Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400001843 Solanum tuberosum HOM05D000017 ORTHO05D000308 4.8e-67 257.7 129 100.0
PGSC0003DMG400035887 Solanum tuberosum HOM05D000017 ORTHO05D000308 6.3e-35 151.0 90 83.3
Sopen06g023150 Solanum pennellii HOM05D000017 ORTHO05D000308 7.2e-31 137.5 100 73.0
Sopen08g021140 Solanum pennellii HOM05D000017 ORTHO05D000308 3.0e-29 132.1 100 71.0
PGSC0003DMG400024422 Solanum tuberosum HOM05D000017 ORTHO05D000308 5.7e-20 101.3 73 68.5
Solyc12g036090.3 Solanum lycopersicum HOM05D000017 ORTHO05D000308 1.8e-18 96.3 79 65.8
Nitab4.5_0006536g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.3e-16 89.4 75 60.0
CAN.G52.17 Capsicum annuum HOM05D002177 ORTHO05D002257 3.0e-16 89.0 75 58.7
Nitab4.5_0002853g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.6e-16 87.4 92 51.1
Nitab4.5_0000868g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.1e-15 87.0 72 58.3
Nitab4.5_0000513g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.5e-15 85.9 71 59.2
Nitab4.5_0000021g0480 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.6e-15 84.7 93 52.7
PGSC0003DMG400043640 Solanum tuberosum HOM05D000017 ORTHO05D000308 7.3e-15 84.3 57 77.2
Sopen07g011610 Solanum pennellii HOM05D000017 ORTHO05D000308 2.8e-14 82.4 96 52.1
Nitab4.5_0004398g0060 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.8e-13 77.8 73 53.4
Peaxi162Scf00880g00014 Petunia axillaris HOM05D000017 ORTHO05D000308 8.9e-13 77.4 121 40.5
Nitab4.5_0001721g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.4e-12 75.5 71 49.3
Nitab4.5_0006129g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.4e-12 75.1 72 48.6
Peaxi162Scf00332g00016 Petunia axillaris HOM05D000017 ORTHO05D000308 1.3e-11 73.6 93 44.1
Peaxi162Scf00254g00038 Petunia axillaris HOM05D000017 ORTHO05D000308 1.7e-11 73.2 93 43.0
Peaxi162Scf00957g00009 Petunia axillaris HOM05D000017 ORTHO05D000308 3.7e-11 72.0 81 46.9
Peaxi162Scf00017g00203 Petunia axillaris HOM05D000017 ORTHO05D000308 4.9e-11 71.6 81 48.1
CAN.G680.22 Capsicum annuum HOM05D000017 ORTHO05D033966 1.4e-10 70.1 52 67.3
Peaxi162Scf00116g00082 Petunia axillaris HOM05D000017 ORTHO05D000308 2.4e-10 69.3 82 45.1
Peaxi162Scf00395g00007 Petunia axillaris HOM05D000017 ORTHO05D000308 2.4e-10 69.3 82 45.1
Peaxi162Scf00966g00126 Petunia axillaris HOM05D000017 ORTHO05D000308 2.4e-10 69.3 82 45.1
Nitab4.5_0007255g0080 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.2e-10 68.9 85 45.9
Peaxi162Scf00445g00412 Petunia axillaris HOM05D000017 ORTHO05D000308 3.2e-10 68.9 81 44.4
Peaxi162Scf00360g00003 Petunia axillaris HOM05D000017 ORTHO05D000308 4.1e-10 68.6 83 43.4
Nitab4.5_0002504g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.4e-10 68.2 69 55.1
Peaxi162Scf00156g00065 Petunia axillaris HOM05D000017 ORTHO05D000308 5.4e-10 68.2 96 40.6
Peaxi162Scf00695g00016 Petunia axillaris HOM05D000017 ORTHO05D000308 5.4e-10 68.2 98 39.8
Nitab4.5_0004719g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 7.0e-10 67.8 109 41.3
Peaxi162Scf00916g00136 Petunia axillaris HOM05D000017 ORTHO05D000308 7.0e-10 67.8 83 45.8
Nitab4.5_0001361g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.2e-10 67.4 80 47.5
Nitab4.5_0001575g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.2e-10 67.4 80 45.0
