Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 3.5e-92 341.7 177 100.0
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.8e-88 329.3 177 95.5
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 4.0e-88 328.2 177 95.5
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 4.3e-58 228.4 124 89.5
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 5.2e-56 221.5 122 89.3
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 3.9e-51 205.3 137 76.6
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 2.2e-46 189.5 109 85.3
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 4.6e-44 181.8 157 61.8
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 2.3e-43 179.5 150 63.3
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 3.9e-43 178.7 161 57.1
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 7.3e-42 174.5 148 61.5
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 1.6e-41 173.3 154 61.0
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 2.1e-41 172.9 161 60.2
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 3.6e-41 172.2 146 63.7
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 6.2e-41 171.4 147 61.9
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 8.1e-41 171.0 146 63.0
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 1.8e-40 169.9 152 61.2
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.4e-40 169.5 171 55.6
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 5.3e-40 168.3 164 56.7
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 9.0e-40 167.5 152 61.8
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.2e-39 167.2 161 57.8
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.5e-39 166.8 171 56.7
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 2.0e-39 166.4 158 58.9
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 2.0e-39 166.4 160 57.5
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 3.4e-39 165.6 153 58.8
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 3.4e-39 165.6 176 54.0
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 4.4e-39 165.2 152 59.2
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 5.8e-39 164.9 150 60.7
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 5.8e-39 164.9 170 57.6
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 5.8e-39 164.9 146 61.0
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 7.6e-39 164.5 151 58.9
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 1.3e-38 163.7 156 59.6
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 1.7e-38 163.3 149 59.1
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 2.2e-38 162.9 146 61.6
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 2.2e-38 162.9 163 55.2
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 2.2e-38 162.9 152 59.9
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 4.9e-38 161.8 146 58.2
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 4.9e-38 161.8 147 59.2
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 4.9e-38 161.8 143 54.5
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 6.4e-38 161.4 149 60.4
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 8.4e-38 161.0 164 56.7
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 1.1e-37 160.6 169 52.7
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 1.1e-37 160.6 164 54.9
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.4e-37 160.2 147 58.5
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.4e-37 160.2 153 60.1
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.9e-37 159.8 138 63.0
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 2.4e-37 159.5 146 60.3
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 3.2e-37 159.1 146 58.9
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 7.1e-37 157.9 146 56.2
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 1.6e-36 156.8 161 54.7
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 2.7e-36 156.0 161 49.1
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 2.7e-36 156.0 160 53.8
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 3.5e-36 155.6 165 56.4
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.9e-36 154.5 158 55.7
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 1.0e-35 154.1 173 53.2
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 1.3e-35 153.7 149 58.4
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 1.3e-35 153.7 146 54.8
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 1.7e-35 153.3 158 51.3
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 1.7e-35 153.3 147 59.9
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.7e-35 153.3 159 55.3
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 1.7e-35 153.3 159 55.3
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 3.0e-35 152.5 151 57.6
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 3.9e-35 152.1 136 55.1
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 3.9e-35 152.1 136 55.1
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 3.9e-35 152.1 136 55.1
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.9e-35 152.1 159 54.1
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 3.9e-35 152.1 136 61.0
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 5.1e-35 151.8 153 52.9
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 6.6e-35 151.4 158 54.4
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 6.6e-35 151.4 146 56.2
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 8.7e-35 151.0 147 58.5
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.9e-34 149.8 158 53.8
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 2.5e-34 149.4 153 49.7
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.5e-34 149.4 153 50.3
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 3.3e-34 149.1 142 57.7
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 4.3e-34 148.7 136 52.9
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 4.3e-34 148.7 127 63.0
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 7.3e-34 147.9 137 54.7
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 1.3e-33 147.1 132 60.6
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.6e-33 146.7 168 45.2
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.6e-33 146.7 147 51.7
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 2.1e-33 146.4 136 53.7
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 2.1e-33 146.4 136 53.7
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.1e-33 146.4 153 50.3
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 4.8e-33 145.2 150 56.0
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 4.8e-33 145.2 142 54.9
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 6.2e-33 144.8 153 54.2
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 6.2e-33 144.8 139 51.8
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 6.2e-33 144.8 139 51.8
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 8.1e-33 144.4 153 49.0
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 3.1e-32 142.5 147 55.8
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 5.3e-32 141.7 128 59.4
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 6.9e-32 141.4 166 48.8
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 6.9e-32 141.4 147 55.8
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 3.4e-31 139.0 156 50.6
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 7.6e-31 137.9 159 50.3
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 9.9e-31 137.5 146 53.4
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 1.1e-29 134.0 115 60.9
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 2.4e-29 132.9 163 49.7
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 1.2e-28 130.6 145 49.7
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 2.7e-28 129.4 146 46.6
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 3.0e-27 125.9 155 48.4
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 3.9e-27 125.6 128 57.0
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.5e-26 123.6 173 49.1
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 4.3e-26 122.1 135 48.1
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.4e-23 112.5 105 50.5
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 9.0e-16 87.8 66 65.2
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.5e-15 87.0 75 54.7
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 6.1e-12 75.1 102 38.2
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 6.3e-09 65.1 123 34.1
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 8.2e-09 64.7 128 33.6
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 3.4e-07 59.3 71 47.9


User provided reference genes

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