Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 4.1e-156 554.7 280 100.0
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 4.6e-139 498.0 273 93.0
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 2.1e-136 489.2 273 91.9
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 8.4e-125 450.7 272 84.6
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 6.2e-120 434.5 280 78.9
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.8e-119 433.0 280 80.4
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 3.2e-116 422.2 280 79.3
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 5.5e-84 315.1 279 60.2
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 2.3e-82 309.7 193 80.3
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.5e-81 307.0 274 59.5
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 1.3e-80 303.9 275 59.6
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 1.3e-80 303.9 274 58.0
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 3.7e-80 302.4 212 67.9
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 1.7e-77 293.5 252 60.7
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 3.8e-77 292.4 274 56.9
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 3.2e-76 289.3 242 60.3
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 5.5e-76 288.5 248 60.9
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 9.4e-76 287.7 221 62.9
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 1.6e-75 287.0 261 57.5
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.6e-75 287.0 217 65.4
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 2.7e-75 286.2 274 55.5
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 2.7e-75 286.2 239 61.1
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 3.6e-75 285.8 274 55.5
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 3.6e-75 285.8 230 63.5
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 3.6e-75 285.8 212 64.2
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 8.0e-75 284.6 205 65.4
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.4e-74 283.9 239 60.7
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.8e-74 283.5 282 54.3
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 3.9e-74 282.3 243 59.3
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 6.7e-74 281.6 239 60.7
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 6.7e-74 281.6 234 62.4
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 4.4e-73 278.9 211 64.0
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 9.7e-73 277.7 273 54.2
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 9.7e-73 277.7 234 61.1
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 1.7e-72 276.9 205 64.9
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 2.8e-72 276.2 213 64.3
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 8.2e-72 274.6 206 63.6
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 1.1e-71 274.2 221 60.2
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 4.1e-71 272.3 211 64.0
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 4.1e-71 272.3 275 57.1
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 4.1e-71 272.3 214 63.1
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 4.1e-71 272.3 188 70.2
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 2.0e-70 270.0 276 53.6
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 2.0e-70 270.0 277 53.4
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 3.5e-70 269.2 216 60.6
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 1.0e-69 267.7 222 59.9
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.3e-69 267.3 280 53.6
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 1.7e-69 266.9 207 62.3
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 2.2e-69 266.5 267 54.7
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 2.9e-69 266.2 253 54.5
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 3.8e-69 265.8 221 58.4
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 3.8e-69 265.8 261 55.2
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 5.0e-69 265.4 262 53.1
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 8.5e-69 264.6 242 53.3
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 8.5e-69 264.6 219 58.4
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 1.5e-68 263.8 200 64.0
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 1.9e-68 263.5 200 64.0
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.9e-68 263.5 200 64.0
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 1.9e-68 263.5 213 59.6
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 3.2e-68 262.7 206 62.6
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 7.2e-68 261.5 273 52.4
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 1.2e-67 260.8 212 60.4
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.2e-67 260.8 200 63.5
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.7e-67 259.6 200 63.0
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 3.6e-67 259.2 212 60.8
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 4.7e-67 258.8 280 52.9
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 1.8e-66 256.9 279 51.6
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.8e-66 256.9 243 53.9
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 5.2e-66 255.4 212 57.5
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 2.0e-65 253.4 204 59.3
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 7.5e-65 251.5 204 58.8
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 1.3e-64 250.8 218 55.5
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 1.7e-64 250.4 274 50.7
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 8.3e-64 248.1 268 51.1
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 1.4e-63 247.3 201 58.7
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 1.4e-63 247.3 201 58.7
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 1.4e-63 247.3 201 58.7
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 1.8e-63 246.9 274 50.7
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 2.4e-63 246.5 276 50.0
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 2.4e-63 246.5 273 50.2
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 1.6e-62 243.8 274 51.1
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 2.7e-62 243.0 206 58.3
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 3.8e-61 239.2 206 58.7
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 3.8e-61 239.2 207 56.0
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.6e-59 233.8 206 56.8
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 1.0e-58 231.1 225 52.9
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 1.8e-58 230.3 225 52.0
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 4.0e-58 229.2 192 57.8
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 6.8e-58 228.4 220 51.8
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.5e-57 227.3 270 46.7
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 3.4e-57 226.1 270 45.9
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 5.7e-57 225.3 272 46.3
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 9.8e-57 224.6 266 47.7
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.9e-53 213.0 268 47.0
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 3.8e-53 212.6 193 53.9
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 5.0e-53 212.2 228 49.1
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 1.0e-50 204.5 220 48.6
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 1.7e-48 197.2 209 52.2
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 5.4e-47 192.2 158 61.4
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 4.6e-46 189.1 243 43.2
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.3e-45 187.6 230 43.5
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 4.3e-44 182.6 141 63.8
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 7.5e-41 171.8 151 55.0
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 1.1e-31 141.4 198 36.4
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.9e-31 140.6 141 50.4
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.7e-29 134.0 183 39.3
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 4.3e-20 102.8 188 36.2
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 2.8e-19 100.1 75 62.7
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 1.2e-17 94.7 177 30.5
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 1.3e-16 91.3 259 29.0
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.1e-15 88.2 73 54.8
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.4e-15 87.8 63 65.1
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 6.0e-14 82.4 122 37.7
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 3.9e-13 79.7 146 30.8
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 6.2e-11 72.4 69 52.2
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 9.0e-10 68.6 69 49.3


User provided reference genes

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