Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000800 Solanum tuberosum HOM05D040527 ORTHO05D000004 6.4e-87 323.9 152 100.0
PGSC0003DMG400016171 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.3e-28 129.4 154 39.6
Sopen11g019660 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-23 112.5 154 37.7
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-20 102.8 136 38.2
PGSC0003DMG400014363 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.2e-19 100.5 154 34.4
PGSC0003DMG402011647 Solanum tuberosum HOM05D002779 ORTHO05D003074 1.7e-18 96.7 131 37.4
Sopen08g016730 Solanum pennellii HOM05D000003 ORTHO05D012390 1.3e-15 87.0 123 37.4
Sopen06g008270 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-15 86.3 159 31.4
QL10p042354 Quercus lobata HOM05D002009 ORTHO05D005728 8.6e-15 84.3 166 32.5
PGSC0003DMG400013069 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.1e-14 84.0 154 29.2
Aqoxy6G01480 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-14 83.6 159 31.4
Aqoxy4G01680 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-14 83.2 160 33.8
MBI15_g00074_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.9e-14 83.2 159 30.2
PGSC0003DMG403018810 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.5e-14 82.8 142 32.4
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 3.3e-14 82.4 129 34.1
QL02p081065 Quercus lobata HOM05D000003 ORTHO05D000004 5.6e-14 81.6 161 32.3
QL07p024662 Quercus lobata HOM05D000003 ORTHO05D013261 5.6e-14 81.6 153 30.7
QL11p036849 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-13 79.7 155 29.7
QL11p057128 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-13 79.7 153 30.7
PGSC0003DMG400006509 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.8e-13 79.3 153 26.1
PGSC0003DMG400027303 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.6e-13 79.0 134 30.6
QL12p039879 Quercus lobata HOM05D000003 ORTHO05D000004 6.1e-13 78.2 152 30.3
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 8.0e-13 77.8 127 33.9
QL93p0340_0006 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-12 77.0 128 33.6
Aqoxy2G01919 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-12 76.6 152 30.9
CANSAT01G3175 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-12 76.6 158 31.6
QL08p008133 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-12 76.3 157 32.5
QL93p0089_0059 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-12 76.3 128 33.6
PSO210G3134 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-12 75.9 129 29.5
Oeu040057.1 Olea europaea HOM05D000003 ORTHO05D000004 5.2e-12 75.1 153 30.1
PSO675G4334 Papaver somniferum HOM05D000003 ORTHO05D000004 6.8e-12 74.7 146 31.5
QL06p022829 Quercus lobata HOM05D000003 ORTHO05D000004 8.9e-12 74.3 129 33.3
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 8.9e-12 74.3 156 30.8
MBI16_g27832_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.5e-11 73.6 159 30.2
Oeu021161.1 Olea europaea HOM05D000003 ORTHO05D000004 1.5e-11 73.6 153 28.8
QL06p027601 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-11 73.6 152 29.6
PSO513G0072 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-11 73.2 152 28.9
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 2.0e-11 73.2 153 30.7
Aqoxy1G03216 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.6e-11 72.8 159 31.4
Hund12693 Selenicereus undatus HOM05D001165 ORTHO05D000004 2.6e-11 72.8 135 29.6
TAR476G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.6e-11 72.8 149 33.6
GSVIVG01004252001 Vitis vinifera HOM05D000003 ORTHO05D000004 2.6e-11 72.8 160 28.1
ECA247G0237 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.4e-11 72.4 162 31.5
Hund12803 Selenicereus undatus HOM05D000003 ORTHO05D000004 3.4e-11 72.4 160 28.8
Aqoxy4G00307 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.4e-11 72.0 154 30.5
QL06p016008 Quercus lobata HOM05D003860 ORTHO05D004218 4.4e-11 72.0 152 32.2
Oeu032320.1 Olea europaea HOM05D000003 ORTHO05D000004 5.7e-11 71.6 156 28.8
QL01p048042 Quercus lobata HOM05D001672 ORTHO05D000004 5.7e-11 71.6 153 29.4
Sopen06g010980 Solanum pennellii HOM05D000003 ORTHO05D000004 5.7e-11 71.6 69 44.9
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 7.5e-11 71.2 129 31.0
Oeu044182.1 Olea europaea HOM05D000003 ORTHO05D000004 9.8e-11 70.9 92 35.9
PSO832G1445 Papaver somniferum HOM05D000003 ORTHO05D000004 9.8e-11 70.9 161 27.3
QL08p023119 Quercus lobata HOM05D000064 ORTHO05D000004 9.8e-11 70.9 94 37.2
MBI19_g24051_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.3e-10 70.5 128 32.0
QL04p040652 Quercus lobata HOM05D004192 ORTHO05D004917 1.3e-10 70.5 96 36.5
Aqoxy1G02399 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-10 70.1 161 31.7
