Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000290 Solanum tuberosum HOM05D008052 ORTHO05D010155 6.6e-117 424.1 221 100.0
Sopen12g003550 Solanum pennellii HOM05D008052 ORTHO05D010155 9.0e-106 387.1 221 89.1
Nitab4.5_0000743g0110 Nicotiana tabacum HOM05D008052 ORTHO05D010155 1.3e-67 260.4 221 66.5
Solyc12g008610.3 Solanum lycopersicum HOM05D008052 ORTHO05D010155 8.2e-67 257.7 153 88.9
Nitab4.5_0004570g0050 Nicotiana tabacum HOM05D008052 ORTHO05D010155 2.4e-66 256.1 221 64.7
Cc02_g33610 Coffea canephora HOM05D008052 ORTHO05D010155 8.0e-38 161.4 179 49.2
Migut.N01951 Erythranthe guttata HOM05D008052 ORTHO05D010155 1.7e-35 153.7 176 51.1
MSTRG.28007 Avicennia marina HOM05D008052 ORTHO05D010155 1.4e-34 150.6 206 45.1
SalBow3G2994 Salvia bowleyana HOM05D008052 ORTHO05D010155 1.2e-33 147.5 172 48.3
TAR633G0175 Trochodendron aralioides HOM05D008052 ORTHO05D010155 8.0e-30 134.8 180 45.0
TAR362G0883 Trochodendron aralioides HOM05D008052 ORTHO05D010155 1.2e-28 131.0 155 47.1
Sc09g0003250 Simmondsia chinensis HOM05D008052 ORTHO05D010155 1.4e-26 124.0 198 40.9
Peaxi162Scf00006g00146 Petunia axillaris HOM05D008052 ORTHO05D010155 3.6e-22 109.4 212 42.5
Sabra13G0025900 Salix brachista HOM05D008052 ORTHO05D010155 1.8e-21 107.1 163 47.2
Nn4g26221 Nelumbo nucifera HOM05D008052 ORTHO05D010155 5.2e-21 105.5 175 39.4
Thecc.05G305400 Theobroma cacao HOM05D008052 ORTHO05D010155 8.9e-21 104.8 176 36.9
Potri.013G024500 Populus trichocarpa HOM05D008052 ORTHO05D010155 5.8e-20 102.1 163 44.8
Ciclev10003106m.g Citrus clementina HOM05D008052 ORTHO05D010155 3.7e-19 99.4 188 36.2
Duzib106G0088 Durio zibethinus HOM05D008052 ORTHO05D010155 1.1e-18 97.8 205 33.7
Cpa.g.sc48.31 Carica papaya HOM05D008052 ORTHO05D010155 5.4e-18 95.5 191 39.8
DCAR_022183 Daucus carota HOM05D008052 ORTHO05D010155 1.2e-17 94.4 150 43.3
SGA_v2.0_scaffold81G26084 Striga asiatica HOM05D008052 ORTHO05D010155 1.2e-17 94.4 148 38.5
ClCG02G015920 Citrullus lanatus HOM05D008052 ORTHO05D010155 2.1e-17 93.6 204 34.8
CANSAT54G0621 Cannabis sativa HOM05D008052 ORTHO05D010155 1.3e-16 90.9 215 36.7
Ah.05g168010 Amaranthus hybridus HOM05D038607 ORTHO05D010155 1.7e-16 90.5 202 38.6
Gorai.007G342900 Gossypium raimondii HOM05D008052 ORTHO05D010155 2.3e-16 90.1 186 34.4
CsaV3_2G005120 Cucumis sativus L. HOM05D008052 ORTHO05D000003 5.1e-16 89.0 180 35.0
Ah.06g189190 Amaranthus hybridus HOM05D038607 ORTHO05D010155 1.1e-15 87.8 202 38.1
Gohir.A11G296000 Gossypium hirsutum HOM05D008052 ORTHO05D010155 1.1e-15 87.8 186 34.4
