Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 1.3e-263 912.5 483 100.0
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 8.8e-239 830.1 483 92.1
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 1.1e-238 829.7 483 92.1
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 3.3e-193 678.7 482 76.1
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 3.0e-186 655.6 485 74.0
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 1.9e-153 546.6 483 65.4
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 6.1e-131 471.9 257 94.9
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 6.6e-93 345.5 503 46.1
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 7.8e-86 322.0 496 47.0
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 2.0e-78 297.4 457 45.1
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 3.0e-77 293.5 493 42.4
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 5.0e-77 292.7 497 42.1
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 2.8e-75 287.0 461 44.3
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 6.4e-72 275.8 514 38.5
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 2.9e-64 250.4 486 40.9
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 1.9e-63 247.7 504 38.7
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 7.1e-63 245.7 494 39.9
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 4.6e-62 243.0 492 39.0
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 3.9e-61 240.0 495 39.0
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 1.5e-60 238.0 422 41.9
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 1.9e-60 237.7 378 46.0
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 3.3e-60 236.9 503 38.4
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 1.2e-59 235.0 306 49.3
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 3.6e-59 233.4 452 39.4
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 8.1e-59 232.3 491 38.7
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 4.0e-58 229.9 359 46.0
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 2.0e-57 227.6 377 42.7
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 4.4e-57 226.5 309 49.8
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 1.4e-55 221.5 387 45.2
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 3.2e-55 220.3 385 43.6
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 4.2e-55 219.9 359 44.6
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 2.1e-54 217.6 399 40.9
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 3.5e-54 216.9 487 37.6
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 6.0e-54 216.1 336 46.1
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 6.0e-54 216.1 309 47.2
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 3.0e-53 213.8 380 41.8
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 3.3e-52 210.3 356 41.3
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 9.6e-52 208.8 281 47.3
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 2.1e-51 207.6 369 42.3
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 8.1e-51 205.7 256 52.0
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 1.1e-50 205.3 263 49.4
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 6.9e-50 202.6 333 43.5
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 9.0e-50 202.2 570 34.0
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 1.3e-48 198.4 329 45.0
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.4e-47 194.1 324 45.4
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 5.4e-47 193.0 389 38.8
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 9.3e-47 192.2 316 45.6
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 1.2e-46 191.8 389 38.6
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 2.1e-46 191.0 389 38.0
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 3.5e-46 190.3 357 41.5
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 7.8e-46 189.1 386 40.2
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 2.3e-45 187.6 260 45.8
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 6.6e-45 186.0 362 39.0
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 4.3e-44 183.3 311 43.4
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 6.2e-43 179.5 300 40.7
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 5.3e-42 176.4 357 36.7
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 1.5e-41 174.9 346 38.2
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 2.0e-41 174.5 386 38.1
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 3.4e-41 173.7 368 38.0
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 5.8e-41 172.9 333 42.6
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 5.8e-41 172.9 388 38.4
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 2.2e-40 171.0 314 40.4
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 2.2e-40 171.0 348 37.1
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 2.9e-40 170.6 398 37.2
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 6.4e-40 169.5 374 39.8
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 1.4e-39 168.3 316 42.4
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 9.3e-39 165.6 366 38.3
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 1.2e-38 165.2 390 37.7
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 7.9e-38 162.5 320 40.0
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 1.0e-37 162.2 312 38.5
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 3.0e-37 160.6 387 37.5
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 3.0e-37 160.6 375 37.3
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 1.5e-36 158.3 380 36.3
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 3.3e-36 157.1 361 36.3
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 4.3e-36 156.8 222 49.1
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 5.6e-36 156.4 349 38.7
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 1.3e-35 155.2 370 36.2
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 2.8e-35 154.1 306 35.9
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 2.8e-35 154.1 378 36.8
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 6.2e-35 152.9 297 40.1
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 4.0e-34 150.2 371 37.2
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 1.5e-33 148.3 249 43.8
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 4.5e-33 146.7 279 39.1
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 1.3e-32 145.2 244 43.4
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 1.6e-30 138.3 248 37.9
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 4.6e-30 136.7 372 33.1
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 6.0e-30 136.3 245 41.6
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 8.7e-29 132.5 316 37.7
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 2.6e-25 120.9 216 37.5
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 6.1e-22 109.8 232 39.2
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 1.8e-21 108.2 94 60.6
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 3.9e-21 107.1 347 33.7
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 1.5e-20 105.1 113 56.6
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 2.3e-13 81.3 223 32.7
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 2.5e-12 77.8 89 47.2
TAR625G1494 Trochodendron aralioides HOM05D005497 ORTHO05D006733 3.1e-10 70.9 237 28.7
Actinidia04644 Actinidia chinensis HOM05D007360 ORTHO05D008235 9.1e-10 69.3 57 61.4
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 9.1e-10 69.3 57 61.4
Actinidia28468 Actinidia chinensis HOM05D007360 ORTHO05D008235 9.1e-10 69.3 57 61.4
Actinidia33720 Actinidia chinensis HOM05D007360 ORTHO05D008235 9.1e-10 69.3 57 61.4
AagrBONN_evm.TU.Sc2ySwM_228.3362 Anthoceros agrestis HOM05D018912 ORTHO05D021275 9.1e-10 69.3 277 28.5
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 2.6e-09 67.8 125 41.6
Manes.09G079705 Manihot esculenta HOM05D007360 ORTHO05D008235 4.5e-09 67.0 53 64.2
FvH4_2g41090 Fragaria vesca HOM05D005497 ORTHO05D006733 1.7e-08 65.1 280 28.9
FAN15G1151 Fragaria x ananassa HOM05D005497 ORTHO05D006733 1.1e-07 62.4 247 26.3
Nn2g12349 Nelumbo nucifera HOM05D005497 ORTHO05D006733 4.2e-07 60.5 247 26.3
SMO116G0351 Selaginella moellendorffii HOM05D005497 ORTHO05D006733 1.2e-06 58.9 151 36.4
Hma1.2p1_1284F.1_g272900 Hydrangea macrophylla HOM05D005497 ORTHO05D006733 1.6e-06 58.5 304 24.3
SMO367G0340 Selaginella moellendorffii HOM05D018912 ORTHO05D004121 2.7e-06 57.8 225 26.7
Oeu063812.1 Olea europaea HOM05D007360 ORTHO05D008235 6.1e-06 56.6 107 37.4


User provided reference genes

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