca_03768_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.0e-07 60.1 69 52.2
Ca_12561_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.0e-07 60.1 67 46.3
EL10Ac1g02241 Beta vulgaris HOM05D000107 ORTHO05D000062 2.7e-07 59.7 64 48.4
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.7e-07 59.7 51 56.9
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.7e-07 59.7 51 56.9
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.7e-07 59.7 51 56.9
AUR62031314 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.5e-07 59.3 85 40.0
EL10Ac4g08668 Beta vulgaris HOM05D000107 ORTHO05D000062 5.9e-07 58.5 50 58.0
ECA238G2897 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.9e-07 58.5 51 52.9
Peaxi162Scf00106g00075 Petunia axillaris HOM05D000107 ORTHO05D003213 5.9e-07 58.5 65 41.5
TWI31G1320 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.9e-07 58.5 54 57.4
CSS0034770 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.7e-07 58.2 62 46.8
PSO675G5010 Papaver somniferum HOM05D000107 ORTHO05D000062 7.7e-07 58.2 67 44.8
Sopen09g020920 Solanum pennellii HOM05D000107 ORTHO05D000062 7.7e-07 58.2 57 54.4
CSS0004309 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.0e-06 57.8 61 45.9
AUR62043135 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.0e-06 57.8 63 44.4
TAR344G0007 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.3e-06 57.4 53 52.8
Atru.chr6.2082 Acer truncatum HOM05D000107 ORTHO05D000062 1.7e-06 57.0 66 45.5
EL10Ac7g17545 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-06 57.0 163 29.4
Atru.chr5.1751 Acer truncatum HOM05D000107 ORTHO05D000062 2.3e-06 56.6 50 54.0
AUR62038570 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.3e-06 56.6 67 46.3
ECA246G0484 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.3e-06 56.6 63 46.0
ECA246G1530 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.3e-06 56.6 48 54.2
Atru.chr4.1567 Acer truncatum HOM05D000107 ORTHO05D000062 2.9e-06 56.2 50 52.0
EL10Ac5g11174 Beta vulgaris HOM05D000107 ORTHO05D000062 2.9e-06 56.2 50 56.0
EL10Ac6g14370 Beta vulgaris HOM05D000107 ORTHO05D000062 2.9e-06 56.2 69 44.9
ECA199G0005 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.9e-06 56.2 48 52.1
ECA233G5459 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.9e-06 56.2 48 52.1
ECA240G3400 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.9e-06 56.2 48 52.1
ECA247G3810 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.9e-06 56.2 49 53.1
PSO541G6329 Papaver somniferum HOM05D000107 ORTHO05D000062 2.9e-06 56.2 51 51.0
PSO566G0060 Papaver somniferum HOM05D000107 ORTHO05D000062 2.9e-06 56.2 51 51.0
EL10Ac3g06535 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.8 50 56.0
EL10Ac3g06762 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.8 50 56.0
EL10Ac3g06764 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.8 50 56.0
EL10Ac5g10888 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.8 50 56.0
EL10Ac5g11788 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.8 50 56.0
EL10Ac5g12078 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.8 50 56.0
EL10Ac6g14419 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.8 50 56.0
EL10Ac6g14561 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.8 50 56.0
EL10Ac7g16686 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.8 50 56.0
EL10As9g23953 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.8 50 56.0
CSS0013777 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.8e-06 55.8 51 56.9
ECA234G0430 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.8e-06 55.8 49 53.1
ECA247G2711 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.8e-06 55.8 48 54.2
PSO017G5730 Papaver somniferum HOM05D000107 ORTHO05D000062 3.8e-06 55.8 67 44.8
QL04p092704 Quercus lobata HOM05D000107 ORTHO05D000062 3.8e-06 55.8 51 52.9
TAR137G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 3.8e-06 55.8 53 50.9
Atru.chr1.768 Acer truncatum HOM05D000107 ORTHO05D000062 5.0e-06 55.5 51 54.9
EL10Ac2g03017 Beta vulgaris HOM05D000107 ORTHO05D000062 5.0e-06 55.5 173 25.4
EL10Ac2g03128 Beta vulgaris HOM05D000107 ORTHO05D000062 5.0e-06 55.5 51 54.9
EL10Ac5g11467 Beta vulgaris HOM05D000107 ORTHO05D000062 5.0e-06 55.5 60 50.0
EL10Ac5g11504 Beta vulgaris HOM05D000107 ORTHO05D000062 5.0e-06 55.5 64 45.3
EL10Ac6g13842 Beta vulgaris HOM05D000107 ORTHO05D000062 5.0e-06 55.5 71 43.7
EL10Ac9g20781 Beta vulgaris HOM05D000107 ORTHO05D000062 5.0e-06 55.5 64 43.8
CANSAT78G2036 Cannabis sativa HOM05D000107 ORTHO05D000062 5.0e-06 55.5 53 50.9
Atru.chr11.112 Acer truncatum HOM05D000107 ORTHO05D000062 6.6e-06 55.1 66 43.9
EL10Ac5g11499 Beta vulgaris HOM05D000107 ORTHO05D000062 6.6e-06 55.1 50 54.0
EL10Ac5g11815 Beta vulgaris HOM05D000107 ORTHO05D000062 6.6e-06 55.1 54 50.0
EL10Ac8g19687 Beta vulgaris HOM05D000107 ORTHO05D000062 6.6e-06 55.1 50 56.0
Ca_13669_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 6.6e-06 55.1 69 43.5
EL10Ac1g01863 Beta vulgaris HOM05D000107 ORTHO05D000062 8.6e-06 54.7 68 45.6
EL10Ac3g07058 Beta vulgaris HOM05D000107 ORTHO05D000062 8.6e-06 54.7 60 48.3
EL10Ac7g17483 Beta vulgaris HOM05D000107 ORTHO05D000062 8.6e-06 54.7 50 54.0
CSS0009906 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.6e-06 54.7 51 54.9
CSS0014451 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.6e-06 54.7 51 54.9
CSS0018298 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.6e-06 54.7 51 54.9
CSS0030837 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.6e-06 54.7 51 54.9
CANSAT64G1084 Cannabis sativa HOM05D000107 ORTHO05D000062 8.6e-06 54.7 46 56.5
AUR62014303 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.6e-06 54.7 64 50.0
AUR62037080 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.6e-06 54.7 53 50.9
ECA233G1384 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.6e-06 54.7 53 47.2


User provided reference genes

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