Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 8.6e-254 879.8 430 100.0
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 2.7e-239 831.6 430 95.1
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 7.8e-223 776.9 428 86.4
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 1.1e-216 756.5 431 84.0
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 3.9e-214 748.0 420 84.5
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 4.3e-213 744.6 420 84.3
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 3.3e-197 691.8 417 77.7
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 2.8e-196 688.7 430 76.5
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 4.8e-196 688.0 430 75.3
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 1.2e-194 683.3 414 76.6
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 1.2e-194 683.3 415 77.3
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 1.3e-193 679.9 416 76.0
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 1.3e-193 679.9 431 74.2
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 5.0e-193 677.9 426 76.3
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 1.9e-192 676.0 430 74.7
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 2.5e-192 675.6 430 74.9
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 9.4e-192 673.7 434 75.1
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 2.7e-191 672.2 430 73.7
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 4.6e-191 671.4 409 76.5
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 6.1e-191 671.0 434 74.7
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 1.8e-190 669.5 438 71.9
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 5.1e-190 667.9 431 74.2
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 1.1e-189 666.8 433 74.4
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 2.5e-189 665.6 415 75.4
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 3.3e-189 665.2 430 72.1
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 7.4e-189 664.1 435 72.6
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 9.7e-189 663.7 426 74.2
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.2e-188 662.5 435 72.4
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 3.7e-188 661.8 435 72.4
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 1.1e-187 660.2 430 71.6
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 2.4e-187 659.1 431 72.6
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 4.1e-187 658.3 435 72.9
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 4.1e-187 658.3 432 72.9
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 5.3e-187 657.9 423 72.1
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 6.9e-187 657.5 433 74.6
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 1.5e-186 656.4 423 72.3
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 2.6e-186 655.6 425 74.4
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 3.8e-185 651.7 420 72.9
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 1.9e-184 649.4 418 73.9
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 1.9e-184 649.4 430 70.5
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 3.2e-184 648.7 430 71.9
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 3.9e-182 641.7 423 69.7
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 2.0e-181 639.4 440 70.9
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 7.4e-181 637.5 434 69.4
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 1.3e-180 636.7 428 73.1
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 2.8e-180 635.6 430 71.2
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 3.7e-180 635.2 428 72.0
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 4.8e-180 634.8 428 72.2
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 1.4e-179 633.3 434 70.5
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 1.8e-179 632.9 430 71.4
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 1.8e-179 632.9 448 69.2
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 5.3e-179 631.3 426 71.1
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 1.2e-178 630.2 426 70.9
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 1.5e-178 629.8 428 71.7
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 1.5e-178 629.8 426 71.1
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 1.5e-178 629.8 427 69.1
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 3.5e-178 628.6 430 71.4
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 3.5e-178 628.6 413 71.7
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 4.5e-178 628.2 413 72.4
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 7.7e-178 627.5 428 70.1
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 1.3e-177 626.7 424 71.0
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 3.8e-177 625.2 422 71.3
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 5.0e-177 624.8 421 71.3
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 6.5e-177 624.4 439 69.0
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 8.5e-177 624.0 428 71.5
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 1.1e-176 623.6 415 72.3
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 1.4e-176 623.2 433 70.0
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.4e-176 623.2 409 69.2
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 9.4e-176 620.5 433 69.3
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 1.2e-175 620.2 422 70.6
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.7e-175 619.0 421 68.4
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 6.1e-175 617.8 436 67.7
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 1.8e-174 616.3 415 71.6
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 1.8e-174 616.3 415 71.6
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 6.7e-174 614.4 413 69.7
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 4.4e-173 611.7 432 68.3
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 9.7e-173 610.5 419 68.5
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 1.3e-172 610.1 459 66.7
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 2.2e-172 609.4 428 66.8
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 8.2e-172 607.4 426 68.5
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.1e-171 607.1 419 68.0
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 7.0e-171 604.4 432 67.8
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 9.1e-171 604.0 435 67.4
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.2e-170 603.6 421 69.4