Nitab4.5_0006425g0100 Nicotiana tabacum HOM05D000003 ORTHO05D000004 1.7e-10 70.1 89 37.1
PSO063G0849 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-10 70.1 154 29.2
Sopen11g018640 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-10 70.1 142 26.8
Oeu035946.1 Olea europaea HOM05D000003 ORTHO05D000004 2.2e-10 69.7 123 31.7
PSO596G0036 Papaver somniferum HOM05D000003 ORTHO05D000004 2.2e-10 69.7 129 29.5
QL02p012254 Quercus lobata HOM05D003211 ORTHO05D003621 2.2e-10 69.7 149 32.9
PSO782G1747 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-10 69.3 129 28.7
Hund14265 Selenicereus undatus HOM05D003118 ORTHO05D003618 2.9e-10 69.3 159 26.4
PSO063G5085 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-10 68.9 114 31.6
PSO561G0076 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-10 68.9 127 31.5
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 4.9e-10 68.6 152 29.6
Oeu005734.1 Olea europaea HOM05D000003 ORTHO05D000004 6.4e-10 68.2 146 31.5
QL02p033301 Quercus lobata HOM05D000003 ORTHO05D000004 6.4e-10 68.2 152 30.3
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 6.4e-10 68.2 128 31.2
MBI05_g25766_MAGBIO Magnolia biondii HOM05D000742 ORTHO05D000924 8.3e-10 67.8 159 28.9
Hund30603 Selenicereus undatus HOM05D000003 ORTHO05D000004 1.4e-09 67.0 93 34.4
Hund30604 Selenicereus undatus HOM05D000003 ORTHO05D000004 1.4e-09 67.0 93 34.4
PSO302G0219 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-09 66.6 162 27.8
QL06p044160 Quercus lobata HOM05D004524 ORTHO05D005477 1.8e-09 66.6 92 38.0
PGSC0003DMG400016384 Solanum tuberosum HOM05D040527 ORTHO05D394859 1.8e-09 66.6 43 55.8
GSVIVG01004123001 Vitis vinifera HOM05D000003 ORTHO05D000004 2.4e-09 66.2 128 31.2
CSS0007080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-09 65.9 159 27.7
ECA236G3489 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.2e-09 65.9 138 33.3
QL08p060724 Quercus lobata HOM05D000003 ORTHO05D000004 4.1e-09 65.5 157 30.6
Oeu024647.1 Olea europaea HOM05D000003 ORTHO05D000004 5.4e-09 65.1 92 35.9
Aqoxy4G01811 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.0e-09 64.7 80 36.2
Aqoxy7G02361 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.2e-09 64.3 80 40.0
Oeu001477.2 Olea europaea HOM05D000003 ORTHO05D000514 9.2e-09 64.3 88 34.1
PSO478G4146 Papaver somniferum HOM05D000003 ORTHO05D000004 9.2e-09 64.3 128 32.0
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 9.2e-09 64.3 72 36.1
Hund00002 Selenicereus undatus HOM05D005986 ORTHO05D007467 9.2e-09 64.3 159 25.2
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-08 63.9 80 36.2
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-08 63.9 156 25.6
MBI11_g04611_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.2e-08 63.9 132 31.1
Oeu027602.1 Olea europaea HOM05D000003 ORTHO05D000004 1.2e-08 63.9 95 33.7
Oeu038887.1 Olea europaea HOM05D000003 ORTHO05D000004 1.6e-08 63.5 82 35.4
QL03p039930 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-08 63.5 114 30.7
QL10p034885 Quercus lobata HOM05D004012 ORTHO05D000004 1.6e-08 63.5 153 28.1
GSVIVG01003937001 Vitis vinifera HOM05D000003 ORTHO05D000004 1.6e-08 63.5 155 29.0
QL02p084961 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-08 63.2 125 28.8
MBI09_g18615_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.7e-08 62.8 155 31.0
QL05p009436 Quercus lobata HOM05D004436 ORTHO05D005179 2.7e-08 62.8 88 37.5
Aqoxy3G01792 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.5e-08 62.4 73 39.7
Aqoxy7G01788 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.5e-08 62.4 80 40.0
PSO302G0073 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-08 62.4 146 28.1
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.6e-08 62.0 134 27.6
PGSC0003DMG402024756 Solanum tuberosum HOM05D040527 ORTHO05D000004 4.6e-08 62.0 44 54.5
Aqoxy7G02094 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.9e-08 61.6 70 44.3
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.9e-08 61.6 156 25.6
Oeu051474.1 Olea europaea HOM05D000003 ORTHO05D000004 5.9e-08 61.6 161 28.6
Aqoxy6G02429 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.8e-08 61.2 79 38.0
MBI16_g26379_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.0e-07 60.8 124 31.5
Oeu001026.1 Olea europaea HOM05D000003 ORTHO05D000004 1.0e-07 60.8 142 31.0
QL01p047991 Quercus lobata HOM05D000399 ORTHO05D000304 1.0e-07 60.8 94 33.0
PGSC0003DMG400032796 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.0e-07 60.8 59 42.4
ECA247G3248 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.3e-07 60.5 69 43.5
PSO144G0151 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-07 60.5 145 26.2
