Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000562 Solanum tuberosum HOM05D005840 ORTHO05D007144 9.4e-164 580.1 287 100.0
Solyc03g081220.1 Solanum lycopersicum HOM05D005840 ORTHO05D007144 1.1e-159 566.6 290 97.2
Sopen03g021950 Solanum pennellii HOM05D005840 ORTHO05D007144 4.1e-159 564.7 292 96.6
CAN.G303.23 Capsicum annuum HOM05D005840 ORTHO05D007144 1.3e-141 506.5 293 87.0
Nitab4.5_0000319g0020 Nicotiana tabacum HOM05D005840 ORTHO05D007144 1.7e-136 489.6 292 85.6
Nitab4.5_0010809g0010 Nicotiana tabacum HOM05D005840 ORTHO05D007144 1.7e-136 489.6 292 85.3
Dinv35383 Davidia involucrata HOM05D005840 ORTHO05D007144 1.4e-114 416.8 278 73.0
CSS0020402 Camellia sinensis var. sinensis HOM05D005840 ORTHO05D007144 4.6e-110 401.7 288 69.4
Cc02_g00800 Coffea canephora HOM05D005840 ORTHO05D007144 6.2e-107 391.3 292 70.2
DCAR_008987 Daucus carota HOM05D005840 ORTHO05D007144 2.2e-104 382.9 293 65.5
Peaxi162Scf00912g10012 Petunia axillaris HOM05D005840 ORTHO05D007144 1.1e-103 380.6 226 85.0
Oeu023690.1 Olea europaea HOM05D005840 ORTHO05D007144 6.0e-102 374.8 282 69.5
TAR375G0732 Trochodendron aralioides HOM05D005840 ORTHO05D007144 9.0e-98 360.9 287 67.6
MSTRG.8611 Avicennia marina HOM05D005840 ORTHO05D007144 3.4e-97 359.0 296 64.5
MSTRG.26975 Avicennia marina HOM05D005840 ORTHO05D007144 1.6e-94 350.1 282 66.3
Lsat_1_v5_gn_9_49980 Lactuca sativa HOM05D005840 ORTHO05D007144 2.3e-93 346.3 284 62.3
SalBow6G2506 Salvia bowleyana HOM05D005840 ORTHO05D007144 3.9e-93 345.5 301 63.8
Cpa.g.sc3.150 Carica papaya HOM05D005840 ORTHO05D007144 6.6e-93 344.7 293 60.4
Migut.F00150 Erythranthe guttata HOM05D005840 ORTHO05D007144 1.3e-91 340.5 295 64.4
SGA_v2.0_scaffold18G08468 Striga asiatica HOM05D005840 ORTHO05D007144 1.4e-90 337.0 284 63.7
Lalb_Chr08g0239571 Lupinus albus HOM05D005840 ORTHO05D007144 9.0e-90 334.3 307 60.3
unitig_37.g11995 Utricularia gibba HOM05D005840 ORTHO05D007144 1.5e-89 333.6 301 59.1
Hma1.2p1_0094F.1_g047400 Hydrangea macrophylla HOM05D005840 ORTHO05D007144 2.6e-89 332.8 220 74.1
PGR042G3207 Punica granatum HOM05D005840 ORTHO05D007144 2.6e-89 332.8 289 61.2
QL09p007163 Quercus lobata HOM05D005840 ORTHO05D007144 3.4e-89 332.4 276 62.7
Lalb_Chr23g0271941 Lupinus albus HOM05D005840 ORTHO05D007144 7.6e-89 331.3 279 63.4
Psat5g071840 Pisum sativum HOM05D005840 ORTHO05D007144 1.3e-88 330.5 295 60.0
TPR.G33360 Trifolium pratense HOM05D005840 ORTHO05D007144 8.4e-88 327.8 294 58.5
FvH4_7g32940 Fragaria vesca HOM05D005840 ORTHO05D007144 1.1e-87 327.4 284 62.3
Oeu055391.1 Olea europaea HOM05D005840 ORTHO05D007144 1.4e-87 327.0 229 71.2
Prupe.2G319100 Prunus persica HOM05D005840 ORTHO05D007144 1.4e-87 327.0 267 62.5
Nn3g18788 Nelumbo nucifera HOM05D005840 ORTHO05D007144 1.9e-87 326.6 277 59.2
Manes.01G043400 Manihot esculenta HOM05D005840 ORTHO05D007144 4.2e-87 325.5 280 60.0
