Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400001303 Solanum tuberosum HOM05D000541 ORTHO05D000137 4.6e-121 438.3 300 100.0
PGSC0003DMG400025087 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.4e-93 346.3 190 89.5
PGSC0003DMG400040825 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.5e-50 203.4 109 90.8
PGSC0003DMG400026507 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.3e-46 191.0 106 87.7
PGSC0003DMG400010858 Solanum tuberosum HOM05D012110 ORTHO05D014566 8.3e-46 188.3 97 92.8
PGSC0003DMG400006647 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.4e-45 187.6 114 95.6
Sopen11g025370 Solanum pennellii HOM05D000541 ORTHO05D000137 6.0e-44 182.2 187 52.9
CAN.G1242.2 Capsicum annuum HOM05D000541 ORTHO05D000137 6.2e-41 172.2 153 52.3
CAN.G98.8 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-40 171.0 159 54.1
CAN.G959.21 Capsicum annuum HOM05D000541 ORTHO05D000137 4.0e-40 169.5 192 46.9
CAN.G1236.4 Capsicum annuum HOM05D000541 ORTHO05D000137 5.2e-40 169.1 134 59.7
CAN.G137.41 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-39 167.9 192 45.3
CAN.G371.112 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-37 160.6 192 44.8
CAN.G843.42 Capsicum annuum HOM05D000541 ORTHO05D000137 5.4e-37 159.1 155 51.0
CAN.G315.4 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-36 157.5 134 56.7
PGSC0003DMG400002374 Solanum tuberosum HOM05D000541 ORTHO05D000137 4.6e-36 156.0 123 63.4
CAN.G567.26 Capsicum annuum HOM05D000541 ORTHO05D000137 7.8e-36 155.2 192 45.3
CAN.G21.3 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-34 151.4 153 49.7
CAN.G724.18 Capsicum annuum HOM05D000541 ORTHO05D000137 9.5e-34 148.3 175 46.3
CAN.G1328.10 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-33 147.9 148 50.0
CAN.G572.21 Capsicum annuum HOM05D000541 ORTHO05D000137 3.1e-32 143.3 118 57.6
CAN.G179.6 Capsicum annuum HOM05D000541 ORTHO05D000137 7.6e-31 138.7 120 54.2
CAN.G290.11 Capsicum annuum HOM05D000541 ORTHO05D000137 8.4e-30 135.2 191 40.3
CAN.G730.32 Capsicum annuum HOM05D000541 ORTHO05D000137 4.1e-29 132.9 190 40.0
CAN.G681.13 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-28 130.6 122 54.1
CAN.G467.20 Capsicum annuum HOM05D000541 ORTHO05D000137 3.5e-28 129.8 192 39.1
CAN.G634.10 Capsicum annuum HOM05D000541 ORTHO05D000137 6.0e-28 129.0 134 47.8
CAN.G375.69 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-27 128.3 191 39.8
PGSC0003DMG400017393 Solanum tuberosum HOM05D007732 ORTHO05D010105 1.3e-27 127.9 118 51.7
Sopen05g014530 Solanum pennellii HOM05D007732 ORTHO05D010105 1.7e-27 127.5 125 52.0
CAN.G89.5 Capsicum annuum HOM05D000541 ORTHO05D000137 2.3e-27 127.1 155 45.2
CAN.G1132.13 Capsicum annuum HOM05D001619 ORTHO05D000137 1.5e-26 124.4 134 48.5
CAN.G184.46 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-25 121.3 192 37.5
Peaxi162Scf00318g00042 Petunia axillaris HOM05D024560 ORTHO05D000482 4.7e-25 119.4 140 44.3
CAN.G597.9 Capsicum annuum HOM05D000326 ORTHO05D000137 5.2e-24 115.9 107 52.3
CAN.G23.8 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-23 114.4 101 52.5
CAN.G176.17 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-23 114.0 107 51.4
CAN.G327.7 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-23 114.0 107 51.4
CAN.G587.42 Capsicum annuum HOM05D000541 ORTHO05D000137 4.4e-23 112.8 107 52.3
CAN.G156.4 Capsicum annuum HOM05D000541 ORTHO05D000137 7.6e-23 112.1 99 54.5
CAN.G464.6 Capsicum annuum HOM05D000541 ORTHO05D000137 9.9e-23 111.7 111 51.4
CAN.G516.1 Capsicum annuum HOM05D000541 ORTHO05D000137 2.2e-22 110.5 108 50.9
CAN.G59.18 Capsicum annuum HOM05D000541 ORTHO05D000137 6.4e-22 109.0 84 60.7
CAN.G79.75 Capsicum annuum HOM05D000541 ORTHO05D000137 8.4e-22 108.6 106 50.9
CAN.G370.96 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-21 107.8 97 52.6
PGSC0003DMG400010307 Solanum tuberosum HOM05D000541 ORTHO05D037675 1.4e-21 107.8 85 63.5
CAN.G112.19 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-21 107.1 120 48.3
