Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000847 Solanum tuberosum HOM05D005646 ORTHO05D006828 8.0e-94 347.1 172 100.0
Solyc01g068470.4 Solanum lycopersicum HOM05D005646 ORTHO05D006828 7.9e-49 197.6 102 95.1
CAN.G1571.4 Capsicum annuum HOM05D005646 ORTHO05D006828 3.0e-48 195.7 134 75.4
Nitab4.5_0000316g0120 Nicotiana tabacum HOM05D005646 ORTHO05D006828 1.4e-45 186.8 134 70.9
Peaxi162Scf00309g00328 Petunia axillaris HOM05D005646 ORTHO05D006828 3.1e-45 185.7 102 89.2
Sopen01g030430 Solanum pennellii HOM05D005646 ORTHO05D006828 3.1e-45 185.7 126 77.8
Eucgr.J01194 Eucalyptus grandis HOM05D005646 ORTHO05D006828 2.7e-41 172.6 129 66.7
CSS0034883 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 3.5e-41 172.2 134 66.4
CiPaw.13G011000 Carya illinoinensis HOM05D005646 ORTHO05D006828 3.5e-41 172.2 140 65.7
MSTRG.20533 Avicennia marina HOM05D005646 ORTHO05D006828 4.6e-41 171.8 102 82.4
Hma1.2p1_0902F.1_g234850 Hydrangea macrophylla HOM05D005646 ORTHO05D006828 7.9e-41 171.0 130 66.9
FvH4_5g29000 Fragaria vesca HOM05D005646 ORTHO05D006828 1.8e-40 169.9 102 78.4
FAN08G2254 Fragaria x ananassa HOM05D005646 ORTHO05D006828 1.8e-40 169.9 102 78.4
FAN18G3275 Fragaria x ananassa HOM05D005646 ORTHO05D006828 1.8e-40 169.9 102 78.4
Ciclev10031582m.g Citrus clementina HOM05D005646 ORTHO05D006828 3.9e-40 168.7 134 64.9
Nn7g36491 Nelumbo nucifera HOM05D005646 ORTHO05D006828 3.9e-40 168.7 111 73.9
CDE08G1053 Ceratophyllum demersum HOM05D005646 ORTHO05D006828 5.1e-40 168.3 102 77.5
Haze_03084 Corylus avellana HOM05D005646 ORTHO05D006828 5.1e-40 168.3 102 78.4
PGR142G3067 Punica granatum HOM05D005646 ORTHO05D006828 6.7e-40 167.9 131 61.8
CSS0050243 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 8.7e-40 167.5 134 64.9
FAN13G1025 Fragaria x ananassa HOM05D005646 ORTHO05D006828 8.7e-40 167.5 102 76.5
Medtr4g071010 Medicago truncatula HOM05D005646 ORTHO05D006828 1.1e-39 167.2 103 74.8
Dinv32048 Davidia involucrata HOM05D005646 ORTHO05D006828 1.9e-39 166.4 129 64.3
QL04p013757 Quercus lobata HOM05D005646 ORTHO05D006828 1.9e-39 166.4 134 62.7
SalBow5G2661 Salvia bowleyana HOM05D005646 ORTHO05D006828 4.3e-39 165.2 102 77.5
AUR62032557 Chenopodium quinoa HOM05D005646 ORTHO05D006828 5.6e-39 164.9 135 60.0
SalBow5G2332 Salvia bowleyana HOM05D005646 ORTHO05D006828 9.6e-39 164.1 129 64.3
GSVIVG01000839001 Vitis vinifera HOM05D005646 ORTHO05D006828 1.3e-38 163.7 130 62.3
Actinidia19445 Actinidia chinensis HOM05D005646 ORTHO05D006828 2.1e-38 162.9 111 71.2
Glyma.11G113800 Glycine max HOM05D005646 ORTHO05D006828 2.1e-38 162.9 133 61.7
