Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002279 Solanum tuberosum HOM05D004072 ORTHO05D005933 4.7e-18 93.6 51 100.0
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 4.0e-17 90.5 50 98.0
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 4.0e-17 90.5 50 98.0
PGSC0003DMG400021174 Solanum tuberosum HOM05D004072 ORTHO05D005933 2.0e-16 88.2 50 96.0
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 5.8e-16 86.7 50 88.0
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 9.9e-16 85.9 50 92.0
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 9.9e-16 85.9 50 92.0
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 1.3e-15 85.5 50 86.0
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 1.3e-15 85.5 50 88.0
Hma1.2p1_1600F.1_g293150 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 1.3e-15 85.5 50 88.0
Lj1C1164T5 Lonicera japonica HOM05D004072 ORTHO05D005933 1.3e-15 85.5 50 88.0
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 1.3e-15 85.5 50 90.0
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 2.2e-15 84.7 50 86.0
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 2.9e-15 84.3 50 86.0
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 2.9e-15 84.3 51 88.2
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 3.8e-15 84.0 48 87.5
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 3.8e-15 84.0 48 87.5
Cc09_g08270 Coffea canephora HOM05D004072 ORTHO05D005933 4.9e-15 83.6 50 82.0
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 6.4e-15 83.2 50 86.0
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 6.4e-15 83.2 50 84.0
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 8.4e-15 82.8 50 86.0
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 8.4e-15 82.8 50 88.0
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 8.4e-15 82.8 50 84.0
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 1.1e-14 82.4 48 85.4
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 1.1e-14 82.4 50 86.0
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 1.1e-14 82.4 49 83.7
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.1e-14 82.4 49 83.7
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.1e-14 82.4 49 83.7
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.1e-14 82.4 49 83.7
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 1.1e-14 82.4 50 82.0
QL05p053334 Quercus lobata HOM05D004072 ORTHO05D005933 1.1e-14 82.4 48 87.5
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 1.1e-14 82.4 49 83.7
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 1.4e-14 82.0 50 82.0
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 1.4e-14 82.0 50 84.0
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.4e-14 82.0 49 81.6
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 1.4e-14 82.0 50 84.0
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 1.4e-14 82.0 50 84.0
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 1.4e-14 82.0 50 84.0
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 1.9e-14 81.6 50 82.0
TPR.G28617 Trifolium pratense HOM05D004072 ORTHO05D005933 1.9e-14 81.6 50 82.0
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 1.9e-14 81.6 50 84.0
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 2.4e-14 81.3 50 86.0
RcHm_v2.0_Chr1g0313151 Rosa chinensis HOM05D004072 ORTHO05D005933 2.4e-14 81.3 49 81.6
RcHm_v2.0_Chr1g0313161 Rosa chinensis HOM05D004072 ORTHO05D005933 2.4e-14 81.3 49 81.6
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 3.2e-14 80.9 50 82.0
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 3.2e-14 80.9 50 80.0
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 3.2e-14 80.9 50 82.0
TAR626G0996 Trochodendron aralioides HOM05D004072 ORTHO05D005933 3.2e-14 80.9 48 87.5
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 4.2e-14 80.5 48 81.2
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 4.2e-14 80.5 50 78.0
Ciclev10014084m.g Citrus clementina HOM05D004072 ORTHO05D005933 4.2e-14 80.5 50 80.0
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 4.2e-14 80.5 50 80.0
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 4.2e-14 80.5 50 80.0
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 5.4e-14 80.1 50 80.0
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 5.4e-14 80.1 50 82.0
HPP92_001000 Vanilla planifolia HOM05D004072 ORTHO05D005933 5.4e-14 80.1 50 78.0
EL10Ac9g22637 Beta vulgaris HOM05D004072 ORTHO05D005933 7.1e-14 79.7 50 78.0
Os07g0148800 Oryza sativa ssp. japonica HOM05D004072 ORTHO05D005933 7.1e-14 79.7 48 79.2
Potri.011G090150 Populus trichocarpa HOM05D004072 ORTHO05D005933 7.1e-14 79.7 49 79.6
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 7.1e-14 79.7 50 82.0
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 7.1e-14 79.7 47 83.0
Glyma.15G192700 Glycine max HOM05D004072 ORTHO05D005933 9.2e-14 79.3 48 81.2
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 9.2e-14 79.3 50 80.0
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 9.2e-14 79.3 50 80.0
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 9.2e-14 79.3 50 80.0
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 9.2e-14 79.3 50 76.0
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 1.2e-13 79.0 50 80.0
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 1.2e-13 79.0 50 80.0
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 1.2e-13 79.0 50 80.0
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 1.2e-13 79.0 48 81.2
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 1.6e-13 78.6 48 81.2
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 1.6e-13 78.6 50 78.0
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 2.1e-13 78.2 50 80.0
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 2.1e-13 78.2 50 78.0
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 2.1e-13 78.2 50 80.0
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 2.1e-13 78.2 48 77.1
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 2.7e-13 77.8 48 79.2
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 2.7e-13 77.8 48 79.2
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 2.7e-13 77.8 48 79.2
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 2.7e-13 77.8 50 76.0
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 2.7e-13 77.8 50 78.0
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 2.7e-13 77.8 50 76.0
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 2.7e-13 77.8 50 78.0
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 2.7e-13 77.8 48 79.2
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 2.7e-13 77.8 50 76.0
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 3.5e-13 77.4 50 76.0
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 4.6e-13 77.0 50 78.0
Cc09_g08260 Coffea canephora HOM05D004072 ORTHO05D005933 4.6e-13 77.0 48 81.2
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 6.0e-13 76.6 50 76.0
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 6.0e-13 76.6 50 74.0
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 1.0e-12 75.9 50 74.0
RcHm_v2.0_Chr5g0015771 Rosa chinensis HOM05D004072 ORTHO05D005933 1.0e-12 75.9 49 77.6
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 1.3e-12 75.5 50 76.0
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 1.3e-12 75.5 48 77.1
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 2.3e-12 74.7 50 72.0
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 2.3e-12 74.7 50 72.0
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 3.9e-12 73.9 48 72.9
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 3.9e-12 73.9 48 72.9
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 1.1e-11 72.4 50 68.0
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 1.5e-11 72.0 47 70.2
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 1.5e-11 72.0 50 68.0
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 1.9e-11 71.6 48 70.8
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 1.9e-11 71.6 48 70.8
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 5.6e-11 70.1 47 70.2
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 2.8e-10 67.8 47 68.1
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 3.6e-10 67.4 47 66.0
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 3.6e-10 67.4 47 66.0
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 2.4e-09 64.7 41 73.2
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 4.0e-09 63.9 35 97.1
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 2.6e-08 61.2 37 75.7
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 3.8e-07 57.4 37 67.6
CBR_g34931 Chara braunii HOM05D000019 ORTHO05D001702 4.9e-07 57.0 39 64.1


User provided reference genes

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