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 1.2e-170 603.6 424 67.7
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 1.6e-170 603.2 412 70.1
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 1.6e-170 603.2 427 67.0
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 7.7e-170 600.9 427 68.4
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 7.7e-170 600.9 427 67.0
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.1e-168 597.0 431 67.3
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 1.9e-168 596.3 417 68.6
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 6.7e-166 587.8 426 65.7
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 6.7e-166 587.8 426 65.7
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 3.3e-165 585.5 427 64.6
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 2.2e-164 582.8 412 67.0
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 1.1e-163 580.5 427 64.4
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 1.8e-163 579.7 434 63.6
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 7.0e-163 577.8 412 66.5
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 5.0e-161 571.6 404 66.6
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 6.5e-161 571.2 423 64.5
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 3.2e-160 568.9 429 64.3
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 4.2e-160 568.5 430 65.6
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.3e-158 562.8 433 62.1
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 5.2e-158 561.6 436 62.8
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 8.8e-158 560.8 415 66.3
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 8.9e-150 534.3 437 60.2
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.5e-149 533.5 419 60.4
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 2.0e-149 533.1 413 61.3
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 3.4e-149 532.3 427 60.0
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 1.7e-148 530.0 432 58.6
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 3.7e-148 528.9 435 61.6
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 2.4e-147 526.2 435 57.2
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 4.1e-147 525.4 424 60.4
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 1.2e-146 523.9 356 71.3
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 3.3e-144 515.8 436 55.5
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 9.5e-144 514.2 447 57.0
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 9.5e-136 487.6 422 55.0
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 7.5e-133 478.0 395 57.0
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 7.5e-125 451.4 407 57.0
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 2.4e-118 429.9 309 67.3
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 4.0e-118 429.1 432 49.3
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 9.2e-115 417.9 296 65.5
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 3.5e-114 416.0 412 50.2
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 2.8e-111 406.4 430 51.2
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 6.9e-110 401.7 419 46.3
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 6.9e-110 401.7 430 50.9
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 7.1e-107 391.7 414 45.2
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 4.6e-106 389.0 269 67.3
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.9e-100 369.0 346 51.2
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 8.4e-92 341.7 411 43.1
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 9.3e-91 338.2 263 65.4
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 2.7e-82 310.1 227 66.5
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 1.0e-81 308.1 240 63.8
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.6e-79 300.8 291 50.2
Lj3C845T9 Lonicera japonica HOM05D004203 ORTHO05D004830 2.0e-64 250.8 155 76.1
Solyc11g006360.1 Solanum lycopersicum HOM05D004203 ORTHO05D004830 1.7e-60 237.7 113 95.6
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 2.4e-54 217.2 160 65.0
Sc08g0004150 Simmondsia chinensis HOM05D004203 ORTHO05D004830 9.4e-51 205.3 137 67.2
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.2e-48 198.4 310 38.1
Sc08g0004170 Simmondsia chinensis HOM05D004203 ORTHO05D004830 8.3e-47 192.2 130 66.2
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 1.7e-44 184.5 145 63.4
FAN12G3670 Fragaria x ananassa HOM05D004203 ORTHO05D004830 1.7e-39 167.9 159 57.2
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 2.2e-39 167.5 126 64.3
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 1.9e-35 154.5 406 27.3
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.2e-35 153.3 211 44.5
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 1.0e-33 148.7 158 52.5
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 9.2e-22 109.0 80 65.0
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 6.6e-20 102.8 79 64.6
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 2.5e-19 100.9 102 52.0
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 7.3e-19 99.4 77 63.6
BcaB06g27492 Brassica carinata HOM05D004203 ORTHO05D004830 2.8e-18 97.4 92 55.4
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 6.2e-18 96.3 72 68.1
Sc08g0004140 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.4e-17 95.1 82 54.9
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 3.4e-16 90.5 111 42.3
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.9e-15 87.4 164 31.7
GSVIVG01034364001 Vitis vinifera HOM05D004203 ORTHO05D004830 4.1e-14 83.6 63 63.5
BcaB06g27494 Brassica carinata HOM05D004203 ORTHO05D004830 7.1e-14 82.8 74 56.8
COL.COLO4_33125 Corchorus olitorius HOM05D004203 ORTHO05D004830 5.1e-12 76.6 57 61.4
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 8.6e-12 75.9 61 63.9
BcaC07g38231 Brassica carinata HOM05D004203 ORTHO05D004830 3.6e-10 70.5 58 60.3
BcaB06g26577 Brassica carinata HOM05D004203 ORTHO05D004830 6.2e-10 69.7 55 61.8
MCO08G255 Micromonas commoda HOM05D004203 ORTHO05D004830 6.8e-09 66.2 106 34.0
Pp3c14_4390 Physcomitrium patens HOM05D004203 ORTHO05D004830 3.7e-07 60.5 72 36.1
A05p19690 Brassica napus HOM05D004203 ORTHO05D004830 1.1e-06 58.9 51 54.9
SEGI_22616 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.1e-06 58.9 83 34.9
BcaB05g24942 Brassica carinata HOM05D004203 ORTHO05D004830 4.1e-06 57.0 42 54.8
SEGI_15796 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 9.2e-06 55.8 50 56.0


User provided reference genes

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