Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 2.1e-129 465.7 228 100.0
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.5e-127 459.5 228 98.2
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 7.3e-127 457.2 228 97.8
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 6.6e-120 434.1 228 90.4
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 3.3e-119 431.8 228 90.8
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 9.5e-119 430.3 227 89.9
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 3.8e-107 391.7 229 79.9
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 6.4e-107 391.0 226 84.1
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.4e-106 389.8 229 79.5
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 2.1e-105 386.0 231 78.8
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 3.5e-105 385.2 224 81.2
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 4.6e-105 384.8 224 79.0
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 1.3e-104 383.3 228 80.3
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.1e-103 380.2 219 80.4
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 1.1e-103 380.2 229 78.6
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.5e-103 379.8 221 79.6
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 5.6e-103 377.9 224 78.6
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 9.6e-103 377.1 223 78.9
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 2.1e-102 375.9 225 79.1
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 3.6e-102 375.2 226 79.2
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.8e-101 372.9 226 78.8
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 2.4e-101 372.5 227 76.7
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 3.1e-101 372.1 223 76.7
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 5.3e-101 371.3 228 75.4
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.2e-100 370.2 229 75.5
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 1.5e-100 369.8 215 78.6
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.5e-100 369.8 225 76.0
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 2.6e-100 369.0 226 74.3
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 2.6e-100 369.0 226 75.2
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.4e-100 368.6 226 75.2
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 4.5e-100 368.2 229 75.1
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 1.3e-99 366.7 196 84.7
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 2.2e-99 365.9 218 77.1
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 2.2e-99 365.9 218 77.5
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 3.8e-99 365.2 214 78.5
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 3.8e-99 365.2 213 77.9
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 6.4e-99 364.4 225 74.2
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.1e-98 363.6 219 76.3
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 4.2e-98 361.7 214 77.6
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 7.1e-98 360.9 215 76.3
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 7.1e-98 360.9 214 77.1
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.2e-97 360.1 217 76.0
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.7e-97 359.0 217 75.6
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 7.9e-97 357.5 215 77.2
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 7.9e-97 357.5 214 75.2
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.0e-96 357.1 214 76.2
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 1.0e-96 357.1 219 74.4
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 1.0e-96 357.1 231 72.7
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.0e-96 355.5 217 74.7
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 5.1e-96 354.8 222 73.4
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 8.7e-96 354.0 221 75.1
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 1.5e-95 353.2 215 75.3
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.3e-95 352.1 238 71.0
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 4.3e-95 351.7 226 70.4
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 9.6e-95 350.5 220 71.4
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 9.6e-95 350.5 223 72.2
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 2.1e-94 349.4 219 72.1
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 2.8e-94 349.0 215 74.4
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 2.8e-94 349.0 220 70.9
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 3.7e-94 348.6 214 74.8
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 4.8e-94 348.2 247 68.0
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 6.2e-94 347.8 220 71.4
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 6.2e-94 347.8 215 74.0
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 8.1e-94 347.4 220 70.9
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 8.1e-94 347.4 220 72.3
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 1.8e-93 346.3 225 68.9
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 2.4e-93 345.9 221 72.9
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 3.1e-93 345.5 220 70.0
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 3.1e-93 345.5 220 70.0
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 6.9e-93 344.4 220 69.5
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 6.9e-93 344.4 217 73.7
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 6.9e-93 344.4 207 75.8
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 3.4e-92 342.0 220 69.5
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 4.5e-92 341.7 225 68.4
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 4.5e-92 341.7 225 68.4
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 5.8e-92 341.3 220 70.5
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 1.0e-91 340.5 230 68.3
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 1.3e-91 340.1 221 69.2
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 1.3e-91 340.1 230 68.3
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.3e-91 340.1 226 69.5
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 1.3e-91 340.1 228 69.3
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.3e-91 340.1 225 70.2
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.3e-91 340.1 311 56.6
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 2.2e-91 339.3 229 68.1
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 2.9e-91 339.0 220 70.0
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 4.9e-91 338.2 231 68.4
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 4.9e-91 338.2 217 71.4
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 8.4e-91 337.4 229 67.7
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.9e-90 336.3 215 72.1
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 2.5e-90 335.9 223 70.0
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 5.5e-90 334.7 218 70.2
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 1.2e-89 333.6 196 76.5
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 1.2e-89 333.6 214 70.1
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 7.9e-89 330.9 267 62.2
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 2.3e-88 329.3 216 69.9
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 2.4e-85 319.3 212 71.7
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 1.3e-83 313.5 226 63.3
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 2.3e-80 302.8 200 70.0
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 4.3e-79 298.5 208 67.8
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 5.7e-79 298.1 174 78.2
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 8.2e-78 294.3 165 81.2
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 6.9e-77 291.2 170 78.8
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 4.8e-70 268.5 228 59.2
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 2.4e-69 266.2 214 59.8
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.7e-67 260.0 216 58.8
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.0e-64 250.8 226 53.1
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 5.7e-55 218.4 139 74.1
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 7.0e-53 211.5 216 53.2
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 5.7e-47 191.8 101 85.1
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 5.0e-43 178.7 127 64.6
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 2.5e-42 176.4 212 44.3
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 2.5e-42 176.4 225 43.1
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 3.4e-39 166.0 208 45.7
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 9.1e-37 157.9 96 75.0
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 5.9e-36 155.2 95 75.8
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 5.0e-35 152.1 213 40.8
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.3e-34 149.4 95 74.7
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.3e-34 149.4 95 74.7
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 8.9e-32 141.4 110 65.5
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.6e-31 139.8 85 71.8
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.3e-30 135.2 93 73.1
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 3.5e-28 129.4 96 65.6
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 8.6e-27 124.8 119 53.8
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 8.6e-27 124.8 119 53.8
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 4.0e-24 115.9 84 65.5
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 6.4e-22 108.6 79 68.4
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.9e-21 107.1 188 38.3
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 4.1e-21 105.9 60 80.0
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 6.2e-17 92.0 52 78.8
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 8.9e-16 88.2 171 32.7
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 2.2e-14 83.6 48 77.1
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 2.1e-09 67.0 55 60.0


User provided reference genes

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