TWI14G0550 Tripterygium wilfordii HOM05D005840 ORTHO05D007144 7.1e-87 324.7 269 61.0
RcHm_v2.0_Chr1g0382901 Rosa chinensis HOM05D005840 ORTHO05D007144 9.3e-87 324.3 291 60.5
Medtr3g092810 Medicago truncatula HOM05D005840 ORTHO05D007144 2.1e-86 323.2 292 58.6
Ca_16781_v3 Cicer arietinum L. HOM05D005840 ORTHO05D007144 6.0e-86 321.6 273 61.2
HanXRQChr10g0305331 Helianthus annuus HOM05D005840 ORTHO05D007144 6.0e-86 321.6 276 63.4
Lsat_1_v5_gn_2_135020 Lactuca sativa HOM05D005840 ORTHO05D007144 1.8e-85 320.1 287 61.7
Thecc.03G209000 Theobroma cacao HOM05D005840 ORTHO05D007144 1.8e-85 320.1 277 59.6
Ciclev10021557m.g Citrus clementina HOM05D005840 ORTHO05D007144 3.0e-85 319.3 265 63.8
FAN10G0422 Fragaria x ananassa HOM05D005840 ORTHO05D007144 3.0e-85 319.3 286 60.8
FAN10G3655 Fragaria x ananassa HOM05D005840 ORTHO05D007144 5.1e-85 318.5 286 60.8
Atru.chr12.2435 Acer truncatum HOM05D005840 ORTHO05D007144 8.7e-85 317.8 275 61.5
Potri.015G002500 Populus trichocarpa HOM05D005840 ORTHO05D007144 8.7e-85 317.8 284 57.4
Duzib084G0063 Durio zibethinus HOM05D005840 ORTHO05D007144 1.5e-84 317.0 271 60.5
FAN03G2485 Fragaria x ananassa HOM05D005840 ORTHO05D007144 1.5e-84 317.0 285 61.1
Lj1g0001826 Lotus japonicus HOM05D005840 ORTHO05D007144 9.6e-84 314.3 302 56.3
Sabra15G0001600 Salix brachista HOM05D005840 ORTHO05D007144 1.6e-83 313.5 265 59.6
CANSAT21G1965 Cannabis sativa HOM05D005840 ORTHO05D007144 2.8e-83 312.8 288 58.7
MD07G1299300 Malus domestica HOM05D005840 ORTHO05D007144 1.1e-82 310.8 285 58.2
THA.LOC104798983 Tarenaya hassleriana HOM05D005840 ORTHO05D007144 1.1e-82 310.8 296 58.4
CiPaw.06G041000 Carya illinoinensis HOM05D005840 ORTHO05D007144 3.1e-82 309.3 216 67.6
Lj3P895T18 Lonicera japonica HOM05D005840 ORTHO05D007144 4.0e-82 308.9 223 67.3
FAN01G0139 Fragaria x ananassa HOM05D005840 ORTHO05D007144 2.6e-81 306.2 286 59.4
Actinidia34271 Actinidia chinensis HOM05D005840 ORTHO05D007144 4.5e-81 305.4 209 68.9
Sp2g22870 Schrenkiella parvula HOM05D005840 ORTHO05D007144 9.9e-81 304.3 298 57.0
Cc11_g13290 Coffea canephora HOM05D005840 ORTHO05D007144 1.3e-80 303.9 226 70.8
AT5G24460 Arabidopsis thaliana HOM05D005840 ORTHO05D007144 2.9e-80 302.8 276 57.2
Thhalv10005309m.g Eutrema salsugineum HOM05D005840 ORTHO05D007144 2.9e-80 302.8 298 56.0
Phvul.009G044800 Phaseolus vulgaris HOM05D005840 ORTHO05D007144 3.8e-80 302.4 294 57.8
Sc19g0000580 Simmondsia chinensis HOM05D005840 ORTHO05D007144 4.9e-80 302.0 272 55.9
MD01G1228500 Malus domestica HOM05D005840 ORTHO05D007144 6.4e-80 301.6 268 58.6
MELO3C005919.2 Cucumis melo HOM05D005840 ORTHO05D007144 1.1e-79 300.8 281 55.2
A09p06480 Brassica napus HOM05D005840 ORTHO05D007144 1.9e-79 300.1 301 56.5
VMungo1309G2416 Vigna mungo HOM05D005840 ORTHO05D007144 1.9e-79 300.1 294 57.5