PSO478G3492 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-07 60.5 94 31.9
Hund25051 Selenicereus undatus HOM05D000003 ORTHO05D000004 1.3e-07 60.5 156 25.0
ECA234G2508 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.7e-07 60.1 76 38.2
Sopen04g035270 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-07 60.1 120 30.0
CAN.G1928.2 Capsicum annuum HOM05D001304 ORTHO05D007800 2.3e-07 59.7 77 33.8
Oeu049517.3 Olea europaea HOM05D001787 ORTHO05D000004 2.3e-07 59.7 128 28.9
Thecc.03G017700 Theobroma cacao HOM05D000003 ORTHO05D000004 2.3e-07 59.7 163 27.6
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-07 59.3 169 27.8
ECA240G3401 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.0e-07 59.3 72 38.9
MBI05_g07846_MAGBIO Magnolia biondii HOM05D003982 ORTHO05D004831 3.0e-07 59.3 153 28.8
PSO832G1539 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-07 59.3 114 31.6
Sopen04g024590 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-07 59.3 116 31.9
CSS0022591 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.9e-07 58.9 164 26.2
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 3.9e-07 58.9 142 28.2
ECA234G2032 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.9e-07 58.9 143 32.2
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 3.9e-07 58.9 131 27.5
Sed0024303 Sechium edule HOM05D007588 ORTHO05D001339 3.9e-07 58.9 150 26.7
Hund00011 Selenicereus undatus HOM05D000003 ORTHO05D000004 3.9e-07 58.9 109 28.4
CSS0003615 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.0e-07 58.5 164 26.2
PSO198G0010 Papaver somniferum HOM05D000003 ORTHO05D000004 5.0e-07 58.5 154 26.6
MBI12_g38267_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.6e-07 58.2 124 29.0
ECA247G1165 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.6e-07 57.8 140 28.6
PSO832G2090 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-07 57.8 71 32.4
Aqoxy1G02822 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.1e-06 57.4 70 41.4
HanXRQChr04g0127051 Helianthus annuus HOM05D000003 ORTHO05D000004 1.1e-06 57.4 137 31.4
ECA246G4036 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.5e-06 57.0 74 40.5
PSO063G7028 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-06 57.0 131 28.2
QL01p048139 Quercus lobata HOM05D011240 ORTHO05D014254 1.5e-06 57.0 87 34.5
HanXRQChr14g0451141 Helianthus annuus HOM05D000003 ORTHO05D000004 1.9e-06 56.6 131 28.2
PSO782G1828 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-06 56.6 136 29.4
Atru.chr6.184 Acer truncatum HOM05D000003 ORTHO05D002259 2.5e-06 56.2 159 27.7
ECA232G3889 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.5e-06 56.2 76 36.8
HanXRQChr10g0279601 Helianthus annuus HOM05D000003 ORTHO05D000004 2.5e-06 56.2 148 30.4
MBI10_g16721_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.3e-06 55.8 159 25.8
QL05p000220 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-06 55.8 106 31.1
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 3.3e-06 55.8 127 31.5
Hund24703 Selenicereus undatus HOM05D001739 ORTHO05D006605 3.3e-06 55.8 72 34.7
Atru.chr6.307 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-06 55.5 63 46.0
CSS0022596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-06 55.5 157 28.0
Cpa.g.sc34.10 Carica papaya HOM05D000003 ORTHO05D000004 4.3e-06 55.5 160 27.5
Aqoxy2G01405 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.6e-06 55.1 55 38.2
ECA234G4387 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.6e-06 55.1 72 36.1
MBI01_g26131_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.6e-06 55.1 153 29.4
MBI14_g25878_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.6e-06 55.1 159 27.7
MBI18_g09655_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.6e-06 55.1 91 31.9
Atru.chr6.413 Acer truncatum HOM05D000003 ORTHO05D002259 7.3e-06 54.7 160 28.8
CANSAT54G1748 Cannabis sativa HOM05D000003 ORTHO05D000004 7.3e-06 54.7 95 31.6
Cpa.g.sc44.94 Carica papaya HOM05D000003 ORTHO05D000004 7.3e-06 54.7 156 26.3
ECA240G3367 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.3e-06 54.7 74 40.5
MBI04_g23905_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.3e-06 54.7 133 27.8
Nitab4.5_0000592g0230 Nicotiana tabacum HOM05D000804 ORTHO05D005389 7.3e-06 54.7 83 36.1
Psat3g018800 Pisum sativum HOM05D000003 ORTHO05D000004 7.3e-06 54.7 77 32.5
QL09p018207 Quercus lobata HOM05D000003 ORTHO05D000004 7.3e-06 54.7 52 44.2
GSVIVG01001301001 Vitis vinifera HOM05D005100 ORTHO05D005607 7.3e-06 54.7 72 36.1
PSO063G0767 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-06 54.3 154 28.6


User provided reference genes

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