Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400001138 Solanum tuberosum HOM05D008892 ORTHO05D010661 4.1e-176 621.3 321 100.0
PGSC0003DMG400041547 Solanum tuberosum HOM05D008892 ORTHO05D010661 9.7e-109 397.5 321 72.0
CAN.G211.14 Capsicum annuum HOM05D000304 ORTHO05D010661 2.4e-51 206.8 318 42.8
PGSC0003DMG400044005 Solanum tuberosum HOM05D008892 ORTHO05D010661 1.2e-42 177.9 120 84.2
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 4.6e-42 176.0 321 35.2
PGSC0003DMG400019084 Solanum tuberosum HOM05D008892 ORTHO05D010661 8.9e-38 161.8 153 57.5
PGSC0003DMG400006732 Solanum tuberosum HOM05D008892 ORTHO05D013316 6.4e-36 155.6 170 53.5
CAN.G637.59 Capsicum annuum HOM05D008892 ORTHO05D010661 8.1e-31 138.7 133 59.4
CAN.G199.34 Capsicum annuum HOM05D008892 ORTHO05D010661 2.0e-29 134.0 107 71.0
COL.COLO4_19832 Corchorus olitorius HOM05D015286 ORTHO05D000669 2.0e-29 134.0 274 33.6
PGSC0003DMG400034893 Solanum tuberosum HOM05D008892 ORTHO05D010661 2.0e-29 134.0 100 73.0
PGSC0003DMG400031892 Solanum tuberosum HOM05D008892 ORTHO05D010661 9.9e-29 131.7 127 61.4
PGSC0003DMG400002416 Solanum tuberosum HOM05D008892 ORTHO05D010661 2.9e-28 130.2 101 69.3
COL.COLO4_29630 Corchorus olitorius HOM05D015286 ORTHO05D010661 4.9e-28 129.4 278 33.1
CAN.G59.16 Capsicum annuum HOM05D008892 ORTHO05D010661 4.2e-27 126.3 126 54.8
Solyc01g057350.1 Solanum lycopersicum HOM05D008892 ORTHO05D010661 6.0e-26 122.5 114 57.0
Solyc05g041177.1 Solanum lycopersicum HOM05D008892 ORTHO05D010661 1.3e-25 121.3 115 55.7
CAN.G818.3 Capsicum annuum HOM05D008892 ORTHO05D010661 1.3e-23 114.8 77 76.6
PGSC0003DMG400041635 Solanum tuberosum HOM05D008892 ORTHO05D010661 6.2e-23 112.5 83 69.9
COL.COLO4_34366 Corchorus olitorius HOM05D015286 ORTHO05D010661 1.1e-22 111.7 301 33.6
CAN.G980.9 Capsicum annuum HOM05D008892 ORTHO05D010661 1.4e-22 111.3 77 76.6
CAN.G782.25 Capsicum annuum HOM05D008892 ORTHO05D010661 1.8e-22 110.9 76 76.3
PGSC0003DMG400044526 Solanum tuberosum HOM05D008892 ORTHO05D010661 2.4e-22 110.5 83 69.9
CAN.G48.8 Capsicum annuum HOM05D008892 ORTHO05D010661 3.1e-22 110.2 77 74.0
CAN.G99.6 Capsicum annuum HOM05D008892 ORTHO05D010661 6.9e-22 109.0 77 72.7
CAN.G22.22 Capsicum annuum HOM05D008892 ORTHO05D010661 9.0e-22 108.6 86 70.9
CAN.G524.2 Capsicum annuum HOM05D008892 ORTHO05D010661 1.5e-21 107.8 74 75.7
Sopen02g006500 Solanum pennellii HOM05D008892 ORTHO05D010661 1.7e-20 104.4 79 69.6
COL.COLO4_16289 Corchorus olitorius HOM05D059948 ORTHO05D010661 2.2e-20 104.0 281 29.5
CAN.G307.17 Capsicum annuum HOM05D008892 ORTHO05D010661 3.8e-20 103.2 77 74.0
CAN.G475.41 Capsicum annuum HOM05D008892 ORTHO05D010661 4.9e-20 102.8 81 66.7
PGSC0003DMG400042930 Solanum tuberosum HOM05D008892 ORTHO05D010661 1.1e-19 101.7 86 66.3
Zm00001eb308100 Zea mays HOM05D009009 ORTHO05D010828 1.9e-19 100.9 156 37.2
SHI17046 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-19 100.1 246 30.9
PGSC0003DMG400002417 Solanum tuberosum HOM05D008892 ORTHO05D010661 2.1e-18 97.4 76 65.8
SGA_v2.0_scaffold752G53551 Striga asiatica HOM05D025956 ORTHO05D000669 2.1e-18 97.4 250 28.0
Zm00001eb019990 Zea mays HOM05D009009 ORTHO05D010828 6.0e-18 95.9 305 26.9
Oeu006554.1 Olea europaea HOM05D017951 ORTHO05D020916 3.0e-17 93.6 268 28.0
CAN.G298.17 Capsicum annuum HOM05D008892 ORTHO05D010661 5.1e-17 92.8 70 68.6
Solyc02g022880.1 Solanum lycopersicum HOM05D008892 ORTHO05D010661 1.9e-16 90.9 85 56.5
Dinv09125 Davidia involucrata HOM05D011313 ORTHO05D013316 9.6e-16 88.6 155 31.0
