Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400001218 Solanum tuberosum HOM05D013030 ORTHO05D013825 2.9e-94 348.6 184 100.0
PGSC0003DMG400001220 Solanum tuberosum HOM05D013030 ORTHO05D013825 8.9e-67 257.3 160 85.6
PGSC0003DMG400001217 Solanum tuberosum HOM05D013030 ORTHO05D013825 4.0e-59 231.9 152 80.9
Sopen10g007630 Solanum pennellii HOM05D013030 ORTHO05D013825 2.2e-49 199.5 182 63.2
PGSC0003DMG400014531 Solanum tuberosum HOM05D013030 ORTHO05D013825 9.3e-48 194.1 137 77.4
PGSC0003DMG400037603 Solanum tuberosum HOM05D013030 ORTHO05D013825 5.3e-35 151.8 106 77.4
PGSC0003DMG400030053 Solanum tuberosum HOM05D000307 ORTHO05D017740 4.2e-32 142.1 311 36.3
PGSC0003DMG400038225 Solanum tuberosum HOM05D000307 ORTHO05D000166 5.7e-29 131.7 246 39.8
PGSC0003DMG400034827 Solanum tuberosum HOM05D000307 ORTHO05D000166 6.9e-27 124.8 298 34.9
PGSC0003DMG400045326 Solanum tuberosum HOM05D000307 ORTHO05D000166 8.5e-25 117.9 254 36.2
Sopen04g014010 Solanum pennellii HOM05D000307 ORTHO05D000166 1.1e-24 117.5 306 33.3
PGSC0003DMG400040524 Solanum tuberosum HOM05D000307 ORTHO05D000166 1.9e-24 116.7 257 37.4
Sopen05g028010 Solanum pennellii HOM05D000307 ORTHO05D000166 2.5e-24 116.3 249 35.3
PGSC0003DMG400001219 Solanum tuberosum HOM05D000307 ORTHO05D000166 1.4e-22 110.5 61 93.4
PGSC0003DMG400039025 Solanum tuberosum HOM05D000307 ORTHO05D000166 1.4e-22 110.5 189 37.6
CAN.G651.10 Capsicum annuum HOM05D000307 ORTHO05D000166 1.8e-22 110.2 234 35.9
CAN.G651.8 Capsicum annuum HOM05D000307 ORTHO05D000166 1.8e-22 110.2 234 35.9
CAN.G226.6 Capsicum annuum HOM05D000307 ORTHO05D000166 7.4e-21 104.8 234 35.0
PGSC0003DMG400036490 Solanum tuberosum HOM05D013030 ORTHO05D000166 3.7e-20 102.4 246 34.6
CAN.G1041.30 Capsicum annuum HOM05D000307 ORTHO05D017740 8.2e-20 101.3 300 31.3
PGSC0003DMG400001216 Solanum tuberosum HOM05D013030 ORTHO05D394584 1.8e-19 100.1 100 59.0
PGSC0003DMG400039358 Solanum tuberosum HOM05D000307 ORTHO05D000166 6.9e-19 98.2 86 64.0
PGSC0003DMG400039186 Solanum tuberosum HOM05D013030 ORTHO05D013825 1.7e-17 93.6 96 54.2
CAN.G651.9 Capsicum annuum HOM05D000307 ORTHO05D000166 3.8e-17 92.4 210 33.8
PGSC0003DMG400035194 Solanum tuberosum HOM05D013030 ORTHO05D000166 3.8e-17 92.4 145 46.9
PGSC0003DMG400044997 Solanum tuberosum HOM05D000307 ORTHO05D000166 5.0e-17 92.0 148 45.3
Sopen05g028030 Solanum pennellii HOM05D000307 ORTHO05D000166 4.2e-16 89.0 133 46.6
PGSC0003DMG400040087 Solanum tuberosum HOM05D013030 ORTHO05D000166 4.2e-16 89.0 145 46.2
