Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 0.0e+00 1274.2 669 100.0
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 0.0e+00 1246.1 669 97.5
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 0.0e+00 1238.8 669 97.2
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 0.0e+00 1147.1 669 90.1
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 0.0e+00 1101.3 670 86.9
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 0.0e+00 1100.9 668 86.7
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 0.0e+00 1092.4 670 86.3
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 4.8e-243 844.7 671 68.3
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.3e-240 836.6 669 67.6
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 7.1e-239 830.9 679 67.6
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 1.6e-238 829.7 670 67.3
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 6.7e-237 824.3 674 67.8
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 4.8e-235 818.1 671 65.4
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 8.1e-235 817.4 674 66.3
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 1.3e-229 800.0 671 65.4
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 2.3e-229 799.3 671 65.1
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 9.6e-228 793.9 667 64.5
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 1.3e-227 793.5 674 64.4
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 1.6e-227 793.1 674 64.7
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 1.8e-226 789.6 673 63.6
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 1.7e-224 783.1 670 63.4
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 1.6e-222 776.5 673 64.0
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 2.1e-222 776.2 673 63.9
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 4.6e-222 775.0 675 63.4
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 1.3e-221 773.5 670 64.2
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 1.8e-221 773.1 672 62.5
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 5.1e-221 771.5 676 62.7
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 1.9e-220 769.6 671 61.8
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 1.3e-219 766.9 698 62.6
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 6.3e-219 764.6 670 62.8
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.5e-217 760.0 671 62.3
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 2.6e-217 759.2 699 61.9
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 7.7e-217 757.7 684 61.4
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 1.3e-216 756.9 673 63.6
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 5.0e-216 755.0 673 62.7
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 8.5e-216 754.2 671 62.1
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 8.5e-216 754.2 673 62.4
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 8.5e-216 754.2 674 62.8
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.1e-215 753.8 669 62.2
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.6e-214 750.0 668 61.5
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 1.0e-213 747.3 673 62.9
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 3.0e-213 745.7 670 61.0
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.1e-212 743.8 690 61.2
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 4.4e-212 741.9 670 61.6
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 8.2e-211 737.6 678 60.2
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 6.9e-210 734.6 677 61.6
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 9.1e-210 734.2 660 62.1
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 9.1e-210 734.2 670 61.9
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 1.5e-209 733.4 670 60.9
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 4.5e-209 731.9 667 61.5
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 1.0e-208 730.7 670 60.9
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 8.5e-208 727.6 674 59.6
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 1.4e-207 726.9 676 59.5
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 3.2e-207 725.7 671 58.4
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.2e-206 723.8 681 60.6
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 4.7e-206 721.8 674 59.8
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.1e-206 721.5 671 60.2
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 1.8e-205 719.9 660 60.0
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 3.0e-205 719.2 681 60.5
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 6.7e-205 718.0 693 60.3
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 7.4e-204 714.5 673 58.4
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 9.7e-204 714.1 661 61.4
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.8e-203 712.6 684 59.5
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.8e-203 712.6 684 59.5
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 1.7e-200 703.4 663 59.6
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.1e-199 700.7 675 59.3
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 1.4e-197 693.7 673 58.8
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 5.2e-197 691.8 684 58.8
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 2.6e-196 689.5 654 59.8
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 1.4e-194 683.7 628 62.1
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 1.8e-194 683.3 650 60.0
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 4.5e-193 678.7 671 57.8
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 4.5e-193 678.7 599 62.6
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 6.5e-192 674.9 655 59.1
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 6.5e-192 674.9 673 57.4
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 1.5e-191 673.7 675 57.2
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 2.1e-190 669.8 669 55.2
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 1.2e-188 664.1 685 56.9
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 2.8e-187 659.4 667 55.0
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 7.7e-185 651.4 645 58.0
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 2.2e-184 649.8 666 56.3
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 1.2e-182 644.0 661 55.4
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 2.1e-182 643.3 676 55.5
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 2.8e-182 642.9 672 55.1
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 8.0e-182 641.3 674 56.8
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 3.5e-177 625.9 655 54.7
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 4.5e-177 625.5 469 69.1
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 7.8e-177 624.8 640 56.7
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 5.0e-176 622.1 675 53.6
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 6.6e-176 621.7 678 52.5
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 1.5e-175 620.5 679 53.6
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 9.5e-175 617.8 676 52.7
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 1.8e-170 603.6 679 51.3
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 1.3e-168 597.4 676 51.3
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 8.6e-168 594.7 679 51.1
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 2.1e-166 590.1 674 51.8
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 1.4e-165 587.4 674 51.8
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 4.0e-165 585.9 674 51.6
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 2.0e-164 583.6 674 51.2
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.0e-136 490.0 694 44.2
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 1.3e-134 484.6 361 72.6
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 2.1e-134 483.8 685 43.4
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 7.9e-129 465.3 709 40.5
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 1.3e-128 464.5 678 45.3
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 5.1e-128 462.6 627 46.1
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 6.0e-121 439.1 562 47.2
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 4.8e-118 429.5 673 40.6
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 2.4e-117 427.2 310 74.2
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 3.2e-106 390.2 337 61.1
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 2.1e-97 360.9 335 59.1
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 1.0e-96 358.6 310 61.6
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 1.7e-75 288.1 251 62.5
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.4e-72 278.5 610 32.3
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 3.5e-52 210.7 249 51.4
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 4.3e-42 177.2 319 38.9
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 3.6e-41 174.1 259 43.2
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.5e-39 168.7 221 42.1
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 7.8e-28 129.8 356 30.6
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 9.0e-16 89.7 159 40.3
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 9.0e-16 89.7 178 33.1
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 5.4e-13 80.5 90 48.9
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 1.2e-07 62.8 206 28.6


User provided reference genes

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