Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002097 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.1e-108 396.7 214 100.0
Sopen05g011420 Solanum pennellii HOM05D003329 ORTHO05D006664 2.7e-46 189.5 110 89.1
Solyc07g150124.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 3.8e-45 185.7 107 90.7
Solyc10g054410.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 9.5e-36 154.5 96 84.4
Sopen07g013090 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-33 147.5 126 70.6
Solyc12g062227.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 1.5e-33 147.1 108 75.9
CAN.G264.22 Capsicum annuum HOM05D003329 ORTHO05D006664 3.5e-30 136.0 95 72.6
Sopen07g022750 Solanum pennellii HOM05D003329 ORTHO05D006664 4.6e-30 135.6 71 95.8
PGSC0003DMG400029715 Solanum tuberosum HOM05D003329 ORTHO05D006664 3.9e-29 132.5 95 70.5
PGSC0003DMG400036646 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.9e-28 130.2 112 66.1
PGSC0003DMG400017907 Solanum tuberosum HOM05D003329 ORTHO05D006664 4.3e-28 129.0 95 68.4
PGSC0003DMG400022546 Solanum tuberosum HOM05D003329 ORTHO05D006664 4.3e-28 129.0 95 68.4
CAN.G229.35 Capsicum annuum HOM05D003329 ORTHO05D006664 9.5e-28 127.9 133 57.1
CAN.G78.125 Capsicum annuum HOM05D003329 ORTHO05D006664 9.5e-28 127.9 110 60.9
CAN.G26.44 Capsicum annuum HOM05D003329 ORTHO05D006664 8.1e-27 124.8 93 68.8
Nitab4.5_0003022g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-24 117.5 115 56.5
PGSC0003DMG400008529 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.3e-24 117.5 83 66.3
Nitab4.5_0001759g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.4e-23 112.1 115 54.8
Nitab4.5_0000653g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.1e-23 111.7 115 53.0
CAN.G208.4 Capsicum annuum HOM05D000201 ORTHO05D000490 2.1e-22 110.2 131 51.9
Nitab4.5_0000092g0290 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.1e-22 110.2 113 55.8
CAN.G255.13 Capsicum annuum HOM05D003329 ORTHO05D006664 3.5e-22 109.4 83 68.7
Nitab4.5_0000213g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.0e-21 107.8 113 54.9
Nitab4.5_0000381g0260 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.0e-21 107.8 121 54.5
Nitab4.5_0000316g0080 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.7e-21 107.1 119 51.3
Nitab4.5_0000682g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.3e-21 106.7 106 58.5
CAN.G675.4 Capsicum annuum HOM05D000040 ORTHO05D009963 5.1e-21 105.5 72 75.0
PGSC0003DMG401006646 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.1e-20 104.4 63 82.5
Nitab4.5_0000785g0110 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.9e-20 103.6 112 54.5
Nitab4.5_0008974g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.5e-20 103.2 108 52.8
Nitab4.5_0001573g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.3e-20 102.4 137 46.7
Nitab4.5_0000565g0250 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.6e-20 102.1 115 53.0
Nitab4.5_0002330g0170 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.6e-20 102.1 113 51.3
Sopen07g021890 Solanum pennellii HOM05D000004 ORTHO05D006664 9.5e-20 101.3 59 86.4
PGSC0003DMG400044748 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.2e-19 100.9 70 68.6
Sopen10g024270 Solanum pennellii HOM05D003329 ORTHO05D006664 1.6e-19 100.5 75 72.0
Nitab4.5_0000128g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.3e-18 96.7 130 47.7
Nitab4.5_0000393g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-17 94.0 99 52.5
Solyc04g050445.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 1.7e-16 90.5 59 83.1
Nitab4.5_0001401g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.2e-16 90.1 94 55.3
Nitab4.5_0002918g0120 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.2e-16 90.1 89 55.1
CAN.G3481.2 Capsicum annuum HOM05D003329 ORTHO05D006664 3.8e-16 89.4 86 58.1
Nitab4.5_0000529g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.4e-16 88.6 108 50.0
PGSC0003DMG400045983 Solanum tuberosum HOM05D003329 ORTHO05D006664 8.4e-16 88.2 59 76.3
CAN.G1572.5 Capsicum annuum HOM05D003329 ORTHO05D006664 3.2e-15 86.3 92 54.3
Peaxi162Scf00765g00129 Petunia axillaris HOM05D003329 ORTHO05D006664 4.1e-15 85.9 102 49.0
Nitab4.5_0000329g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.4e-15 85.5 141 41.8
Peaxi162Scf00025g02431 Petunia axillaris HOM05D003329 ORTHO05D006664 1.6e-14 84.0 124 42.7
Nitab4.5_0011168g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.1e-14 83.6 116 45.7
Nitab4.5_0000141g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.0e-13 81.3 68 63.2
Nitab4.5_0003484g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.3e-13 80.1 86 57.0
Peaxi162Scf00237g01212 Petunia axillaris HOM05D003329 ORTHO05D006664 3.9e-13 79.3 96 47.9
Nitab4.5_0002149g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.1e-13 79.0 121 45.5
Nitab4.5_0000417g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.5e-12 76.6 107 45.8
Peaxi162Scf01176g00135 Petunia axillaris HOM05D003329 ORTHO05D006664 3.3e-12 76.3 99 46.5
Peaxi162Scf00225g00104 Petunia axillaris HOM05D003329 ORTHO05D006664 7.3e-12 75.1 118 39.8
