Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 2.7e-252 874.8 427 100.0
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 8.3e-241 836.6 427 95.8
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 2.0e-239 832.0 427 95.3
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 3.7e-233 811.2 428 92.3
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 8.1e-220 766.9 435 86.4
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 2.3e-214 748.8 438 84.5
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 1.1e-208 729.9 429 84.6
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 1.1e-179 633.6 437 71.4
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 3.1e-179 632.1 439 69.0
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.5e-178 629.8 431 70.3
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 3.8e-177 625.2 442 67.9
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 4.6e-175 618.2 443 69.1
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 8.7e-174 614.0 438 67.4
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 1.5e-173 613.2 443 68.4
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.6e-170 602.4 440 69.5
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 2.9e-169 599.0 435 66.9
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 6.5e-169 597.8 437 66.1
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 3.2e-168 595.5 453 65.6
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 7.2e-168 594.3 437 67.0
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 6.1e-167 591.3 435 66.9
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 1.0e-166 590.5 439 65.4
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 5.1e-166 588.2 437 66.4
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.1e-165 587.0 435 66.2
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.3e-164 583.6 442 64.5
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 5.3e-163 578.2 432 67.6
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 2.0e-162 576.2 428 66.8
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 2.5e-160 569.3 434 65.0
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 5.5e-160 568.2 439 65.6
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 5.1e-158 561.6 449 63.0
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 5.1e-158 561.6 428 65.4
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.1e-157 560.5 437 65.0
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.5e-157 560.1 434 64.3
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 3.3e-157 558.9 446 63.5
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 9.7e-157 557.4 447 63.1
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 1.3e-156 557.0 446 63.0
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.1e-155 553.9 434 64.1
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 1.4e-155 553.5 435 64.1
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 2.6e-154 549.3 393 68.7
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 4.5e-154 548.5 460 60.4
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 5.9e-154 548.1 430 63.0
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 7.7e-154 547.7 450 62.2
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 1.7e-153 546.6 451 61.9
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 2.2e-153 546.2 447 62.0
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 2.9e-153 545.8 440 62.7
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 6.5e-153 544.7 437 63.6
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.1e-152 543.9 441 62.8
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.9e-152 543.1 437 63.6
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 7.2e-152 541.2 436 61.2
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 2.7e-151 539.3 446 61.2
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 3.6e-151 538.9 431 63.1
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 8.0e-151 537.7 451 62.3
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 8.0e-151 537.7 430 63.0
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 1.8e-150 536.6 456 61.2
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 3.0e-150 535.8 443 62.5
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 2.6e-149 532.7 442 60.6
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 4.4e-149 531.9 442 61.8
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 7.4e-149 531.2 432 63.4
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 1.7e-148 530.0 442 60.0
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 3.7e-148 528.9 442 61.1
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 3.1e-147 525.8 447 59.3
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 1.7e-145 520.0 443 57.8
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 3.8e-145 518.8 449 59.9
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 5.0e-145 518.5 428 62.4
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 1.5e-144 516.9 405 63.7
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 9.4e-144 514.2 432 60.9
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 9.4e-144 514.2 457 58.4
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 8.0e-143 511.1 432 60.2
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 1.0e-142 510.8 437 60.6
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 4.0e-142 508.8 432 60.0
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 8.8e-142 507.7 436 59.2
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 2.0e-141 506.5 434 61.1
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 4.4e-141 505.4 429 60.6
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 5.7e-141 505.0 507 52.9
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 9.7e-141 504.2 468 58.5
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 1.3e-140 503.8 498 54.0
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 2.8e-140 502.7 440 58.4
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 5.3e-139 498.4 430 58.6
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 5.3e-139 498.4 428 58.2
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 7.0e-139 498.0 433 58.2
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 2.7e-138 496.1 304 75.7
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 1.7e-137 493.4 326 69.6
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 2.2e-137 493.0 427 59.3
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 1.5e-136 490.3 301 74.8
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.9e-136 490.0 477 56.6
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 6.1e-135 485.0 406 59.1
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 5.4e-131 471.9 303 70.6
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 7.7e-130 468.0 442 56.6
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 1.3e-121 440.7 293 70.3
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 2.6e-117 426.4 445 52.8
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 7.5e-117 424.9 385 57.9
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 7.3e-112 408.3 330 58.8
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 7.3e-112 408.3 330 58.8
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 4.7e-111 405.6 369 57.7
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 4.0e-110 402.5 354 60.7
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 1.7e-108 397.1 433 49.4
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.2e-106 391.0 406 50.5
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 2.1e-106 390.2 268 69.0
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 4.6e-106 389.0 232 75.9
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 6.0e-106 388.7 332 60.2
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 8.6e-105 384.8 301 60.8
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 3.6e-103 379.4 336 56.5
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.5e-101 374.0 218 76.6
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 7.5e-101 371.7 349 56.7
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 2.7e-98 363.2 307 58.0
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 1.9e-96 357.1 344 57.0
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 1.5e-85 320.9 201 76.1
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 9.9e-77 291.6 201 71.6
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 1.9e-72 277.3 208 63.0
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 1.9e-72 277.3 208 63.0
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 4.0e-70 269.6 265 49.4
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 4.2e-67 259.6 278 45.0
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 6.7e-57 225.7 118 80.5
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 3.0e-49 200.3 198 52.0
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 9.7e-48 195.3 252 46.8
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 7.4e-40 169.1 134 59.0
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.1e-35 155.2 152 53.3
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 1.9e-35 154.5 126 57.9
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 3.7e-31 140.2 80 75.0
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 5.9e-29 132.9 70 85.7
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 4.7e-26 123.2 76 77.6
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 3.5e-21 107.1 68 69.1
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 2.0e-16 91.3 53 77.4
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 1.1e-14 85.5 62 62.9
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.1e-10 71.2 120 30.0
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.2e-07 61.2 59 44.1


User provided reference genes

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