Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 2.3e-76 288.9 152 100.0
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 6.5e-71 270.8 155 87.7
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 2.8e-58 228.8 155 78.1
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 4.8e-58 228.0 155 76.8
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 6.5e-55 217.6 155 74.8
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 5.7e-51 204.5 102 96.1
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 5.5e-30 134.8 155 51.0
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 4.7e-29 131.7 153 46.4
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 1.8e-28 129.8 156 46.8
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 5.2e-28 128.3 155 49.7
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 5.7e-27 124.8 154 48.1
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 7.5e-27 124.4 161 44.7
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 9.8e-27 124.0 152 45.4
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 1.3e-26 123.6 155 47.1
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 2.2e-26 122.9 157 45.9
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 1.4e-25 120.2 162 45.1
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 2.4e-25 119.4 152 45.4
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 9.1e-25 117.5 154 40.9
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 1.2e-24 117.1 151 41.7
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 4.5e-24 115.2 160 44.4
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 7.7e-24 114.4 154 42.2
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 1.0e-23 114.0 147 44.9
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.0e-23 114.0 121 47.1
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.3e-23 113.6 152 43.4
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 2.2e-23 112.8 154 42.9
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.9e-23 112.5 122 47.5
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 5.0e-23 111.7 122 48.4
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 5.0e-23 111.7 155 43.9
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 5.0e-23 111.7 153 43.1
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 6.5e-23 111.3 122 47.5
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 6.5e-23 111.3 127 48.0
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 6.5e-23 111.3 141 44.0
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 1.5e-22 110.2 114 46.5
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 2.5e-22 109.4 116 49.1
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 3.2e-22 109.0 157 40.1
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 4.2e-22 108.6 170 41.2
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 7.2e-22 107.8 152 41.4
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 7.2e-22 107.8 122 45.9
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 9.5e-22 107.5 161 44.1
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 3.6e-21 105.5 160 40.0
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 1.0e-20 104.0 164 40.2
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 2.3e-20 102.8 153 37.9
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 3.0e-20 102.4 161 39.8
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 4.0e-20 102.1 156 41.7
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 8.8e-20 100.9 148 37.8
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 8.8e-20 100.9 121 42.1
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 1.5e-19 100.1 156 37.2
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 2.0e-19 99.8 165 41.2
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 3.4e-19 99.0 156 38.5
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 1.3e-18 97.1 156 39.1
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 6.3e-18 94.7 140 42.1
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 6.3e-18 94.7 131 44.3
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 1.8e-17 93.2 126 42.9
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 3.1e-17 92.4 128 39.1
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 1.2e-16 90.5 165 37.0
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 1.6e-16 90.1 131 42.7
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 5.9e-16 88.2 160 39.4
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 1.0e-15 87.4 131 42.0
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 1.0e-15 87.4 117 47.0
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 1.7e-15 86.7 159 35.2
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 2.9e-15 85.9 79 54.4
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 2.9e-15 85.9 120 44.2
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 2.9e-15 85.9 125 42.4
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 5.0e-15 85.1 160 38.1
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 5.0e-15 85.1 126 40.5
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 1.5e-14 83.6 157 37.6
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 1.9e-14 83.2 142 37.3
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 2.5e-14 82.8 127 35.4
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 5.6e-14 81.6 123 39.8
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 9.5e-14 80.9 150 34.0
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 1.6e-13 80.1 128 41.4
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 2.1e-13 79.7 158 36.7
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 2.1e-13 79.7 169 37.9
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 2.8e-13 79.3 143 38.5
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 2.8e-13 79.3 128 38.3
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 8.0e-13 77.8 115 40.0
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 1.0e-12 77.4 129 37.2
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 1.4e-12 77.0 106 36.8
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 3.0e-12 75.9 133 36.8
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 5.2e-12 75.1 160 35.6
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 5.2e-12 75.1 126 35.7
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 8.9e-12 74.3 182 33.0
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 2.6e-11 72.8 161 36.0
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 3.4e-11 72.4 128 40.6
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 3.4e-11 72.4 128 33.6
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 4.4e-11 72.0 128 40.6
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 5.7e-11 71.6 128 40.6
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 5.7e-11 71.6 128 40.6
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 5.7e-11 71.6 128 40.6
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 5.7e-11 71.6 120 35.8
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 7.5e-11 71.2 128 38.3
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 6.4e-10 68.2 163 33.1
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 1.8e-09 66.6 137 32.1
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 3.2e-09 65.9 129 34.1
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 4.1e-09 65.5 114 33.3
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 9.2e-09 64.3 68 52.9
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 4.6e-08 62.0 117 31.6
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 4.6e-08 62.0 117 31.6
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 1.0e-07 60.8 36 63.9
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 6.6e-07 58.2 102 35.3
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 1.1e-06 57.4 155 29.0
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 1.5e-06 57.0 36 61.1


User provided reference genes

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