Lj9A646T48 Lonicera japonica HOM05D005646 ORTHO05D006828 2.8e-38 162.5 129 62.8
arahy.Tifrunner.gnm1.ann1.2P0PPD Arachis hypogaea HOM05D005646 ORTHO05D006828 4.8e-38 161.8 102 74.5
arahy.Tifrunner.gnm1.ann1.HJ7TPY Arachis hypogaea HOM05D005646 ORTHO05D006828 4.8e-38 161.8 102 74.5
AUR62031673 Chenopodium quinoa HOM05D005646 ORTHO05D006828 4.8e-38 161.8 135 60.0
Migut.B01206 Erythranthe guttata HOM05D005646 ORTHO05D006828 4.8e-38 161.8 103 72.8
Ah.10g030810 Amaranthus hybridus HOM05D005646 ORTHO05D006828 6.2e-38 161.4 102 74.5
COL.COLO4_33459 Corchorus olitorius HOM05D005646 ORTHO05D006828 6.2e-38 161.4 102 72.5
Manes.11G002900 Manihot esculenta HOM05D005646 ORTHO05D006828 6.2e-38 161.4 130 61.5
RcHm_v2.0_Chr7g0221681 Rosa chinensis HOM05D005646 ORTHO05D006828 6.2e-38 161.4 102 73.5
EL10Ac2g02850 Beta vulgaris HOM05D005646 ORTHO05D006828 8.2e-38 161.0 135 60.0
Atru.chr11.2464 Acer truncatum HOM05D005646 ORTHO05D006828 1.1e-37 160.6 133 58.6
MBI19_g40603_MAGBIO Magnolia biondii HOM05D005646 ORTHO05D006828 1.1e-37 160.6 111 70.3
MD02G1293900 Malus domestica HOM05D005646 ORTHO05D006828 1.1e-37 160.6 136 62.5
Thecc.10G006200 Theobroma cacao HOM05D005646 ORTHO05D006828 1.1e-37 160.6 136 59.6
Cc02_g29140 Coffea canephora HOM05D005646 ORTHO05D006828 1.4e-37 160.2 111 68.5
Aqoxy1G00222 Aquilegia oxysepala HOM05D005646 ORTHO05D006828 2.4e-37 159.5 132 60.6
Sc17g0003830 Simmondsia chinensis HOM05D005646 ORTHO05D006828 2.4e-37 159.5 103 69.9
ECA234G1046 Erigeron canadensis HOM05D005646 ORTHO05D006828 3.1e-37 159.1 132 58.3
THA.LOC104824183 Tarenaya hassleriana HOM05D005646 ORTHO05D006828 4.0e-37 158.7 128 60.9
DCAR_022352 Daucus carota HOM05D005646 ORTHO05D006828 5.3e-37 158.3 130 62.3
VMungo1127G2196 Vigna mungo HOM05D005646 ORTHO05D006828 5.3e-37 158.3 102 73.5
SGA_v2.0_scaffold249G44948 Striga asiatica HOM05D005646 ORTHO05D006828 6.9e-37 157.9 104 71.2
Potri.001G024200 Populus trichocarpa HOM05D005646 ORTHO05D006828 1.5e-36 156.8 130 57.7
ATR0217G018 Amborella trichopoda HOM05D005646 ORTHO05D006828 2.0e-36 156.4 135 60.0
Gohir.D10G253200 Gossypium hirsutum HOM05D005646 ORTHO05D006828 2.0e-36 156.4 135 56.3
Aa31LG5G20900 Aethionema arabicum HOM05D005646 ORTHO05D006828 2.6e-36 156.0 110 67.3
Lsat_1_v5_gn_4_30541 Lactuca sativa HOM05D005646 ORTHO05D006828 2.6e-36 156.0 102 69.6
CANSAT54G2531 Cannabis sativa HOM05D005646 ORTHO05D006828 3.4e-36 155.6 111 65.8
Nitab4.5_0013777g0020 Nicotiana tabacum HOM05D005646 ORTHO05D006828 3.4e-36 155.6 120 70.0
