Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000235 Solanum tuberosum HOM05D004435 ORTHO05D005103 3.7e-105 384.8 182 100.0
Sopen01g039830 Solanum pennellii HOM05D004435 ORTHO05D005103 1.8e-104 382.5 182 99.5
Solyc01g096110.3 Solanum lycopersicum HOM05D004435 ORTHO05D005103 2.6e-103 378.6 182 98.4
Nitab4.5_0001763g0010 Nicotiana tabacum HOM05D004435 ORTHO05D005103 5.7e-98 360.9 179 94.4
CAN.G1415.18 Capsicum annuum HOM05D004435 ORTHO05D005103 3.7e-97 358.2 177 94.9
Peaxi162Scf00345g00125 Petunia axillaris HOM05D004435 ORTHO05D005103 3.7e-97 358.2 177 93.8
Nitab4.5_0007244g0020 Nicotiana tabacum HOM05D004435 ORTHO05D005103 4.8e-97 357.8 182 93.4
Cc02_g39580 Coffea canephora HOM05D004435 ORTHO05D005103 1.5e-82 309.7 179 80.4
SGA_v2.0_scaffold5G03029 Striga asiatica HOM05D004435 ORTHO05D005103 3.3e-82 308.5 172 83.1
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 1.3e-81 306.6 184 77.7
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 2.2e-81 305.8 184 78.3
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 6.3e-81 304.3 179 79.3
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 6.3e-81 304.3 184 77.7
Migut.B01890 Erythranthe guttata HOM05D004435 ORTHO05D005103 1.1e-80 303.5 179 79.9
Prupe.2G190800 Prunus persica HOM05D004435 ORTHO05D005103 1.4e-80 303.1 184 76.6
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 1.8e-80 302.8 180 79.4
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 1.8e-80 302.8 185 76.8
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 4.1e-80 301.6 185 76.2
Cpa.g.sc96.43 Carica papaya HOM05D004435 ORTHO05D005103 9.1e-80 300.4 182 75.3
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 1.6e-79 299.7 182 76.4
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 2.7e-79 298.9 182 76.4
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 3.5e-79 298.5 175 78.3
Thecc.01G340200 Theobroma cacao HOM05D004435 ORTHO05D005103 3.5e-79 298.5 185 75.1
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 4.5e-79 298.1 182 77.5
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 1.7e-78 296.2 182 73.6
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 1.7e-78 296.2 176 77.3
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 2.2e-78 295.8 181 76.8
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.2e-78 295.8 184 76.1
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.2e-78 295.8 184 76.1
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 2.9e-78 295.4 186 72.6
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 2.9e-78 295.4 184 74.5
ECA234G2843 Erigeron canadensis HOM05D004435 ORTHO05D005103 3.8e-78 295.0 181 75.7
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 3.8e-78 295.0 184 76.6
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 3.8e-78 295.0 184 76.6
TAR374G0936 Trochodendron aralioides HOM05D004435 ORTHO05D005103 3.8e-78 295.0 182 74.7
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 6.5e-78 294.3 181 73.5
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 8.5e-78 293.9 177 76.8
EL10Ac1g00244 Beta vulgaris HOM05D004435 ORTHO05D005103 2.5e-77 292.4 182 73.6
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 7.2e-77 290.8 184 75.0
Lj7A498G38 Lonicera japonica HOM05D004435 ORTHO05D005103 2.1e-76 289.3 179 72.6
Ah.05g179380 Amaranthus hybridus HOM05D004435 ORTHO05D005103 8.0e-76 287.3 180 73.9
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 1.0e-75 287.0 178 71.3
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 1.0e-75 287.0 177 74.6
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 2.3e-75 285.8 184 72.8
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 2.3e-75 285.8 177 74.0
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 3.0e-75 285.4 184 69.6
CARHR141900 Cardamine hirsuta HOM05D004435 ORTHO05D005103 2.0e-74 282.7 176 72.2
Carub.0004s2928 Capsella rubella HOM05D004435 ORTHO05D005103 2.6e-74 282.3 176 72.7
HanXRQChr17g0563351 Helianthus annuus HOM05D004435 ORTHO05D005103 2.6e-74 282.3 181 71.3
unitig_736.g22808 Utricularia gibba HOM05D004435 ORTHO05D005103 5.7e-74 281.2 185 70.3
BolC4t21789H Brassica oleracea HOM05D004435 ORTHO05D005103 7.5e-74 280.8 176 72.2
BcaC02g12673 Brassica carinata HOM05D004435 ORTHO05D005103 9.8e-74 280.4 176 72.2
Aa31LG1G27940 Aethionema arabicum HOM05D004435 ORTHO05D005103 1.3e-73 280.0 176 71.6
Phvul.010G115000 Phaseolus vulgaris HOM05D004435 ORTHO05D005103 1.7e-73 279.6 180 72.2
A05p01210 Brassica napus HOM05D004435 ORTHO05D005103 2.2e-73 279.3 176 71.6
