Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002048 Solanum tuberosum HOM05D003319 ORTHO05D003739 9.8e-162 573.5 319 100.0
Sopen12g030000 Solanum pennellii HOM05D003319 ORTHO05D003739 6.1e-148 527.7 319 92.5
Solyc12g087970.2 Solanum lycopersicum HOM05D003319 ORTHO05D003739 1.1e-139 500.4 319 89.7
CAN.G806.11 Capsicum annuum HOM05D003319 ORTHO05D003739 2.5e-109 399.4 329 73.9
Nitab4.5_0000354g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 4.3e-85 318.9 347 58.5
Nitab4.5_0001607g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 4.5e-82 308.9 345 58.0
Peaxi162Scf00160g01038 Petunia axillaris HOM05D003319 ORTHO05D003739 5.3e-59 232.3 339 48.4
Peaxi162Scf00454g00323 Petunia axillaris HOM05D003319 ORTHO05D003739 2.0e-45 187.2 289 48.4
Nitab4.5_0000131g0210 Nicotiana tabacum HOM05D003319 ORTHO05D003739 7.0e-43 178.7 316 45.9
Solyc04g076360.4 Solanum lycopersicum HOM05D003319 ORTHO05D003739 3.8e-41 172.9 243 51.0
Actinidia19627 Actinidia chinensis HOM05D003319 ORTHO05D003739 1.4e-35 154.5 323 38.4
CAN.G475.23 Capsicum annuum HOM05D003319 ORTHO05D003739 1.1e-32 144.8 297 43.4
Nitab4.5_0005913g0020 Nicotiana tabacum HOM05D003319 ORTHO05D003739 1.4e-30 137.9 325 39.4
Dinv42609 Davidia involucrata HOM05D003319 ORTHO05D003739 1.8e-30 137.5 273 44.7
Cc10_g15920 Coffea canephora HOM05D003319 ORTHO05D003739 1.7e-28 131.0 231 45.0
PGSC0003DMG400009342 Solanum tuberosum HOM05D003319 ORTHO05D003739 1.7e-28 131.0 237 45.6
Sopen00g008100 Solanum pennellii HOM05D003319 ORTHO05D003739 6.4e-28 129.0 243 44.9
Rhsim07G0212100 Rhododendron simsii HOM05D003319 ORTHO05D003739 2.0e-26 124.0 234 46.2
Lj4A737G58 Lonicera japonica HOM05D003319 ORTHO05D003739 5.0e-25 119.4 250 41.2
vmacro04648 Vaccinium macrocarpon HOM05D003319 ORTHO05D003739 5.0e-25 119.4 326 37.7
GSVIVG01009184001 Vitis vinifera HOM05D003319 ORTHO05D003739 1.9e-19 100.9 274 38.3
Hma1.2p1_0010F.1_g006630 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 1.6e-18 97.8 257 37.0
MSTRG.11807 Avicennia marina HOM05D003319 ORTHO05D003739 7.8e-18 95.5 332 30.4
Nitab4.5_0000048g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 2.3e-17 94.0 184 39.1
CANSAT35G1730 Cannabis sativa HOM05D003319 ORTHO05D003739 8.6e-17 92.0 322 32.6
Aqoxy5G01378 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 5.6e-16 89.4 237 38.0
SGA_v2.0_scaffold193G40665 Striga asiatica HOM05D003319 ORTHO05D003739 1.1e-14 85.1 183 38.8
DCAR_019315 Daucus carota HOM05D003319 ORTHO05D003739 1.4e-14 84.7 320 32.8
TAR376G1177 Trochodendron aralioides HOM05D003319 ORTHO05D003739 6.8e-14 82.4 268 35.1
SalBow4G2315 Salvia bowleyana HOM05D003319 ORTHO05D003739 1.2e-13 81.6 315 31.4
Hund04947 Selenicereus undatus HOM05D003319 ORTHO05D003739 1.2e-13 81.6 230 37.4
Migut.A00432 Erythranthe guttata HOM05D003319 ORTHO05D003739 3.4e-13 80.1 211 37.4
Nn1g05581 Nelumbo nucifera HOM05D003319 ORTHO05D003739 7.6e-13 79.0 257 35.0