Sopen12g029630 Solanum pennellii HOM05D000307 ORTHO05D000166 5.5e-16 88.6 81 59.3
PGSC0003DMG400041221 Solanum tuberosum HOM05D000307 ORTHO05D000166 2.1e-15 86.7 88 59.1
PGSC0003DMG400036018 Solanum tuberosum HOM05D000307 ORTHO05D018876 1.4e-14 84.0 118 43.2
PGSC0003DMG400028638 Solanum tuberosum HOM05D000307 ORTHO05D017740 6.7e-14 81.6 169 40.2
PGSC0003DMG400037579 Solanum tuberosum HOM05D019453 ORTHO05D017740 8.8e-14 81.3 164 37.2
CAN.G1596.7 Capsicum annuum HOM05D001860 ORTHO05D004239 2.0e-13 80.1 80 56.2
PGSC0003DMG400044633 Solanum tuberosum HOM05D000307 ORTHO05D000166 3.3e-13 79.3 146 42.5
PGSC0003DMG400024024 Solanum tuberosum HOM05D000307 ORTHO05D000166 2.2e-12 76.6 118 40.7
Nitab4.5_0001209g0020 Nicotiana tabacum HOM05D000307 ORTHO05D000166 4.8e-12 75.5 114 41.2
Nitab4.5_0000592g0010 Nicotiana tabacum HOM05D000307 ORTHO05D000166 8.2e-12 74.7 130 36.9
Sopen07g022640 Solanum pennellii HOM05D000307 ORTHO05D000166 5.3e-11 72.0 118 38.1
PGSC0003DMG400034685 Solanum tuberosum HOM05D000307 ORTHO05D018876 5.3e-11 72.0 284 28.5
PGSC0003DMG400024023 Solanum tuberosum HOM05D000307 ORTHO05D018876 1.6e-10 70.5 302 25.5
PGSC0003DMG400038060 Solanum tuberosum HOM05D000307 ORTHO05D000166 2.0e-10 70.1 78 48.7
CAN.G346.9 Capsicum annuum HOM05D013030 ORTHO05D013825 3.5e-10 69.3 200 33.0
Sopen01g033640 Solanum pennellii HOM05D000307 ORTHO05D000166 4.5e-10 68.9 281 27.8
PGSC0003DMG400040157 Solanum tuberosum HOM05D000307 ORTHO05D000166 5.9e-10 68.6 118 37.3
Sopen01g033650 Solanum pennellii HOM05D000307 ORTHO05D000166 7.7e-10 68.2 118 39.8
Sopen01g033630 Solanum pennellii HOM05D000307 ORTHO05D018876 1.3e-09 67.4 278 27.0
Peaxi162Scf01110g00011 Petunia axillaris HOM05D000307 ORTHO05D000166 6.5e-09 65.1 90 38.9
Sopen01g025990 Solanum pennellii HOM05D000307 ORTHO05D018876 1.4e-06 57.4 88 42.0
CAN.G1302.3 Capsicum annuum HOM05D037161 ORTHO05D000166 3.0e-06 56.2 78 41.0
CAN.G226.7 Capsicum annuum HOM05D013030 ORTHO05D013825 3.0e-06 56.2 90 40.0
Sopen01g025980 Solanum pennellii HOM05D000307 ORTHO05D000166 5.2e-06 55.5 118 33.9
CANSAT25G3033 Cannabis sativa HOM05D000307 ORTHO05D000166 6.7e-06 55.1 86 38.4
CAN.G1173.5 Capsicum annuum HOM05D019453 ORTHO05D017740 8.8e-06 54.7 108 35.2
PGSC0003DMG400037461 Solanum tuberosum HOM05D000307 ORTHO05D018876 8.8e-06 54.7 110 35.5
PGSC0003DMG402008541 Solanum tuberosum HOM05D000307 ORTHO05D013825 8.8e-06 54.7 65 49.2


User provided reference genes

Program Settings