Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002102 Solanum tuberosum HOM05D000072 ORTHO05D030440 5.5e-55 217.2 99 100.0
PGSC0003DMG400019498 Solanum tuberosum HOM05D000072 ORTHO05D030440 8.8e-37 156.8 82 87.8
Solyc11g007410.3 Solanum lycopersicum HOM05D000072 ORTHO05D000026 2.9e-32 141.7 86 75.6
Solyc11g007430.3 Solanum lycopersicum HOM05D000072 ORTHO05D000026 1.5e-31 139.4 86 74.4
Sopen11g003290 Solanum pennellii HOM05D000072 ORTHO05D000026 7.3e-31 137.1 84 76.2
PGSC0003DMG400020899 Solanum tuberosum HOM05D000072 ORTHO05D000026 5.2e-29 131.0 92 70.7
PGSC0003DMG400029129 Solanum tuberosum HOM05D000072 ORTHO05D000026 5.2e-29 131.0 82 78.0
CAN.G809.85 Capsicum annuum HOM05D000072 ORTHO05D000026 2.3e-24 115.5 80 71.2
Nitab4.5_0000108g0090 Nicotiana tabacum HOM05D000072 ORTHO05D000026 9.5e-23 110.2 93 61.3
Sopen02g026130 Solanum pennellii HOM05D000072 ORTHO05D000026 9.5e-23 110.2 79 69.6
Nitab4.5_0003580g0020 Nicotiana tabacum HOM05D000072 ORTHO05D000026 1.7e-19 99.4 83 60.2
Sopen02g024420 Solanum pennellii HOM05D000072 ORTHO05D000026 1.7e-19 99.4 73 64.4
Peaxi162Scf00344g01810 Petunia axillaris HOM05D000072 ORTHO05D000026 1.2e-17 93.2 77 61.0
Peaxi162Scf00450g00033 Petunia axillaris HOM05D000072 ORTHO05D000026 1.7e-16 89.4 83 56.6
SalBow1G2310 Salvia bowleyana HOM05D000072 ORTHO05D000026 7.1e-10 67.4 83 42.2
SalBow4G0897 Salvia bowleyana HOM05D000072 ORTHO05D000026 7.1e-10 67.4 83 42.2
SalBow4G0643 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.2e-09 66.6 85 38.8
Oeu060619.2 Olea europaea HOM05D000072 ORTHO05D000026 1.6e-09 66.2 82 37.8
SalBow4G2664 Salvia bowleyana HOM05D000072 ORTHO05D000026 2.1e-09 65.9 70 44.3
SalBow5G5469 Salvia bowleyana HOM05D000072 ORTHO05D000026 2.7e-09 65.5 96 39.6
SalBow1G2405 Salvia bowleyana HOM05D000072 ORTHO05D000026 6.0e-09 64.3 85 37.6
SalBow1G2406 Salvia bowleyana HOM05D000072 ORTHO05D000026 7.8e-09 63.9 65 44.6
SalBow4G0936 Salvia bowleyana HOM05D000072 ORTHO05D000026 7.8e-09 63.9 65 44.6
Lj5C554T7 Lonicera japonica HOM05D000072 ORTHO05D000026 1.3e-08 63.2 96 35.4
SalBow1G2634 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.3e-08 63.2 87 37.9
SalBow4G1540 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.3e-08 63.2 77 42.9
SalBow4G2994 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.3e-08 63.2 87 37.9
QL09p009937 Quercus lobata HOM05D000072 ORTHO05D000026 2.3e-08 62.4 104 34.6
SalBow1G8570 Salvia bowleyana HOM05D000072 ORTHO05D000026 2.3e-08 62.4 74 40.5
SalBow4G0175 Salvia bowleyana HOM05D000072 ORTHO05D000026 2.3e-08 62.4 72 38.9
SalBow4G1353 Salvia bowleyana HOM05D000072 ORTHO05D000026 2.3e-08 62.4 72 38.9
SalBow4G2617 Salvia bowleyana HOM05D000072 ORTHO05D000026 2.3e-08 62.4 74 40.5
SalBow4G2953 Salvia bowleyana HOM05D000072 ORTHO05D000026 2.3e-08 62.4 74 40.5
SalBow4G0973 Salvia bowleyana HOM05D000072 ORTHO05D000026 3.9e-08 61.6 83 37.3
SalBow4G1637 Salvia bowleyana HOM05D000072 ORTHO05D000026 3.9e-08 61.6 84 39.3
SalBow4G1917 Salvia bowleyana HOM05D000072 ORTHO05D000026 3.9e-08 61.6 77 42.9
SalBow4G2743 Salvia bowleyana HOM05D000072 ORTHO05D000026 3.9e-08 61.6 75 36.0