BraA05t19122Z Brassica rapa HOM05D004435 ORTHO05D005103 2.2e-73 279.3 176 71.6
Sp4g28610 Schrenkiella parvula HOM05D004435 ORTHO05D005103 2.2e-73 279.3 176 72.2
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 2.8e-73 278.9 179 71.5
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 3.7e-73 278.5 180 71.7
Thhalv10001279m.g Eutrema salsugineum HOM05D004435 ORTHO05D005103 4.8e-73 278.1 176 72.2
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 4.8e-73 278.1 175 74.3
AT2G46560 Arabidopsis thaliana HOM05D004435 ORTHO05D005103 6.3e-73 277.7 176 71.6
C04p01360 Brassica napus HOM05D004435 ORTHO05D005103 6.3e-73 277.7 176 71.6
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 6.3e-73 277.7 183 70.5
MELO3C006012.2 Cucumis melo HOM05D004435 ORTHO05D005103 6.3e-73 277.7 177 73.4
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 6.3e-73 277.7 185 69.7
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 6.3e-73 277.7 180 72.2
Sc01g0002520 Simmondsia chinensis HOM05D004435 ORTHO05D005103 6.3e-73 277.7 179 70.9
AL4G45990 Arabidopsis lyrata HOM05D004435 ORTHO05D005103 1.4e-72 276.6 176 71.0
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 1.8e-72 276.2 180 72.2
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 1.8e-72 276.2 180 72.2
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 2.4e-72 275.8 177 72.9
ATR0605G027 Amborella trichopoda HOM05D004435 ORTHO05D005103 3.1e-72 275.4 181 70.7
MBI06_g46370_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 3.1e-72 275.4 183 69.4
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 4.1e-72 275.0 180 72.2
DCAR_008666 Daucus carota HOM05D004435 ORTHO05D005103 4.1e-72 275.0 181 70.7
DCAR_008667 Daucus carota HOM05D004435 ORTHO05D005103 4.1e-72 275.0 181 70.7
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 5.4e-72 274.6 179 70.4
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 7.0e-72 274.2 178 69.7
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 9.1e-72 273.9 179 71.5
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 1.6e-71 273.1 178 69.7
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 1.6e-71 273.1 175 73.7
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 2.0e-71 272.7 179 72.6
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 5.0e-70 268.1 173 73.4
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 5.0e-70 268.1 177 70.1
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 6.5e-70 267.7 179 68.2
THA.LOC104802083 Tarenaya hassleriana HOM05D004435 ORTHO05D005103 8.5e-70 267.3 187 68.4
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 1.1e-69 266.9 179 70.9
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 3.2e-69 265.4 179 67.0
TPR.G20238 Trifolium pratense HOM05D004435 ORTHO05D005103 5.5e-69 264.6 173 71.1
Zm00001eb356500 Zea mays HOM05D004435 ORTHO05D005103 1.5e-66 256.5 181 64.6
Os01g0551900 Oryza sativa ssp. japonica HOM05D004435 ORTHO05D005103 2.6e-66 255.8 182 66.5
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 3.4e-66 255.4 177 66.7
FAN01G0536 Fragaria x ananassa HOM05D004435 ORTHO05D005103 4.9e-65 251.5 157 75.8
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 8.3e-65 250.8 175 67.4
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 7.3e-61 237.7 181 66.3
CDE10G1324 Ceratophyllum demersum HOM05D004435 ORTHO05D005103 1.1e-56 223.8 176 57.4
Lsat_1_v5_gn_4_33701 Lactuca sativa HOM05D004435 ORTHO05D005103 2.4e-56 222.6 179 61.5
Pp3c3_34200 Physcomitrium patens HOM05D004435 ORTHO05D005103 2.7e-47 192.6 174 51.7
AagrBONN_evm.TU.Sc2ySwM_228.2861 Anthoceros agrestis HOM05D004435 ORTHO05D005103 4.3e-45 185.3 186 46.8
SMO203G0146 Selaginella moellendorffii HOM05D004435 ORTHO05D005103 1.2e-44 183.7 174 50.0
Peaxi162Scf00345g00113 Petunia axillaris HOM05D002646 ORTHO05D002782 1.9e-37 159.8 84 84.5
HanXRQChr10g0310771 Helianthus annuus HOM05D004435 ORTHO05D005103 1.5e-34 150.2 114 64.9
CBR_g19326 Chara braunii HOM05D004435 ORTHO05D005103 4.4e-34 148.7 171 44.4
Actinidia20091 Actinidia chinensis HOM05D004435 ORTHO05D005103 1.7e-22 110.2 106 53.8
HanXRQChr03g0082981 Helianthus annuus HOM05D004435 ORTHO05D005103 2.3e-22 109.8 120 52.5
Hma1.2p1_0101F.1_g049290 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 8.1e-20 101.3 85 60.0
MD07G1152500 Malus domestica HOM05D004435 ORTHO05D005103 3.8e-17 92.4 49 83.7
MCO11G580 Micromonas commoda HOM05D004435 ORTHO05D005103 3.6e-12 75.9 168 31.0


User provided reference genes

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