Nitab4.5_0006052g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.2e-10 67.4 71 47.9
Nitab4.5_0000404g0120 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-09 67.0 71 47.9
PGSC0003DMG400020852 Solanum tuberosum HOM05D000017 ORTHO05D000308 1.2e-09 67.0 86 45.3
PGSC0003DMG400045444 Solanum tuberosum HOM05D000017 ORTHO05D000308 1.2e-09 67.0 87 41.4
Nitab4.5_0008117g0060 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.0e-09 66.2 103 41.7
Nitab4.5_0012940g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.5e-09 65.5 70 47.1
Peaxi162Scf00005g00403 Petunia axillaris HOM05D000017 ORTHO05D000308 3.5e-09 65.5 82 42.7
Peaxi162Scf00543g00048 Petunia axillaris HOM05D000017 ORTHO05D000308 3.5e-09 65.5 82 42.7
Peaxi162Scf01265g00004 Petunia axillaris HOM05D000017 ORTHO05D000308 3.5e-09 65.5 82 42.7
Nitab4.5_0000006g0210 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.6e-09 65.1 95 41.1
Nitab4.5_0004129g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.6e-09 65.1 75 48.0
Sopen11g014530 Solanum pennellii HOM05D000017 ORTHO05D000308 6.0e-09 64.7 86 44.2
Solyc07g021730.3 Solanum lycopersicum HOM05D000017 ORTHO05D000308 7.8e-09 64.3 68 55.9
Nitab4.5_0000183g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.7e-08 63.2 109 41.3
Peaxi162Scf00013g00155 Petunia axillaris HOM05D000017 ORTHO05D000308 2.3e-08 62.8 64 48.4
Peaxi162Scf00105g00103 Petunia axillaris HOM05D000017 ORTHO05D000308 2.3e-08 62.8 61 52.5
Peaxi162Scf00316g01116 Petunia axillaris HOM05D000017 ORTHO05D000308 2.3e-08 62.8 64 48.4
Nitab4.5_0000373g0290 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.9e-08 62.0 122 36.1
Peaxi162Scf00799g00043 Petunia axillaris HOM05D000017 ORTHO05D000308 3.9e-08 62.0 78 43.6
Nitab4.5_0001674g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.6e-08 61.2 61 50.8
Peaxi162Scf00014g00092 Petunia axillaris HOM05D000017 ORTHO05D000308 6.6e-08 61.2 64 48.4
Solyc11g013210.3 Solanum lycopersicum HOM05D000017 ORTHO05D000308 6.6e-08 61.2 83 44.6
Nitab4.5_0001215g0110 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.6e-08 60.8 77 44.2
Peaxi162Scf00540g00028 Petunia axillaris HOM05D000017 ORTHO05D000308 8.6e-08 60.8 64 46.9
PGSC0003DMG400036967 Solanum tuberosum HOM05D019058 ORTHO05D395380 1.1e-07 60.5 29 96.6
PGSC0003DMG400041164 Solanum tuberosum HOM05D000017 ORTHO05D000308 1.5e-07 60.1 60 50.0
Peaxi162Scf00048g00042 Petunia axillaris HOM05D000017 ORTHO05D000308 1.9e-07 59.7 71 45.1
Peaxi162Scf01066g00017 Petunia axillaris HOM05D000017 ORTHO05D000308 1.9e-07 59.7 71 45.1
Nitab4.5_0000897g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.3e-07 58.9 68 47.1
Nitab4.5_0001913g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.3e-07 58.5 97 40.2
Nitab4.5_0002215g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.3e-07 58.5 66 45.5
Nitab4.5_0005946g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.3e-07 58.5 64 46.9
PGSC0003DMG400044492 Solanum tuberosum HOM05D000017 ORTHO05D000308 4.3e-07 58.5 60 48.3
Nitab4.5_0000829g0080 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.6e-07 58.2 69 43.5
Nitab4.5_0010602g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.6e-07 58.2 66 45.5