SalBow4G3098 Salvia bowleyana HOM05D000072 ORTHO05D000026 3.9e-08 61.6 83 37.3
MSTRG.8670 Avicennia marina HOM05D000072 ORTHO05D000026 5.1e-08 61.2 70 38.6
QL09p009750 Quercus lobata HOM05D000072 ORTHO05D000026 5.1e-08 61.2 82 36.6
SalBow2G2325 Salvia bowleyana HOM05D000072 ORTHO05D000026 5.1e-08 61.2 106 30.2
SalBow4G1253 Salvia bowleyana HOM05D000072 ORTHO05D000026 5.1e-08 61.2 70 45.7
SalBow4G3046 Salvia bowleyana HOM05D000072 ORTHO05D000026 5.1e-08 61.2 70 45.7
Cfa021379 Carpinus fangiana HOM05D000072 ORTHO05D000026 6.6e-08 60.8 78 39.7
Prupe.2G087800 Prunus persica HOM05D000072 ORTHO05D000026 6.6e-08 60.8 79 32.9
SalBow4G2726 Salvia bowleyana HOM05D000072 ORTHO05D000026 8.6e-08 60.5 78 35.9
SalBow5G0956 Salvia bowleyana HOM05D000072 ORTHO05D000026 8.6e-08 60.5 71 42.3
SalBow5G0988 Salvia bowleyana HOM05D000072 ORTHO05D000026 8.6e-08 60.5 71 42.3
SalBow5G1152 Salvia bowleyana HOM05D000072 ORTHO05D000026 8.6e-08 60.5 71 42.3
SalBow4G0677 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.1e-07 60.1 65 41.5
SalBow4G1332 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.1e-07 60.1 70 44.3
SalBow4G1560 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.1e-07 60.1 65 41.5
SalBow4G1890 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.1e-07 60.1 65 41.5
SalBow4G2171 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.1e-07 60.1 81 35.8
SalBow4G2235 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.1e-07 60.1 64 37.5
SalBow4G1194 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.5e-07 59.7 76 40.8
SalBow4G3129 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.5e-07 59.7 78 39.7
MD02G1273500 Malus domestica HOM05D000072 ORTHO05D000026 4.3e-07 58.2 75 37.3
SalBow4G2406 Salvia bowleyana HOM05D000072 ORTHO05D000026 7.3e-07 57.4 71 38.0
Peaxi162Scf00344g01812 Petunia axillaris HOM05D000072 ORTHO05D030440 9.5e-07 57.0 49 55.1
FAN10G2588 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.2e-06 56.6 78 33.3
PGSC0003DMG400019723 Solanum tuberosum HOM05D000072 ORTHO05D030440 1.2e-06 56.6 40 65.0
SalBow4G2460 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.6e-06 56.2 72 36.1
TPR.G36960 Trifolium pratense HOM05D000072 ORTHO05D000026 1.6e-06 56.2 112 33.9
MD07G1070400 Malus domestica HOM05D000072 ORTHO05D000026 2.1e-06 55.8 80 32.5
Oeu037095.1 Olea europaea HOM05D000072 ORTHO05D000026 2.1e-06 55.8 81 33.3
Prupe.2G087100 Prunus persica HOM05D000072 ORTHO05D000026 3.6e-06 55.1 80 30.0
QL09p009834 Quercus lobata HOM05D000072 ORTHO05D000026 3.6e-06 55.1 85 34.1
MD02G1249300 Malus domestica HOM05D000072 ORTHO05D000026 4.7e-06 54.7 78 30.8
FAN03G3012 Fragaria x ananassa HOM05D000072 ORTHO05D000026 6.2e-06 54.3 78 33.3
FAN22G1936 Fragaria x ananassa HOM05D000072 ORTHO05D000026 8.1e-06 53.9 79 32.9
MD02G1233600 Malus domestica HOM05D000072 ORTHO05D000026 8.1e-06 53.9 80 31.2
MD07G1070000 Malus domestica HOM05D000072 ORTHO05D000026 8.1e-06 53.9 80 31.2
Prupe.2G093600 Prunus persica HOM05D000072 ORTHO05D000026 8.1e-06 53.9 73 38.4


User provided reference genes

Program Settings