Atru.chr13.1006 Acer truncatum HOM05D003319 ORTHO05D003739 9.9e-13 78.6 275 37.1
CDE05G3064 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 9.9e-13 78.6 208 38.9
Lj4A717G27 Lonicera japonica HOM05D003319 ORTHO05D003739 9.9e-13 78.6 249 34.1
CSS0012387 Camellia sinensis var. sinensis HOM05D003319 ORTHO05D003739 1.7e-12 77.8 204 38.2
Eucgr.F02154 Eucalyptus grandis HOM05D003319 ORTHO05D003739 4.9e-12 76.3 327 33.0
Prupe.1G532700 Prunus persica HOM05D003319 ORTHO05D003739 1.9e-11 74.3 333 32.1
CiPaw.07G165000 Carya illinoinensis HOM05D003319 ORTHO05D003739 4.1e-11 73.2 222 35.6
AUR62019092 Chenopodium quinoa HOM05D003319 ORTHO05D003739 4.1e-11 73.2 303 32.7
TAR628G1108 Trochodendron aralioides HOM05D003319 ORTHO05D003739 4.1e-11 73.2 301 32.6
Ciclev10000622m.g Citrus clementina HOM05D003319 ORTHO05D003739 7.1e-11 72.4 244 34.0
Hma1.2p1_0125F.1_g058840 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 7.1e-11 72.4 214 36.4
EL10Ac1g00993 Beta vulgaris HOM05D003319 ORTHO05D003739 3.5e-10 70.1 267 31.1
Cfa013800 Carpinus fangiana HOM05D003319 ORTHO05D003739 7.8e-10 68.9 291 31.6
MD15G1385800 Malus domestica HOM05D003319 ORTHO05D003739 1.7e-09 67.8 321 32.4
Sc26g0002970 Simmondsia chinensis HOM05D003319 ORTHO05D003739 1.7e-09 67.8 264 34.5
EL10Ac3g06093 Beta vulgaris HOM05D003319 ORTHO05D003739 8.6e-09 65.5 191 36.6
MBI16_g19592_MAGBIO Magnolia biondii HOM05D003319 ORTHO05D003739 1.1e-08 65.1 345 28.4
Oeu040388.1 Olea europaea HOM05D003319 ORTHO05D003739 1.5e-08 64.7 189 34.9
Hund17284 Selenicereus undatus HOM05D003319 ORTHO05D003739 3.3e-08 63.5 316 29.4
Prupe.1G532600 Prunus persica HOM05D003319 ORTHO05D003739 4.3e-08 63.2 213 34.7
Haze_23237 Corylus avellana HOM05D003319 ORTHO05D003739 5.6e-08 62.8 149 39.6
PGR042G0823 Punica granatum HOM05D003319 ORTHO05D003739 5.6e-08 62.8 246 35.0
Manes.02G144600 Manihot esculenta HOM05D003319 ORTHO05D003739 1.6e-07 61.2 240 32.5
QL09p017848 Quercus lobata HOM05D003319 ORTHO05D003739 1.6e-07 61.2 327 30.3
AUR62014349 Chenopodium quinoa HOM05D003319 ORTHO05D003739 2.1e-07 60.8 242 33.5
Haze_22463 Corylus avellana HOM05D003319 ORTHO05D003739 4.7e-07 59.7 258 31.8
Oeu018565.2 Olea europaea HOM05D003319 ORTHO05D003739 4.7e-07 59.7 232 31.5
QL01p017023 Quercus lobata HOM05D003319 ORTHO05D003739 6.2e-07 59.3 283 31.1
Sabra02G0083800 Salix brachista HOM05D003319 ORTHO05D003739 6.2e-07 59.3 242 33.5
DCAR_012854 Daucus carota HOM05D003319 ORTHO05D003739 2.4e-06 57.4 146 37.0
CiPaw.08G055800 Carya illinoinensis HOM05D003319 ORTHO05D003739 3.1e-06 57.0 258 33.3
CsaV3_2G030210 Cucumis sativus L. HOM05D003319 ORTHO05D003739 5.2e-06 56.2 137 35.0
Migut.F01437 Erythranthe guttata HOM05D003319 ORTHO05D003739 5.2e-06 56.2 254 34.3
MD08G1198900 Malus domestica HOM05D003319 ORTHO05D003739 5.2e-06 56.2 195 34.4
PSO170G3999 Papaver somniferum HOM05D003319 ORTHO05D003739 8.9e-06 55.5 140 38.6


User provided reference genes

Program Settings