Manes.09G165300 Manihot esculenta HOM05D008052 ORTHO05D010155 1.1e-15 87.8 203 35.5
TWI56G0838 Tripterygium wilfordii HOM05D008052 ORTHO05D010155 1.9e-15 87.0 162 38.3
Gohir.D11G310900 Gossypium hirsutum HOM05D008052 ORTHO05D010155 7.3e-15 85.1 186 33.9
MELO3C004280.2 Cucumis melo HOM05D008052 ORTHO05D010155 1.6e-14 84.0 212 33.5
Sed0020219 Sechium edule HOM05D008052 ORTHO05D010155 2.1e-14 83.6 217 35.9
PGR031G3742 Punica granatum HOM05D008052 ORTHO05D010155 4.7e-14 82.4 198 33.8
RcHm_v2.0_Chr3g0454361 Rosa chinensis HOM05D008052 ORTHO05D010155 1.4e-13 80.9 188 35.1
PSO170G6008 Papaver somniferum HOM05D008052 ORTHO05D010155 1.8e-13 80.5 163 36.8
Atru.chr2.447 Acer truncatum HOM05D008052 ORTHO05D010155 2.3e-13 80.1 193 33.2
Lsat_1_v5_gn_2_64240 Lactuca sativa HOM05D008052 ORTHO05D010155 2.3e-13 80.1 221 37.6
FvH4_6g05580 Fragaria vesca HOM05D008052 ORTHO05D010155 1.2e-12 77.8 232 34.9
QL02p094100 Quercus lobata HOM05D008052 ORTHO05D010155 1.7e-11 73.9 132 45.5
Aqoxy2G03290 Aquilegia oxysepala HOM05D008052 ORTHO05D010155 2.2e-11 73.6 183 39.3
FAN05G1355 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.9e-11 73.2 206 33.5
FAN05G4790 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.9e-11 73.2 206 33.5
Prupe.6G328200 Prunus persica HOM05D008052 ORTHO05D010155 3.8e-11 72.8 196 33.2
PSO302G0085 Papaver somniferum HOM05D008052 ORTHO05D010155 6.4e-11 72.0 163 40.5
FAN14G3020 Fragaria x ananassa HOM05D008052 ORTHO05D010155 1.6e-09 67.4 182 35.2
THA.LOC104802806 Tarenaya hassleriana HOM05D008052 ORTHO05D010155 1.6e-09 67.4 169 30.2
Glyma.10G155700 Glycine max HOM05D014832 ORTHO05D016666 6.0e-09 65.5 191 32.5
Cfa006565 Carpinus fangiana HOM05D008052 ORTHO05D010155 3.0e-08 63.2 128 35.2
unitig_0.g2377 Utricularia gibba HOM05D008052 ORTHO05D010155 5.1e-08 62.4 150 34.7
CARHR186050 Cardamine hirsuta HOM05D008052 ORTHO05D010155 1.1e-07 61.2 206 30.6
Thhalv10005402m.g Eutrema salsugineum HOM05D008052 ORTHO05D010155 1.9e-07 60.5 221 33.5
Sed0004902 Sechium edule HOM05D008052 ORTHO05D010155 2.5e-07 60.1 233 31.3
AT5G27440 Arabidopsis thaliana HOM05D008052 ORTHO05D010155 4.3e-07 59.3 188 29.3
A06p37460 Brassica napus HOM05D008052 ORTHO05D010155 5.6e-07 58.9 190 30.0
BraA06t26670Z Brassica rapa HOM05D008052 ORTHO05D010155 5.6e-07 58.9 190 30.0
FAN14G1634 Fragaria x ananassa HOM05D008052 ORTHO05D010155 7.3e-07 58.5 182 35.2
Glyma.20G232600 Glycine max HOM05D014832 ORTHO05D016666 1.2e-06 57.8 193 32.1
Sp2g20660 Schrenkiella parvula HOM05D008052 ORTHO05D010155 8.1e-06 55.1 184 31.0


User provided reference genes

Program Settings