CAN.G1358.1 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-21 107.1 106 50.0
CAN.G801.10 Capsicum annuum HOM05D000541 ORTHO05D000137 4.2e-21 106.3 107 49.5
CAN.G786.22 Capsicum annuum HOM05D000541 ORTHO05D000137 7.1e-21 105.5 130 46.2
CAN.G157.1 Capsicum annuum HOM05D000541 ORTHO05D000137 9.3e-21 105.1 192 35.4
CAN.G320.5 Capsicum annuum HOM05D000541 ORTHO05D000137 9.3e-21 105.1 84 57.1
CAN.G1181.32 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-20 104.4 155 40.0
CAN.G1104.11 Capsicum annuum HOM05D000541 ORTHO05D000137 7.8e-20 102.1 81 60.5
CAN.G625.33 Capsicum annuum HOM05D000541 ORTHO05D000137 7.8e-20 102.1 99 51.5
CAN.G1139.3 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-19 101.7 192 35.4
CAN.G67.14 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-19 101.7 88 54.5
CAN.G724.44 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-19 100.9 107 48.6
CAN.G1373.2 Capsicum annuum HOM05D000541 ORTHO05D000137 2.3e-19 100.5 102 50.0
CAN.G1756.4 Capsicum annuum HOM05D000541 ORTHO05D000137 3.0e-19 100.1 107 49.5
CAN.G289.62 Capsicum annuum HOM05D000541 ORTHO05D000137 3.9e-19 99.8 82 56.1
CAN.G313.6 Capsicum annuum HOM05D000541 ORTHO05D000137 8.7e-19 98.6 105 48.6
CAN.G1006.6 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-18 97.4 81 56.8
CAN.G305.20 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-18 97.4 127 41.7
CAN.G1390.2 Capsicum annuum HOM05D000541 ORTHO05D000137 2.5e-18 97.1 92 52.2
CAN.G628.67 Capsicum annuum HOM05D000541 ORTHO05D000137 2.5e-18 97.1 92 54.3
CAN.G18.14 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-18 96.7 92 51.1
CAN.G578.15 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-17 94.7 85 54.1
CAN.G134.37 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-17 93.2 121 42.1
CAN.G8.9 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-17 93.2 70 62.9
CAN.G801.3 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-17 93.2 88 53.4
Sopen05g025460 Solanum pennellii HOM05D000541 ORTHO05D014566 3.6e-17 93.2 54 74.1
CAN.G1469.8 Capsicum annuum HOM05D000541 ORTHO05D000137 6.2e-17 92.4 68 66.2
CAN.G134.209 Capsicum annuum HOM05D000541 ORTHO05D000137 8.1e-17 92.0 116 42.2
CAN.G181.50 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-16 91.7 70 61.4
CAN.G358.143 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-16 91.7 89 52.8
CAN.G849.14 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-16 91.7 116 45.7
CAN.G22.33 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-16 90.5 78 55.1
CAN.G22.13 Capsicum annuum HOM05D000541 ORTHO05D000137 4.0e-16 89.7 91 51.6
CAN.G74.30 Capsicum annuum HOM05D000541 ORTHO05D000137 6.9e-16 89.0 118 40.7
CAN.G158.26 Capsicum annuum HOM05D000541 ORTHO05D000137 9.0e-16 88.6 75 57.3
CAN.G888.1 Capsicum annuum HOM05D000218 ORTHO05D000125 9.0e-16 88.6 77 53.2
CAN.G267.21 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-15 87.8 70 60.0
Sopen10g008840 Solanum pennellii HOM05D012110 ORTHO05D014566 1.5e-15 87.8 130 41.5
CAN.G418.2 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-15 87.4 84 50.0
CAN.G771.75 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-15 87.4 94 45.7
CAN.G280.18 Capsicum annuum HOM05D000376 ORTHO05D000237 2.2e-14 84.0 188 29.8
CAN.G954.1 Capsicum annuum HOM05D000541 ORTHO05D000137 4.9e-14 82.8 78 50.0
CAN.G184.69 Capsicum annuum HOM05D002308 ORTHO05D002535 6.4e-14 82.4 78 50.0
CAN.G220.3 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-13 81.3 80 48.8
CAN.G498.5 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-13 81.3 94 43.6
CAN.G699.5 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-13 80.9 116 39.7
CAN.G321.7 Capsicum annuum HOM05D000541 ORTHO05D000137 4.2e-13 79.7 111 39.6
CAN.G474.4 Capsicum annuum HOM05D000541 ORTHO05D000365 4.2e-13 79.7 73 53.4
CAN.G616.29 Capsicum annuum HOM05D000541 ORTHO05D000137 9.3e-13 78.6 57 61.4
CAN.G43.25 Capsicum annuum HOM05D000070 ORTHO05D000137 2.1e-12 77.4 70 50.0
