Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002023 Solanum tuberosum HOM05D004973 ORTHO05D006119 7.9e-43 176.8 95 100.0
PGSC0003DMG400018718 Solanum tuberosum HOM05D004973 ORTHO05D006119 8.2e-32 140.2 95 85.3
Nitab4.5_0007045g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 7.7e-22 107.1 104 62.5
Nitab4.5_0000643g0210 Nicotiana tabacum HOM05D004973 ORTHO05D006119 1.9e-20 102.4 87 69.0
Peaxi162Scf00597g00824 Petunia axillaris HOM05D004973 ORTHO05D006119 4.2e-20 101.3 88 69.3
CAN.G608.34 Capsicum annuum HOM05D004973 ORTHO05D006119 1.5e-17 92.8 101 60.4
Nitab4.5_0000202g0430 Nicotiana tabacum HOM05D004973 ORTHO05D006119 6.3e-16 87.4 79 62.0
Solyc10g084420.2 Solanum lycopersicum HOM05D004973 ORTHO05D006119 3.1e-15 85.1 73 71.2
CAN.G867.6 Capsicum annuum HOM05D004973 ORTHO05D006119 1.6e-14 82.8 80 61.2
Sopen10g033860 Solanum pennellii HOM05D004973 ORTHO05D006119 2.0e-14 82.4 64 71.9
CAN.G867.2 Capsicum annuum HOM05D004973 ORTHO05D006119 1.0e-13 80.1 79 60.8
Nitab4.5_0016310g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 2.3e-13 79.0 79 62.0
Peaxi162Scf00472g00079 Petunia axillaris HOM05D004973 ORTHO05D006119 2.9e-13 78.6 67 62.7
Actinidia19731 Actinidia chinensis HOM05D004973 ORTHO05D006119 5.0e-13 77.8 77 59.7
Hma1.2p1_0111F.1_g053560 Hydrangea macrophylla HOM05D004973 ORTHO05D006119 6.5e-13 77.4 74 59.5
PGSC0003DMG400011051 Solanum tuberosum HOM05D004973 ORTHO05D006119 1.9e-12 75.9 62 71.0
Oeu060067.1 Olea europaea HOM05D004973 ORTHO05D006119 7.2e-12 73.9 81 55.6
Cc06_g03330 Coffea canephora HOM05D004973 ORTHO05D006119 6.1e-11 70.9 80 55.0
Dinv35683 Davidia involucrata HOM05D004973 ORTHO05D006119 1.4e-10 69.7 83 49.4
Dinv37236 Davidia involucrata HOM05D004973 ORTHO05D006119 1.8e-10 69.3 83 48.2
Migut.L01647 Erythranthe guttata HOM05D004973 ORTHO05D006119 2.3e-10 68.9 67 56.7
Haze_20682 Corylus avellana HOM05D004973 ORTHO05D006119 1.5e-09 66.2 70 55.7
CSS0037973 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 2.0e-09 65.9 78 51.3
MSTRG.10290 Avicennia marina HOM05D004973 ORTHO05D006119 5.7e-09 64.3 89 40.4
RhsimUnG0120800 Rhododendron simsii HOM05D004973 ORTHO05D006119 7.5e-09 63.9 65 52.3
QL07p045858 Quercus lobata HOM05D004973 ORTHO05D006119 1.7e-08 62.8 69 49.3
Sabra06G0166700 Salix brachista HOM05D004973 ORTHO05D006119 2.2e-08 62.4 75 49.3
SalBow4G1465 Salvia bowleyana HOM05D004973 ORTHO05D006119 2.2e-08 62.4 70 45.7
CSS0000366 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 3.7e-08 61.6 59 59.3
CSS0008181 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 3.7e-08 61.6 59 59.3
COL.COLO4_10304 Corchorus olitorius HOM05D004973 ORTHO05D006119 8.3e-08 60.5 73 53.4
vmacro20083 Vaccinium macrocarpon HOM05D004973 ORTHO05D006119 1.8e-07 59.3 90 44.4
CiPaw.09G185000 Carya illinoinensis HOM05D004973 ORTHO05D006119 3.1e-07 58.5 70 48.6
Oeu029113.1 Olea europaea HOM05D004973 ORTHO05D006119 5.4e-07 57.8 69 50.7
Potri.006G216300 Populus trichocarpa HOM05D004973 ORTHO05D006119 5.4e-07 57.8 75 46.7
Thecc.05G050500 Theobroma cacao HOM05D004973 ORTHO05D006119 5.4e-07 57.8 80 41.2
Migut.J00395 Erythranthe guttata HOM05D004973 ORTHO05D006119 7.0e-07 57.4 64 45.3
Glyma.10G047400 Glycine max HOM05D004973 ORTHO05D006119 9.2e-07 57.0 77 46.8
VMungo0720G0246 Vigna mungo HOM05D004973 ORTHO05D006119 1.2e-06 56.6 69 52.2
Gohir.D04G116800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 2.7e-06 55.5 78 47.4


User provided reference genes

Program Settings