Zm00001eb276390 Zea mays HOM05D009009 ORTHO05D010828 1.3e-15 88.2 328 24.4
Zm00001eb384030 Zea mays HOM05D009009 ORTHO05D016371 3.6e-15 86.7 156 32.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.2e-15 85.9 267 26.6
Solyc03g061610.1 Solanum lycopersicum HOM05D008892 ORTHO05D010661 1.4e-14 84.7 53 79.2
CAN.G5.19 Capsicum annuum HOM05D008892 ORTHO05D010661 1.8e-14 84.3 63 68.3
Os02g0241300 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 1.8e-14 84.3 148 33.8
Zm00001eb176540 Zea mays HOM05D009009 ORTHO05D010828 1.8e-14 84.3 328 24.1
COL.COLO4_33233 Corchorus olitorius HOM05D015286 ORTHO05D010661 1.2e-13 81.6 91 52.7
Dinv05705 Davidia involucrata HOM05D008892 ORTHO05D010661 1.5e-13 81.3 81 48.1
Dinv14679 Davidia involucrata HOM05D011313 ORTHO05D013316 1.5e-13 81.3 258 28.7
Zm00001eb278490 Zea mays HOM05D009009 ORTHO05D010828 2.6e-13 80.5 323 23.8
Os02g0583500 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 7.6e-13 79.0 233 27.9
Os11g0519100 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 7.6e-13 79.0 233 27.9
Dinv05704 Davidia involucrata HOM05D000038 ORTHO05D000143 1.7e-12 77.8 99 43.4
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.7e-12 77.8 199 29.6
Os04g0519100 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 2.9e-12 77.0 180 28.9
Zm00001eb417100 Zea mays HOM05D009009 ORTHO05D010828 3.8e-12 76.6 151 30.5
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-11 75.1 282 25.5
Oeu050582.1 Olea europaea HOM05D017951 ORTHO05D020916 1.4e-11 74.7 255 26.3
Zm00001eb029830 Zea mays HOM05D009296 ORTHO05D010828 1.4e-11 74.7 279 26.2
MBI15_g15098_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.9e-11 74.3 333 24.6
Zm00001eb084650 Zea mays HOM05D009296 ORTHO05D010828 3.2e-11 73.6 158 31.6
CSS0039716 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 4.2e-11 73.2 157 33.1
Zm00001eb006240 Zea mays HOM05D009296 ORTHO05D010828 4.2e-11 73.2 153 32.0
Zm00001eb176390 Zea mays HOM05D009296 ORTHO05D010828 5.4e-11 72.8 158 31.6
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.1e-11 72.4 197 27.9
MBI18_g17722_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.1e-11 72.4 303 24.1
SHI36013 Sapria himalayana HOM05D000107 ORTHO05D000062 7.1e-11 72.4 269 24.9
CSS0005105 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 9.3e-11 72.0 157 33.1
CSS0037888 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 9.3e-11 72.0 157 33.1
MBI09_g30141_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.3e-11 72.0 276 23.9
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.3e-11 72.0 197 27.4
Dinv04254 Davidia involucrata HOM05D008892 ORTHO05D010661 1.2e-10 71.6 101 38.6
Dinv09482 Davidia involucrata HOM05D008892 ORTHO05D010661 1.2e-10 71.6 101 38.6
MBI16_g34343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.1e-10 70.9 197 27.4
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 2.1e-10 70.9 309 24.3
Dinv01746 Davidia involucrata HOM05D005167 ORTHO05D006312 3.5e-10 70.1 92 39.1
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.5e-10 70.1 199 29.1
Os04g0228600 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 3.5e-10 70.1 143 28.7
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 3.5e-10 70.1 301 26.9
Zm00001eb385530 Zea mays HOM05D009296 ORTHO05D010828 4.6e-10 69.7 154 31.2
Zm00001eb423000 Zea mays HOM05D009296 ORTHO05D010828 4.6e-10 69.7 203 29.1
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.0e-10 69.3 206 28.2
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 7.9e-10 68.9 285 26.3