CAN.G222.34 Capsicum annuum HOM05D000541 ORTHO05D000137 2.7e-12 77.0 59 55.9
CAN.G840.3 Capsicum annuum HOM05D000541 ORTHO05D000137 4.6e-12 76.3 78 48.7
Nitab4.5_0000209g0160 Nicotiana tabacum HOM05D009490 ORTHO05D011730 4.6e-12 76.3 114 38.6
CAN.G102.1 Capsicum annuum HOM05D000541 ORTHO05D000137 6.0e-12 75.9 73 50.7
CAN.G71.14 Capsicum annuum HOM05D000541 ORTHO05D000137 1.8e-11 74.3 106 42.5
Nitab4.5_0004703g0010 Nicotiana tabacum HOM05D009490 ORTHO05D011730 1.8e-11 74.3 114 36.8
Nitab4.5_0009401g0030 Nicotiana tabacum HOM05D009490 ORTHO05D011730 1.8e-11 74.3 114 38.6
CAN.G18.5 Capsicum annuum HOM05D000541 ORTHO05D000137 2.3e-11 73.9 74 48.6
CAN.G419.19 Capsicum annuum HOM05D000541 ORTHO05D000137 2.3e-11 73.9 107 40.2
CAN.G1181.29 Capsicum annuum HOM05D000541 ORTHO05D000137 3.9e-11 73.2 107 41.1
CAN.G182.22 Capsicum annuum HOM05D000541 ORTHO05D000137 5.1e-11 72.8 84 47.6
CAN.G606.27 Capsicum annuum HOM05D000541 ORTHO05D000137 8.7e-11 72.0 107 40.2
CAN.G283.8 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-10 71.6 156 33.3
CAN.G786.25 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-10 70.9 105 39.0
Nitab4.5_0002918g0100 Nicotiana tabacum HOM05D009490 ORTHO05D011730 1.9e-10 70.9 110 36.4
CAN.G266.2 Capsicum annuum HOM05D000541 ORTHO05D000137 4.3e-10 69.7 89 41.6
CAN.G1040.11 Capsicum annuum HOM05D000541 ORTHO05D000137 5.6e-10 69.3 106 38.7
CAN.G2123.2 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-09 68.2 74 44.6
CAN.G468.11 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-09 68.2 106 39.6
Nitab4.5_0000574g0210 Nicotiana tabacum HOM05D009490 ORTHO05D011730 1.3e-09 68.2 114 36.8
CAN.G261.7 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-09 67.0 106 40.6
CAN.G439.10 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-09 67.0 83 44.6
CAN.G773.9 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-09 67.0 60 53.3
CAN.G1546.3 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-09 66.6 107 40.2
Nitab4.5_0000045g0180 Nicotiana tabacum HOM05D009490 ORTHO05D011730 4.8e-09 66.2 114 36.0
CAN.G424.12 Capsicum annuum HOM05D000541 ORTHO05D000137 6.2e-09 65.9 155 32.9
Sopen01g028070 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-08 65.1 125 30.4
CAN.G135.44 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-08 64.7 84 44.0
CAN.G311.37 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-08 64.7 58 50.0
Nitab4.5_0001164g0070 Nicotiana tabacum HOM05D009490 ORTHO05D011730 2.4e-08 63.9 112 36.6
CAN.G2210.1 Capsicum annuum HOM05D000541 ORTHO05D000137 3.1e-08 63.5 88 42.0
PGSC0003DMG400044307 Solanum tuberosum HOM05D013289 ORTHO05D000137 3.1e-08 63.5 84 44.0
CAN.G1079.1 Capsicum annuum HOM05D000541 ORTHO05D000137 4.0e-08 63.2 92 38.0
CAN.G91.4 Capsicum annuum HOM05D000541 ORTHO05D000137 5.3e-08 62.8 58 50.0
Sopen04g015670 Solanum pennellii HOM05D007732 ORTHO05D010105 1.5e-07 61.2 82 39.0
CAN.G1334.14 Capsicum annuum HOM05D000541 ORTHO05D000137 3.4e-07 60.1 53 56.6
CAN.G143.37 Capsicum annuum HOM05D000541 ORTHO05D000137 4.5e-07 59.7 48 58.3
CAN.G92.13 Capsicum annuum HOM05D000541 ORTHO05D000137 4.5e-07 59.7 85 41.2
CAN.G1114.1 Capsicum annuum HOM05D000002 ORTHO05D000001 9.9e-07 58.5 48 58.3
CAN.G1590.5 Capsicum annuum HOM05D000011 ORTHO05D001721 9.9e-07 58.5 45 60.0
CAN.G388.78 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-06 58.2 53 52.8
CAN.G982.29 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-06 58.2 45 60.0
Carub.0002s0943 Capsella rubella HOM05D000675 ORTHO05D000395 2.2e-06 57.4 98 34.7
CAN.G744.11 Capsicum annuum HOM05D000541 ORTHO05D000137 2.2e-06 57.4 94 35.1
CAN.G677.2 Capsicum annuum HOM05D000351 ORTHO05D000137 2.9e-06 57.0 53 49.1
CAN.G164.6 Capsicum annuum HOM05D000541 ORTHO05D000137 3.8e-06 56.6 51 54.9
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 4.9e-06 56.2 93 31.2
CAN.G201.50 Capsicum annuum HOM05D000541 ORTHO05D000137 6.4e-06 55.8 78 41.0


User provided reference genes

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