Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002385 Solanum tuberosum HOM05D007988 ORTHO05D009824 7.1e-99 364.0 193 100.0
Sopen04g026140 Solanum pennellii HOM05D007988 ORTHO05D009824 2.5e-72 275.8 196 81.6
CAN.G46.16 Capsicum annuum HOM05D007988 ORTHO05D009824 4.3e-72 275.0 196 83.2
Cc10_g13460 Coffea canephora HOM05D007988 ORTHO05D009824 3.7e-15 85.9 190 37.9
Rhsim11G0074200 Rhododendron simsii HOM05D007988 ORTHO05D009824 1.2e-13 80.9 179 40.8
Manes.02G170000 Manihot esculenta HOM05D007988 ORTHO05D009824 1.6e-13 80.5 204 39.2
Lj4P666T14 Lonicera japonica HOM05D007988 ORTHO05D009824 2.1e-13 80.1 175 43.4
Oeu022143.1 Olea europaea HOM05D007988 ORTHO05D009824 2.1e-13 80.1 181 40.3
Lj4P663T19 Lonicera japonica HOM05D007988 ORTHO05D009824 6.0e-13 78.6 175 42.3
Glyma.06G119000 Glycine max HOM05D007988 ORTHO05D009824 1.9e-11 73.6 190 36.8
Lalb_Chr10g0101461 Lupinus albus HOM05D007988 ORTHO05D009824 2.5e-11 73.2 189 39.2
Cpa.g.sc64.159 Carica papaya HOM05D007988 ORTHO05D009824 3.3e-11 72.8 141 35.5
Glyma.04G244300 Glycine max HOM05D007988 ORTHO05D009824 4.3e-11 72.4 203 35.0
Actinidia29496 Actinidia chinensis HOM05D000744 ORTHO05D000332 5.6e-11 72.0 176 39.2
CiPaw.15G029500 Carya illinoinensis HOM05D007988 ORTHO05D009824 2.8e-10 69.7 185 37.8
Duzib041G0811 Durio zibethinus HOM05D007988 ORTHO05D009824 3.6e-10 69.3 182 38.5
Ca_16619_v3 Cicer arietinum L. HOM05D007988 ORTHO05D009824 6.2e-10 68.6 186 36.6
QL09p030989 Quercus lobata HOM05D007988 ORTHO05D009824 6.2e-10 68.6 177 35.6
CSS0046822 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 1.4e-09 67.4 196 36.2
Migut.C01082 Erythranthe guttata HOM05D007988 ORTHO05D009824 1.4e-09 67.4 166 38.0
SGA_v2.0_scaffold52G18904 Striga asiatica HOM05D007988 ORTHO05D009824 1.8e-09 67.0 194 38.1
Potri.002G076200 Populus trichocarpa HOM05D007988 ORTHO05D009824 2.3e-09 66.6 210 36.7
Prupe.1G442100 Prunus persica HOM05D007988 ORTHO05D009824 3.1e-09 66.2 193 37.3
Sabra05G0140800 Salix brachista HOM05D007988 ORTHO05D009824 3.1e-09 66.2 220 38.2
TWI34G1662 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 3.1e-09 66.2 180 37.2
GSVIVG01008783001 Vitis vinifera HOM05D007988 ORTHO05D009824 4.0e-09 65.9 201 34.3
Gohir.D05G240900 Gossypium hirsutum HOM05D007988 ORTHO05D009824 8.9e-09 64.7 201 35.8
Gorai.009G250000 Gossypium raimondii HOM05D007988 ORTHO05D009824 8.9e-09 64.7 201 35.8
VMungo1309G2256 Vigna mungo HOM05D007988 ORTHO05D009824 8.9e-09 64.7 189 36.5
Medtr3g088735 Medicago truncatula HOM05D007988 ORTHO05D009824 2.0e-08 63.5 191 33.5
TAR381G0794 Trochodendron aralioides HOM05D007988 ORTHO05D009824 5.8e-08 62.0 192 34.9
Ciclev10004037m.g Citrus clementina HOM05D007988 ORTHO05D009824 1.3e-07 60.8 207 35.7
Dinv37735 Davidia involucrata HOM05D007988 ORTHO05D009824 1.3e-07 60.8 154 38.3
Lalb_Chr04g0253601 Lupinus albus HOM05D007988 ORTHO05D009824 1.3e-07 60.8 175 36.6
Duzib093G1224 Durio zibethinus HOM05D007988 ORTHO05D009824 1.7e-07 60.5 205 38.5
Lalb_Chr08g0240981 Lupinus albus HOM05D007988 ORTHO05D009824 1.7e-07 60.5 189 36.0
MD15G1088100 Malus domestica HOM05D007988 ORTHO05D009824 1.7e-07 60.5 206 34.0
Thecc.08G135700 Theobroma cacao HOM05D007988 ORTHO05D009824 1.7e-07 60.5 202 36.6
ECA232G2067 Erigeron canadensis HOM05D007988 ORTHO05D009824 2.2e-07 60.1 179 30.7
Sed0016946 Sechium edule HOM05D007988 ORTHO05D009824 2.2e-07 60.1 179 37.4
Gohir.A05G239200 Gossypium hirsutum HOM05D007988 ORTHO05D009824 2.9e-07 59.7 217 33.6
Lj1g0027207 Lotus japonicus HOM05D007988 ORTHO05D009824 2.9e-07 59.7 207 33.3
Duzib116G0104 Durio zibethinus HOM05D007988 ORTHO05D009824 3.7e-07 59.3 219 35.2
Eucgr.F02525 Eucalyptus grandis HOM05D007988 ORTHO05D009824 4.9e-07 58.9 196 31.6
CsaV3_6G031310 Cucumis sativus L. HOM05D007988 ORTHO05D009824 6.4e-07 58.5 183 36.6
COL.COLO4_33785 Corchorus olitorius HOM05D007988 ORTHO05D009824 8.4e-07 58.2 199 37.7
Atru.chr13.1616 Acer truncatum HOM05D007988 ORTHO05D009824 1.4e-06 57.4 201 36.3
Phvul.009G131400 Phaseolus vulgaris HOM05D007988 ORTHO05D009824 2.4e-06 56.6 199 31.2
TPR.G6352 Trifolium pratense HOM05D007988 ORTHO05D009824 2.4e-06 56.6 181 33.1
Psat0s3071g0240 Pisum sativum HOM05D007988 ORTHO05D009824 4.1e-06 55.8 186 31.2
Haze_17653 Corylus avellana HOM05D007988 ORTHO05D009824 5.4e-06 55.5 191 34.6
TWI60G0631 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 5.4e-06 55.5 215 33.5
BcaB07g32147 Brassica carinata HOM05D012069 ORTHO05D009824 7.1e-06 55.1 173 33.5
CSS0018515 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 7.1e-06 55.1 164 33.5
ClCG08G006150 Citrullus lanatus HOM05D007988 ORTHO05D009824 7.1e-06 55.1 172 36.0
FAN15G1013 Fragaria x ananassa HOM05D007988 ORTHO05D009824 7.1e-06 55.1 168 35.7
RcHm_v2.0_Chr6g0306951 Rosa chinensis HOM05D007988 ORTHO05D009824 7.1e-06 55.1 199 34.2
FvH4_2g35040 Fragaria vesca HOM05D007988 ORTHO05D009824 9.2e-06 54.7 180 36.1


User provided reference genes

Program Settings