Sabra01G0018200 Salix brachista HOM05D005646 ORTHO05D000112 3.4e-36 155.6 130 57.7
CARHR133490 Cardamine hirsuta HOM05D005646 ORTHO05D006828 4.5e-36 155.2 111 65.8
ClCG01G007660 Citrullus lanatus HOM05D005646 ORTHO05D006828 4.5e-36 155.2 131 60.3
Lj3g0019487 Lotus japonicus HOM05D005646 ORTHO05D006828 4.5e-36 155.2 102 72.5
Rhsim07G0062900 Rhododendron simsii HOM05D005646 ORTHO05D006828 4.5e-36 155.2 132 62.1
Lalb_Chr03g0025471 Lupinus albus HOM05D005646 ORTHO05D006828 7.6e-36 154.5 135 57.8
MELO3C005130.2 Cucumis melo HOM05D005646 ORTHO05D006828 1.0e-35 154.1 128 60.9
HanXRQChr16g0525351 Helianthus annuus HOM05D005646 ORTHO05D006828 1.3e-35 153.7 151 53.0
Gohir.A10G241000 Gossypium hirsutum HOM05D005646 ORTHO05D006828 1.7e-35 153.3 135 56.3
Gorai.011G293500 Gossypium raimondii HOM05D005646 ORTHO05D006828 1.7e-35 153.3 135 55.6
Hund13332 Selenicereus undatus HOM05D005646 ORTHO05D006828 1.7e-35 153.3 135 56.3
Carub.0004s2080 Capsella rubella HOM05D005646 ORTHO05D006828 2.2e-35 152.9 111 64.0
Duzib128G0351 Durio zibethinus HOM05D005646 ORTHO05D006828 2.2e-35 152.9 130 58.5
Thhalv10016593m.g Eutrema salsugineum HOM05D005646 ORTHO05D006828 2.2e-35 152.9 111 64.0
Sp4g21170 Schrenkiella parvula HOM05D005646 ORTHO05D006828 2.2e-35 152.9 111 64.0
AL4G36080 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 2.9e-35 152.5 111 63.1
CsaV3_5G024710 Cucumis sativus L. HOM05D005646 ORTHO05D006828 2.9e-35 152.5 130 60.0
Ca_20909_v3 Cicer arietinum L. HOM05D005646 ORTHO05D006828 3.8e-35 152.1 136 57.4
TWI63G1320 Tripterygium wilfordii HOM05D005646 ORTHO05D006828 4.9e-35 151.8 144 52.8
Cpa.g.sc197.4 Carica papaya HOM05D005646 ORTHO05D006828 6.5e-35 151.4 132 56.8
Sed0017230 Sechium edule HOM05D005646 ORTHO05D006828 6.5e-35 151.4 130 59.2
AT2G38780 Arabidopsis thaliana HOM05D005646 ORTHO05D006828 1.4e-34 150.2 110 63.6
TPR.G30507 Trifolium pratense HOM05D005646 ORTHO05D006828 1.4e-34 150.2 135 57.0
C03p25580 Brassica napus HOM05D005646 ORTHO05D006828 1.9e-34 149.8 148 52.0
Sc15g0003140 Simmondsia chinensis HOM05D005646 ORTHO05D006828 4.2e-34 148.7 104 64.4
BolC3t14946H Brassica oleracea HOM05D005646 ORTHO05D006828 5.5e-34 148.3 147 52.4
A03p21590 Brassica napus HOM05D005646 ORTHO05D006828 2.1e-33 146.4 148 50.7
vmacro13731 Vaccinium macrocarpon HOM05D005646 ORTHO05D006828 2.7e-33 146.0 164 51.2
BraA03t11395Z Brassica rapa HOM05D005646 ORTHO05D006828 3.5e-33 145.6 147 51.0
Atru.chr11.2492 Acer truncatum HOM05D005646 ORTHO05D006828 4.6e-33 145.2 164 47.6
PSO341G0002 Papaver somniferum HOM05D005646 ORTHO05D006828 3.0e-32 142.5 111 58.6
