Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002015 Solanum tuberosum HOM05D007476 ORTHO05D006998 4.8e-74 281.6 199 100.0
Solyc09g007090.4 Solanum lycopersicum HOM05D007476 ORTHO05D006998 1.9e-62 243.0 203 86.2
Sopen09g001950 Solanum pennellii HOM05D007476 ORTHO05D006998 1.9e-62 243.0 201 86.6
Peaxi162Scf00597g00826 Petunia axillaris HOM05D007476 ORTHO05D006998 2.8e-29 132.9 202 61.4
Sopen10g035340 Solanum pennellii HOM05D007476 ORTHO05D006998 1.8e-28 130.2 196 60.7
Solyc10g085970.3 Solanum lycopersicum HOM05D007476 ORTHO05D006998 6.3e-26 121.7 187 59.4
PGSC0003DMG400017597 Solanum tuberosum HOM05D000217 ORTHO05D000121 1.4e-25 120.6 156 65.4
Nitab4.5_0000754g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 4.3e-22 109.0 196 55.1
Nitab4.5_0000643g0260 Nicotiana tabacum HOM05D007476 ORTHO05D006998 2.1e-21 106.7 203 58.6
Nitab4.5_0002073g0060 Nicotiana tabacum HOM05D000217 ORTHO05D000121 5.6e-14 82.0 124 61.3
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 2.1e-13 80.1 191 46.6
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 4.7e-13 79.0 201 47.3
Prupe.6G244900 Prunus persica HOM05D007476 ORTHO05D006998 4.7e-13 79.0 206 48.1
Phvul.001G173200 Phaseolus vulgaris HOM05D007476 ORTHO05D006998 8.0e-13 78.2 193 52.3
COL.COLO4_10302 Corchorus olitorius HOM05D007476 ORTHO05D006998 4.0e-12 75.9 130 63.1
Duzib128G0759 Durio zibethinus HOM05D007476 ORTHO05D006998 6.8e-12 75.1 146 52.7
Gorai.001G248500 Gossypium raimondii HOM05D007476 ORTHO05D006998 4.4e-11 72.4 201 45.3
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 9.8e-11 71.2 191 45.0
Ciclev10012743m.g Citrus clementina HOM05D007476 ORTHO05D006998 1.3e-10 70.9 191 50.3
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 2.2e-10 70.1 156 44.9
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 3.7e-10 69.3 198 38.4
Nitab4.5_0008580g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 8.3e-10 68.2 156 57.7
Gohir.A09G160400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.1e-09 67.8 153 45.1
Glyma.19G176700 Glycine max HOM05D007476 ORTHO05D006998 3.2e-09 66.2 133 63.9
Gohir.D13G096300 Gossypium hirsutum HOM05D007476 ORTHO05D006998 5.4e-09 65.5 176 44.3
Glyma.03G176200 Glycine max HOM05D007476 ORTHO05D006998 9.2e-09 64.7 191 50.8
Atru.chr8.2515 Acer truncatum HOM05D007476 ORTHO05D006998 1.6e-08 63.9 150 51.3
MD04G1111200 Malus domestica HOM05D007476 ORTHO05D006998 2.0e-08 63.5 82 64.6
MD12G1129600 Malus domestica HOM05D007476 ORTHO05D006998 3.5e-08 62.8 203 41.9
Hund12067 Selenicereus undatus HOM05D007476 ORTHO05D006998 6.0e-08 62.0 239 40.2
VMungo1383G2744 Vigna mungo HOM05D007476 ORTHO05D006998 6.0e-08 62.0 192 43.2
Actinidia05282 Actinidia chinensis HOM05D007476 ORTHO05D006998 1.0e-07 61.2 147 50.3
Dinv35685 Davidia involucrata HOM05D007476 ORTHO05D006998 1.0e-07 61.2 157 45.9
Gohir.A04G077400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.0e-07 61.2 139 45.3
Sp6g39810 Schrenkiella parvula HOM05D010138 ORTHO05D006998 1.0e-07 61.2 112 53.6
Eucgr.A01204 Eucalyptus grandis HOM05D007476 ORTHO05D006998 1.3e-07 60.8 137 54.7
CSS0046323 Camellia sinensis var. sinensis HOM05D007476 ORTHO05D006998 2.3e-07 60.1 201 50.2
CiPaw.09G184800 Carya illinoinensis HOM05D007476 ORTHO05D006998 3.0e-07 59.7 240 41.2
Sc20g0004220 Simmondsia chinensis HOM05D007476 ORTHO05D006998 3.0e-07 59.7 146 42.5
HanXRQChr14g0453431 Helianthus annuus HOM05D007476 ORTHO05D006998 3.9e-07 59.3 72 65.3
Oeu026075.1 Olea europaea HOM05D007476 ORTHO05D006998 3.9e-07 59.3 145 44.8
FAN02G2102 Fragaria x ananassa HOM05D007476 ORTHO05D006998 6.6e-07 58.5 132 47.0
Lalb_Chr20g0113001 Lupinus albus HOM05D007476 ORTHO05D006998 1.1e-06 57.8 209 44.5
CiPaw.10G138800 Carya illinoinensis HOM05D007476 ORTHO05D006998 1.5e-06 57.4 210 39.5
Gorai.009G421500 Gossypium raimondii HOM05D007476 ORTHO05D006998 1.5e-06 57.4 185 40.5
THA.LOC104823246 Tarenaya hassleriana HOM05D010138 ORTHO05D006998 2.5e-06 56.6 136 44.9
Gohir.D04G116600 Gossypium hirsutum HOM05D007476 ORTHO05D006998 3.3e-06 56.2 185 40.0
CDE02G0064 Ceratophyllum demersum HOM05D007476 ORTHO05D006998 4.3e-06 55.8 84 59.5
HanXRQChr07g0195971 Helianthus annuus HOM05D007476 ORTHO05D006998 4.3e-06 55.8 82 57.3
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 5.6e-06 55.5 161 50.3
QL07p045831 Quercus lobata HOM05D007476 ORTHO05D006998 5.6e-06 55.5 134 43.3
ECA238G2167 Erigeron canadensis HOM05D007476 ORTHO05D006998 7.3e-06 55.1 157 42.0
FAN05G2812 Fragaria x ananassa HOM05D007476 ORTHO05D006998 7.3e-06 55.1 126 37.3
arahy.Tifrunner.gnm1.ann1.UZX3W4 Arachis hypogaea HOM05D007476 ORTHO05D006998 9.5e-06 54.7 172 43.0
BcaB05g21871 Brassica carinata HOM05D010138 ORTHO05D006998 9.5e-06 54.7 105 55.2
CANSAT80G1705 Cannabis sativa HOM05D007476 ORTHO05D006998 9.5e-06 54.7 178 34.3


User provided reference genes

Program Settings