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 1.0e-09 68.6 285 26.3
Atru.chr9.7 Acer truncatum HOM05D008705 ORTHO05D000669 1.3e-09 68.2 200 29.0
Peaxi162Scf00131g00120 Petunia axillaris HOM05D003120 ORTHO05D003568 1.3e-09 68.2 276 24.3
SHI42844 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-09 68.2 185 30.3
Sopen07g013100 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-09 67.8 56 57.1
Zm00001eb354130 Zea mays HOM05D009296 ORTHO05D010828 2.3e-09 67.4 202 28.7
CiPaw.10G065700 Carya illinoinensis HOM05D000791 ORTHO05D000669 3.0e-09 67.0 272 22.4
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.9e-09 66.6 341 23.5
FAN09G3738 Fragaria x ananassa HOM05D008705 ORTHO05D001863 8.7e-09 65.5 265 27.2
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.7e-09 65.5 282 23.4
Solyc05g032670.3 Solanum lycopersicum HOM05D008892 ORTHO05D010661 8.7e-09 65.5 48 72.9
CSS0026970 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.1e-08 65.1 178 30.3
Rhsim03G0202300 Rhododendron simsii HOM05D017301 ORTHO05D000669 1.1e-08 65.1 348 22.7
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-08 64.7 197 27.9
Dinv02161 Davidia involucrata HOM05D011313 ORTHO05D013316 1.9e-08 64.3 83 36.1
Dinv24107 Davidia involucrata HOM05D000016 ORTHO05D000433 1.9e-08 64.3 145 26.2
MBI18_g19501_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.5e-08 63.9 175 28.0
Os06g0240600 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 2.5e-08 63.9 159 27.7
PGSC0003DMG400031911 Solanum tuberosum HOM05D008892 ORTHO05D010661 2.5e-08 63.9 48 66.7
Dinv06183 Davidia involucrata HOM05D011313 ORTHO05D013316 3.3e-08 63.5 106 32.1
Dinv12412 Davidia involucrata HOM05D010418 ORTHO05D000669 3.3e-08 63.5 147 29.9
Dinv25015 Davidia involucrata HOM05D011313 ORTHO05D013316 5.6e-08 62.8 83 34.9
Dinv09087 Davidia involucrata HOM05D011313 ORTHO05D013316 7.4e-08 62.4 84 33.3
MBI03_g12026_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.4e-08 62.4 158 23.4
Dinv03141 Davidia involucrata HOM05D011313 ORTHO05D013316 9.6e-08 62.0 83 33.7
MBI05_g43492_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.6e-08 62.0 144 26.4
Dinv10745 Davidia involucrata HOM05D011313 ORTHO05D013316 2.1e-07 60.8 83 33.7
Dinv16796 Davidia involucrata HOM05D008892 ORTHO05D010661 2.1e-07 60.8 70 40.0
Nitab4.5_0002512g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.8e-07 60.5 265 23.8
MBI11_g23002_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.8e-07 59.7 198 26.8
MBI09_g39161_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.2e-07 59.3 112 27.7
CSS0007712 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 8.1e-07 58.9 393 22.4
Dinv16095 Davidia involucrata HOM05D000791 ORTHO05D000669 8.1e-07 58.9 191 27.7
Dinv01238 Davidia involucrata HOM05D011313 ORTHO05D013316 2.4e-06 57.4 82 32.9
Dinv32706 Davidia involucrata HOM05D002647 ORTHO05D013316 2.4e-06 57.4 128 27.3
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.4e-06 57.4 290 23.8
SHI42406 Sapria himalayana HOM05D000107 ORTHO05D010661 2.4e-06 57.4 88 37.5
CSS0000180 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 3.1e-06 57.0 383 23.0
COL.COLO4_35859 Corchorus olitorius HOM05D015286 ORTHO05D010661 3.1e-06 57.0 112 34.8
Dinv24767 Davidia involucrata HOM05D000791 ORTHO05D000669 4.0e-06 56.6 163 28.8
Dinv31455 Davidia involucrata HOM05D000791 ORTHO05D000669 4.0e-06 56.6 163 28.8
MBI12_g38023_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.0e-06 56.6 144 29.9


User provided reference genes

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