AL6G36040 Arabidopsis lyrata HOM05D005840 ORTHO05D007144 2.5e-79 299.7 301 55.5
BraA09t36291Z Brassica rapa HOM05D005840 ORTHO05D007144 2.5e-79 299.7 301 56.1
Glyma.06G136800 Glycine max HOM05D005840 ORTHO05D007144 3.2e-79 299.3 294 55.4
Aa31LG11G3710 Aethionema arabicum HOM05D005840 ORTHO05D007144 4.2e-79 298.9 300 55.0
vmacro22785 Vaccinium macrocarpon HOM05D005840 ORTHO05D007144 4.2e-79 298.9 329 51.4
CARHR188950 Cardamine hirsuta HOM05D005840 ORTHO05D007144 5.5e-79 298.5 276 58.3
Gohir.D11G016500 Gossypium hirsutum HOM05D005840 ORTHO05D007144 5.5e-79 298.5 277 57.4
PSO063G5360 Papaver somniferum HOM05D005840 ORTHO05D007144 5.5e-79 298.5 301 55.5
Sed0003210 Sechium edule HOM05D005840 ORTHO05D007144 5.5e-79 298.5 280 58.2
Gorai.004G125300 Gossypium raimondii HOM05D005840 ORTHO05D007144 7.1e-79 298.1 274 58.4
AUR62028079 Chenopodium quinoa HOM05D005840 ORTHO05D007144 2.1e-78 296.6 295 54.9
Gorai.007G017300 Gossypium raimondii HOM05D005840 ORTHO05D007144 2.1e-78 296.6 277 57.8
BolC9t53635H Brassica oleracea HOM05D005840 ORTHO05D007144 2.7e-78 296.2 302 56.0
Gohir.A11G016700 Gossypium hirsutum HOM05D005840 ORTHO05D007144 4.6e-78 295.4 272 59.2
Carub.0006s2229 Capsella rubella HOM05D005840 ORTHO05D007144 6.0e-78 295.0 277 59.6
ClCG01G000060 Citrullus lanatus HOM05D005840 ORTHO05D007144 1.0e-77 294.3 234 62.8
Glyma.04G228100 Glycine max HOM05D005840 ORTHO05D007144 1.0e-77 294.3 295 55.3
Gohir.A08G104700 Gossypium hirsutum HOM05D005840 ORTHO05D007144 1.0e-77 294.3 274 57.7
Rhsim03G0215700 Rhododendron simsii HOM05D005840 ORTHO05D007144 1.0e-77 294.3 227 64.3
Ah.13g070770 Amaranthus hybridus HOM05D005840 ORTHO05D007144 1.3e-77 293.9 286 55.6
BcaC04g23543 Brassica carinata HOM05D005840 ORTHO05D007144 1.8e-77 293.5 298 55.7
C09p07230 Brassica napus HOM05D005840 ORTHO05D007144 1.8e-77 293.5 298 55.7
AUR62005991 Chenopodium quinoa HOM05D005840 ORTHO05D007144 3.9e-77 292.4 292 55.1
A06p35290 Brassica napus HOM05D005840 ORTHO05D007144 1.3e-75 287.3 295 55.3
ECA232G4892 Erigeron canadensis HOM05D005840 ORTHO05D007144 2.1e-75 286.6 210 64.3
CsaV3_5G000100 Cucumis sativus L. HOM05D005840 ORTHO05D007144 3.7e-75 285.8 275 53.1
Haze_00300 Corylus avellana HOM05D005840 ORTHO05D007144 4.8e-75 285.4 207 67.1
MBI12_g45814_MAGBIO Magnolia biondii HOM05D005840 ORTHO05D007144 1.8e-74 283.5 272 54.4
BcaNung01236 Brassica carinata HOM05D005840 ORTHO05D007144 3.1e-74 282.7 301 53.8
BraA06t26455Z Brassica rapa HOM05D005840 ORTHO05D007144 9.0e-74 281.2 308 53.2
COL.COLO4_14373 Corchorus olitorius HOM05D005840 ORTHO05D007144 4.5e-73 278.9 217 64.1
EL10Ac3g05171 Beta vulgaris HOM05D005840 ORTHO05D007144 2.2e-72 276.6 213 62.9
BcaB04g19821 Brassica carinata HOM05D005840 ORTHO05D007144 6.5e-72 275.0 224 62.5
C07p43220 Brassica napus HOM05D005840 ORTHO05D007144 6.5e-72 275.0 224 62.5