unitig_746.g26627 Utricularia gibba HOM05D005646 ORTHO05D006828 6.7e-32 141.4 111 61.3
HPP92_001013 Vanilla planifolia HOM05D005646 ORTHO05D006828 1.1e-31 140.6 118 59.3
TAR053G0001 Trochodendron aralioides HOM05D005646 ORTHO05D006828 4.8e-30 135.2 112 62.5
PSO063G6839 Papaver somniferum HOM05D005646 ORTHO05D006828 6.3e-30 134.8 123 53.7
SEGI_25656 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 1.8e-29 133.3 102 54.9
Mapoly0066s0082 Marchantia polymorpha HOM05D005646 ORTHO05D006828 2.6e-28 129.4 104 59.6
Zm00001eb347150 Zea mays HOM05D005646 ORTHO05D006828 2.6e-28 129.4 108 59.3
Dinv31492 Davidia involucrata HOM05D005646 ORTHO05D006828 2.9e-27 125.9 116 56.0
Os05g0381500 Oryza sativa ssp. japonica HOM05D005646 ORTHO05D006828 2.9e-27 125.9 102 57.8
Prupe.2G029800 Prunus persica HOM05D005646 ORTHO05D006828 5.5e-26 121.7 112 56.2
GSVIVG01000664001 Vitis vinifera HOM05D005646 ORTHO05D006828 9.3e-26 120.9 92 63.0
RcHm_v2.0_Chr2g0113191 Rosa chinensis HOM05D005646 ORTHO05D006828 7.9e-25 117.9 121 51.2
Psat7g183120 Pisum sativum HOM05D005646 ORTHO05D006828 2.3e-24 116.3 119 51.3
AagrBONN_evm.TU.Sc2ySwM_228.261 Anthoceros agrestis HOM05D005646 ORTHO05D006828 1.1e-23 114.0 102 49.0
arahy.Tifrunner.gnm1.ann1.7I4JN8 Arachis hypogaea HOM05D005646 ORTHO05D006828 5.7e-23 111.7 64 78.1
SMO145G0178 Selaginella moellendorffii HOM05D005646 ORTHO05D006828 9.7e-23 110.9 115 47.8
Phvul.011G041800 Phaseolus vulgaris HOM05D005646 ORTHO05D006828 2.8e-22 109.4 112 53.6
Pp3c21_7940 Physcomitrium patens HOM05D005646 ORTHO05D006828 1.1e-21 107.5 103 47.6
AL4G20430 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 2.0e-20 103.2 137 46.7
RcHm_v2.0_Chr4g0400611 Rosa chinensis HOM05D005646 ORTHO05D006828 1.3e-19 100.5 78 61.5
SalBow1G3971 Salvia bowleyana HOM05D005646 ORTHO05D006828 5.5e-18 95.1 52 84.6
arahy.Tifrunner.gnm1.ann1.B52RT5 Arachis hypogaea HOM05D005646 ORTHO05D006828 1.0e-16 90.9 54 74.1
COL.COLO4_25675 Corchorus olitorius HOM05D005646 ORTHO05D006828 2.3e-16 89.7 67 61.2
CBR_g29393 Chara braunii HOM05D005646 ORTHO05D006828 8.8e-16 87.8 102 43.1
Cre13.g607900 Chlamydomonas reinhardtii HOM05D005646 ORTHO05D006828 1.5e-12 77.0 110 37.3
Glyma.18G124100 Glycine max HOM05D005646 ORTHO05D006828 2.0e-12 76.6 81 50.6
RcHm_v2.0_Chr4g0400631 Rosa chinensis HOM05D005646 ORTHO05D006828 1.0e-11 74.3 46 71.7
PRCOL_00006924 Prasinoderma coloniale HOM05D005646 ORTHO05D006828 1.4e-08 63.9 102 36.3


User provided reference genes

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