Nitab4.5_0014124g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.6e-07 58.2 64 46.9
Peaxi162Scf00002g00009 Petunia axillaris HOM05D000017 ORTHO05D000308 5.6e-07 58.2 64 45.3
Peaxi162Scf00145g00078 Petunia axillaris HOM05D000017 ORTHO05D000308 5.6e-07 58.2 71 43.7
Nitab4.5_0003744g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.5e-07 57.4 72 41.7
Nitab4.5_0005858g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.5e-07 57.4 66 45.5
Peaxi162Scf00402g00071 Petunia axillaris HOM05D000017 ORTHO05D000308 9.5e-07 57.4 93 43.0
Peaxi162Scf01265g00028 Petunia axillaris HOM05D000017 ORTHO05D000308 9.5e-07 57.4 93 43.0
Nitab4.5_0003266g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-06 57.0 69 44.9
Nitab4.5_0019234g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-06 57.0 52 50.0
Nitab4.5_0006826g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.6e-06 56.6 75 45.3
Nitab4.5_0008180g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.6e-06 56.6 70 42.9
Peaxi162Scf00454g00036 Petunia axillaris HOM05D000017 ORTHO05D000308 1.6e-06 56.6 62 50.0
Solyc08g067405.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 1.6e-06 56.6 96 37.5
Sopen03g016270 Solanum pennellii HOM05D000017 ORTHO05D000308 2.1e-06 56.2 86 40.7
PGSC0003DMG400047274 Solanum tuberosum HOM05D000017 ORTHO05D000308 2.8e-06 55.8 71 40.8
Nitab4.5_0004148g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.6e-06 55.5 56 48.2
Sopen09g016780 Solanum pennellii HOM05D000017 ORTHO05D000308 3.6e-06 55.5 61 44.3
Nitab4.5_0005277g0080 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.7e-06 55.1 95 38.9
Nitab4.5_0026814g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.7e-06 55.1 68 41.2
Peaxi162Scf00139g00823 Petunia axillaris HOM05D000017 ORTHO05D000308 6.2e-06 54.7 67 46.3
Peaxi162Scf00562g00051 Petunia axillaris HOM05D000017 ORTHO05D000308 6.2e-06 54.7 60 50.0
Peaxi162Scf00901g00215 Petunia axillaris HOM05D000017 ORTHO05D000308 6.2e-06 54.7 78 44.9
Nitab4.5_0002368g0080 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.1e-06 54.3 71 42.3
Peaxi162Scf00057g02218 Petunia axillaris HOM05D000017 ORTHO05D000308 8.1e-06 54.3 93 41.9
Peaxi162Scf00088g00109 Petunia axillaris HOM05D000017 ORTHO05D000308 8.1e-06 54.3 83 43.4
Peaxi162Scf00178g00132 Petunia axillaris HOM05D000017 ORTHO05D000308 8.1e-06 54.3 93 41.9
Peaxi162Scf00297g00213 Petunia axillaris HOM05D000017 ORTHO05D000308 8.1e-06 54.3 93 41.9
Peaxi162Scf00310g00082 Petunia axillaris HOM05D000017 ORTHO05D000308 8.1e-06 54.3 93 41.9
Peaxi162Scf00471g00071 Petunia axillaris HOM05D000017 ORTHO05D000308 8.1e-06 54.3 93 41.9
Peaxi162Scf00760g00110 Petunia axillaris HOM05D000017 ORTHO05D000308 8.1e-06 54.3 93 41.9
Peaxi162Scf00802g00132 Petunia axillaris HOM05D000017 ORTHO05D000308 8.1e-06 54.3 93 41.9
Peaxi162Scf00804g00011 Petunia axillaris HOM05D000017 ORTHO05D000308 8.1e-06 54.3 93 41.9
Peaxi162Scf00823g00010 Petunia axillaris HOM05D000017 ORTHO05D000308 8.1e-06 54.3 93 41.9
Solyc11g042455.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 8.1e-06 54.3 69 42.0
Sopen12g007680 Solanum pennellii HOM05D000017 ORTHO05D000308 8.1e-06 54.3 62 43.5
Sopen12g012890 Solanum pennellii HOM05D000017 ORTHO05D000308 8.1e-06 54.3 72 40.3


User provided reference genes

Program Settings