Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 4.8e-103 377.9 195 100.0
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 2.2e-95 352.4 198 92.9
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 6.3e-95 350.9 197 93.4
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 1.8e-94 349.4 197 92.9
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 5.3e-94 347.8 196 92.9
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 3.1e-78 295.4 201 79.1
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 4.5e-77 291.6 201 77.6
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 4.0e-65 251.9 161 81.4
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 4.9e-63 245.0 142 90.8
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 4.6e-61 238.4 195 65.1
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 4.0e-57 225.3 189 67.2
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 3.7e-55 218.8 185 63.8
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 6.0e-53 211.5 190 62.6
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 5.0e-52 208.4 167 65.3
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 6.6e-52 208.0 191 60.7
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 8.6e-52 207.6 168 66.7
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 1.5e-51 206.8 173 64.2
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 2.5e-51 206.1 173 63.6
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 4.7e-50 201.8 168 61.9
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 1.4e-49 200.3 159 66.7
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.8e-49 199.9 180 59.4
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.0e-48 196.4 174 62.1
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 2.0e-48 196.4 170 60.6
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 3.4e-48 195.7 178 58.4
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 2.4e-46 189.5 171 57.3
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 3.2e-46 189.1 173 60.7
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 9.2e-46 187.6 203 55.2
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 2.7e-45 186.0 168 60.7
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 1.0e-44 184.1 161 60.9
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 2.3e-44 183.0 167 61.1
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 3.0e-44 182.6 176 55.1
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 3.9e-44 182.2 170 57.1
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 6.6e-44 181.4 176 57.4
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 6.6e-44 181.4 162 58.6
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 8.6e-44 181.0 115 80.9
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 8.6e-44 181.0 165 56.4
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 2.5e-43 179.5 165 56.4
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 3.3e-43 179.1 171 58.5
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 3.3e-43 179.1 156 58.3
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 5.6e-43 178.3 170 55.3
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.6e-42 176.8 171 57.9
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 2.1e-42 176.4 164 59.1
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 3.6e-42 175.6 162 54.9
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 3.6e-42 175.6 164 56.7
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.8e-41 173.3 159 56.0
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 2.4e-41 172.9 159 56.0
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 3.1e-41 172.6 164 57.9
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 3.1e-41 172.6 164 56.7
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 3.1e-41 172.6 165 57.0
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 4.0e-41 172.2 165 53.9
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 8.9e-41 171.0 164 57.3
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 2.0e-40 169.9 164 57.9
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 2.0e-40 169.9 164 56.7
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 3.8e-39 165.6 162 51.9
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 4.9e-39 165.2 160 55.0
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 2.4e-38 162.9 170 52.4
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 1.6e-37 160.2 189 51.3
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 2.1e-37 159.8 167 50.9
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 1.7e-36 156.8 198 46.5
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 8.6e-36 154.5 153 52.9
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 1.6e-34 150.2 176 44.9
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 2.8e-34 149.4 173 48.0
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 6.2e-34 148.3 172 49.4
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 8.1e-34 147.9 156 52.6
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 3.1e-33 146.0 160 45.6
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 5.2e-33 145.2 154 44.2
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 6.9e-33 144.8 163 49.7
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.6e-32 142.9 160 47.5
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 3.4e-32 142.5 162 50.6
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 9.9e-32 141.0 161 48.4
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 1.3e-31 140.6 127 58.3
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 2.9e-31 139.4 163 47.9
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 4.9e-31 138.7 157 49.7
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 4.9e-31 138.7 164 48.8
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 4.9e-31 138.7 159 50.3
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 6.4e-31 138.3 157 49.0
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 6.4e-31 138.3 157 49.0
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 1.9e-30 136.7 164 48.2
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 1.9e-30 136.7 164 48.2
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 3.2e-30 136.0 157 47.8
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 4.2e-30 135.6 157 47.8
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 4.2e-30 135.6 157 48.4
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 5.4e-30 135.2 157 47.8
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 9.3e-30 134.4 150 46.7
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 1.2e-29 134.0 133 52.6
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.6e-29 133.7 157 48.4
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 2.1e-29 133.3 152 45.4
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 2.1e-29 133.3 159 46.5
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 1.0e-28 131.0 164 45.7
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 3.0e-28 129.4 152 45.4
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 8.7e-28 127.9 116 62.1
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.9e-27 126.7 152 44.7
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 2.8e-26 122.9 156 43.6
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 5.6e-19 98.6 142 45.1
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 4.0e-17 92.4 102 46.1
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 1.2e-16 90.9 92 54.3
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 1.5e-16 90.5 131 35.1
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 2.0e-16 90.1 109 50.5
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.1e-14 84.3 69 59.4
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 2.4e-14 83.2 110 43.6
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 6.0e-13 78.6 49 77.6
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 2.9e-07 59.7 44 56.8


User provided reference genes

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