Peaxi162Scf00884g00022 Petunia axillaris HOM05D003329 ORTHO05D006664 7.3e-12 75.1 139 36.7
Peaxi162Scf00990g00006 Petunia axillaris HOM05D003329 ORTHO05D006664 7.3e-12 75.1 118 39.8
Nitab4.5_0008332g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.6e-12 74.7 64 59.4
Nitab4.5_0016516g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-11 73.9 63 58.7
Peaxi162Scf01414g00018 Petunia axillaris HOM05D003329 ORTHO05D006664 1.6e-11 73.9 118 39.8
Peaxi162Scf00171g00215 Petunia axillaris HOM05D003329 ORTHO05D006664 3.6e-11 72.8 124 38.7
Nitab4.5_0005116g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.2e-11 72.0 80 53.8
Sopen08g005900 Solanum pennellii HOM05D003150 ORTHO05D003532 1.4e-10 70.9 41 85.4
Nitab4.5_0000119g0270 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.8e-10 70.5 99 46.5
Peaxi162Scf00021g00075 Petunia axillaris HOM05D003329 ORTHO05D006664 2.4e-10 70.1 124 38.7
Peaxi162Scf00351g00121 Petunia axillaris HOM05D003329 ORTHO05D001349 5.2e-10 68.9 139 34.5
Peaxi162Scf00031g00088 Petunia axillaris HOM05D003329 ORTHO05D001349 8.9e-10 68.2 118 39.8
Nitab4.5_0000270g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.2e-09 67.8 84 51.2
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 1.5e-09 67.4 86 47.7
Peaxi162Scf00067g10116 Petunia axillaris HOM05D003329 ORTHO05D006664 1.5e-09 67.4 84 42.9
Peaxi162Scf00145g00105 Petunia axillaris HOM05D003329 ORTHO05D006664 1.5e-09 67.4 84 42.9
Peaxi162Scf00318g00410 Petunia axillaris HOM05D003329 ORTHO05D006664 1.5e-09 67.4 84 42.9
Nitab4.5_0003774g0080 Nicotiana tabacum HOM05D003329 ORTHO05D001349 2.0e-09 67.0 75 48.0
Nitab4.5_0005964g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.4e-09 66.2 65 53.8
Peaxi162Scf00174g00315 Petunia axillaris HOM05D003329 ORTHO05D001349 3.4e-09 66.2 74 44.6
Nitab4.5_0005015g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.4e-09 65.9 107 41.1
Peaxi162Scf00073g00225 Petunia axillaris HOM05D003329 ORTHO05D006664 5.8e-09 65.5 123 35.0
Nitab4.5_0001309g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.9e-09 64.7 58 55.2
Nitab4.5_0003152g0050 Nicotiana tabacum HOM05D003329 ORTHO05D011659 1.7e-08 63.9 105 42.9
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-08 63.9 70 42.9
Nitab4.5_0000073g0200 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.2e-08 63.5 58 51.7
Solyc02g031730.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 2.2e-08 63.5 84 40.5
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 2.9e-08 63.2 83 39.8
Nitab4.5_0000248g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.8e-08 62.8 95 43.2
Solyc04g016085.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 3.8e-08 62.8 82 40.2
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-08 62.8 84 40.5
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-08 62.8 84 40.5
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-08 62.8 84 40.5
Nitab4.5_0002026g0180 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.9e-08 62.4 103 40.8
Nitab4.5_0005696g0060 Nicotiana tabacum HOM05D003329 ORTHO05D015718 4.9e-08 62.4 120 37.5
Peaxi162Scf00098g00068 Petunia axillaris HOM05D003329 ORTHO05D015718 4.9e-08 62.4 79 44.3
Solyc03g122210.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 4.9e-08 62.4 84 40.5
Solyc09g008110.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 4.9e-08 62.4 84 40.5
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 4.9e-08 62.4 84 40.5
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-08 62.4 84 40.5
Sopen07g012470 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-08 62.4 84 40.5
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-08 62.4 84 40.5
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-08 62.4 84 40.5
Nitab4.5_0001433g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.4e-08 62.0 67 47.8
Peaxi162Scf00178g00072 Petunia axillaris HOM05D003329 ORTHO05D006664 8.4e-08 61.6 68 44.1
Solyc02g062435.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 1.4e-07 60.8 68 42.6
Solyc01g111480.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 1.9e-07 60.5 82 39.0
Peaxi162Scf04852g00001 Petunia axillaris HOM05D003329 ORTHO05D006664 2.4e-07 60.1 146 31.5
PGSC0003DMG400002554 Solanum tuberosum HOM05D000017 ORTHO05D009364 9.3e-07 58.2 82 39.0
Nitab4.5_0012182g0020 Nicotiana tabacum HOM05D003329 ORTHO05D011659 1.6e-06 57.4 205 31.7
Nitab4.5_0003338g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.1e-06 57.0 46 58.7
PGSC0003DMG400017611 Solanum tuberosum HOM05D000017 ORTHO05D001349 2.1e-06 57.0 70 45.7
Peaxi162Scf00802g00124 Petunia axillaris HOM05D003329 ORTHO05D006664 2.7e-06 56.6 84 40.5
Peaxi162Scf00365g00058 Petunia axillaris HOM05D000017 ORTHO05D001349 3.5e-06 56.2 94 38.3
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 3.5e-06 56.2 111 32.4
Peaxi162Scf00131g00813 Petunia axillaris HOM05D000017 ORTHO05D001349 4.6e-06 55.8 95 37.9
Sopen09g007720 Solanum pennellii HOM05D000017 ORTHO05D009364 6.0e-06 55.5 84 36.9
Sopen11g025620 Solanum pennellii HOM05D000017 ORTHO05D001349 6.0e-06 55.5 68 39.7


User provided reference genes

Program Settings