vmacro06444 Vaccinium macrocarpon HOM05D005840 ORTHO05D007144 4.2e-71 272.3 271 54.2
PSO782G2283 Papaver somniferum HOM05D005840 ORTHO05D007144 7.1e-71 271.6 209 63.6
Actinidia08699 Actinidia chinensis HOM05D005840 ORTHO05D007144 4.6e-70 268.9 212 62.7
unitig_0.g2444 Utricularia gibba HOM05D005840 ORTHO05D007144 5.1e-69 265.4 202 62.9
unitig_92.g28240 Utricularia gibba HOM05D005840 ORTHO05D007144 6.7e-69 265.0 200 66.0
Aqoxy6G02459 Aquilegia oxysepala HOM05D005840 ORTHO05D007144 1.5e-68 263.8 280 52.5
Aqoxy6G02489 Aquilegia oxysepala HOM05D005840 ORTHO05D007144 1.5e-68 263.8 280 52.5
CDE04G1956 Ceratophyllum demersum HOM05D005840 ORTHO05D007144 1.5e-68 263.8 221 59.7
CDE12G0905 Ceratophyllum demersum HOM05D005840 ORTHO05D007144 1.7e-64 250.4 208 59.1
Sed0025728 Sechium edule HOM05D005840 ORTHO05D007144 2.2e-64 250.0 209 58.9
ATR0661G235 Amborella trichopoda HOM05D005840 ORTHO05D007144 3.2e-55 219.5 216 54.2
HPP92_022381 Vanilla planifolia HOM05D005840 ORTHO05D007144 1.0e-53 214.5 215 54.9
SHI02291 Sapria himalayana HOM05D005840 ORTHO05D007144 5.1e-53 212.2 210 53.8
SEGI_38224 Sequoiadendron giganteum HOM05D005840 ORTHO05D007144 9.7e-52 208.0 200 52.0
BcaB04g19819 Brassica carinata HOM05D005840 ORTHO05D007144 1.2e-49 201.1 189 57.7
COL.COLO4_12096 Corchorus olitorius HOM05D005840 ORTHO05D007144 5.3e-42 175.6 178 53.9
Mapoly0031s0111 Marchantia polymorpha HOM05D005840 ORTHO05D007144 3.5e-41 172.9 219 45.7
Zm00001eb272540 Zea mays HOM05D005840 ORTHO05D007144 6.5e-40 168.7 225 47.6
Pp3c3_29470 Physcomitrium patens HOM05D005840 ORTHO05D007144 2.1e-38 163.7 237 41.8
SMO140G0013 Selaginella moellendorffii HOM05D005840 ORTHO05D007144 3.6e-38 162.9 217 41.5
COL.COLO4_35601 Corchorus olitorius HOM05D005840 ORTHO05D007144 1.0e-37 161.4 210 43.3
Os06g0712200 Oryza sativa ssp. japonica HOM05D005840 ORTHO05D007144 2.0e-36 157.1 221 45.7
BcaNung02020 Brassica carinata HOM05D005840 ORTHO05D007144 5.7e-36 155.6 129 62.0
CBR_g20004 Chara braunii HOM05D005840 ORTHO05D007144 5.3e-34 149.1 174 50.0
BcaB04g19822 Brassica carinata HOM05D005840 ORTHO05D007144 3.4e-28 129.8 120 57.5
CAN.G2.4 Capsicum annuum HOM05D005840 ORTHO05D007144 3.4e-28 129.8 78 82.1
Gohir.D08G116401 Gossypium hirsutum HOM05D005840 ORTHO05D007144 4.8e-27 125.9 115 58.3
Duzib114G0266 Durio zibethinus HOM05D005840 ORTHO05D007144 7.2e-23 112.1 149 42.3
SalBow4G0698 Salvia bowleyana HOM05D001856 ORTHO05D007144 4.9e-19 99.4 86 58.1
SalBow6G2140 Salvia bowleyana HOM05D005840 ORTHO05D007144 5.9e-17 92.4 61 67.2
Cre01.g012300 Chlamydomonas reinhardtii HOM05D005840 ORTHO05D007144 6.8e-13 79.0 148 36.5
COL.COLO4_35602 Corchorus olitorius HOM05D005840 ORTHO05D007144 4.4e-12 76.3 87 44.8
Potri.010G149800 Populus trichocarpa HOM05D005840 ORTHO05D007144 2.2e-11 73.9 74 50.0


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