Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000154 Solanum tuberosum HOM05D009491 ORTHO05D003796 6.2e-140 500.7 247 100.0
Sopen01g038300 Solanum pennellii HOM05D009491 ORTHO05D003796 6.3e-76 288.1 204 74.5
PGSC0003DMG400036166 Solanum tuberosum HOM05D009491 ORTHO05D003796 2.0e-61 240.0 136 84.6
CAN.G616.30 Capsicum annuum HOM05D009491 ORTHO05D003796 4.4e-45 185.7 213 47.4
CAN.G78.33 Capsicum annuum HOM05D008050 ORTHO05D003796 7.1e-43 178.3 198 50.5
Nitab4.5_0009087g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 1.1e-40 171.0 198 47.5
Nitab4.5_0003111g0070 Nicotiana tabacum HOM05D009491 ORTHO05D003796 2.5e-40 169.9 212 45.8
Nitab4.5_0009210g0020 Nicotiana tabacum HOM05D009491 ORTHO05D003796 2.5e-40 169.9 198 47.0
Nitab4.5_0002160g0040 Nicotiana tabacum HOM05D009491 ORTHO05D003796 4.3e-40 169.1 199 48.7
Nitab4.5_0002608g0030 Nicotiana tabacum HOM05D009491 ORTHO05D003796 4.3e-40 169.1 196 46.9
Nitab4.5_0022592g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 1.4e-38 164.1 199 46.7
PGSC0003DMG400046261 Solanum tuberosum HOM05D009491 ORTHO05D003796 1.3e-36 157.5 177 51.4
Nitab4.5_0024412g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 2.2e-36 156.8 216 44.9
CAN.G78.31 Capsicum annuum HOM05D001826 ORTHO05D004184 6.4e-36 155.2 178 50.0
CAN.G616.26 Capsicum annuum HOM05D009491 ORTHO05D003796 4.2e-35 152.5 213 44.1
Peaxi162Scf00397g00022 Petunia axillaris HOM05D008050 ORTHO05D003796 4.2e-35 152.5 207 45.4
PGSC0003DMG400009377 Solanum tuberosum HOM05D009491 ORTHO05D003796 5.4e-35 152.1 178 51.1
Peaxi162Scf01007g00210 Petunia axillaris HOM05D009491 ORTHO05D003796 9.3e-35 151.4 236 38.1
Peaxi162Scf01007g00022 Petunia axillaris HOM05D009491 ORTHO05D003796 2.1e-34 150.2 231 38.5
Peaxi162Scf01007g00024 Petunia axillaris HOM05D009491 ORTHO05D003796 2.1e-34 150.2 231 38.5
Peaxi162Scf00397g00112 Petunia axillaris HOM05D009491 ORTHO05D003796 1.3e-33 147.5 183 48.1
Peaxi162Scf37870g00003 Petunia axillaris HOM05D009491 ORTHO05D003796 1.3e-33 147.5 183 48.1
Peaxi162Scf00009g00021 Petunia axillaris HOM05D009491 ORTHO05D003796 5.1e-33 145.6 164 45.7
PGSC0003DMG400038867 Solanum tuberosum HOM05D009491 ORTHO05D003796 2.4e-30 136.7 180 49.4
Peaxi162Scf01007g00110 Petunia axillaris HOM05D009491 ORTHO05D003796 6.9e-30 135.2 240 35.8
Peaxi162Scf00397g00002 Petunia axillaris HOM05D009491 ORTHO05D003796 1.3e-28 131.0 200 41.5
Solyc07g053680.2 Solanum lycopersicum HOM05D009491 ORTHO05D003796 1.7e-28 130.6 175 46.9
Sopen07g027650 Solanum pennellii HOM05D009491 ORTHO05D003796 2.9e-28 129.8 206 43.2
CAN.G616.28 Capsicum annuum HOM05D009491 ORTHO05D003796 1.1e-27 127.9 104 54.8
Peaxi162Scf00106g00206 Petunia axillaris HOM05D008050 ORTHO05D003796 3.2e-27 126.3 146 45.9
CAN.G135.83 Capsicum annuum HOM05D008050 ORTHO05D003796 9.6e-24 114.8 212 37.7
PGSC0003DMG400007065 Solanum tuberosum HOM05D008050 ORTHO05D003796 3.7e-23 112.8 185 33.0
Dinv05036 Davidia involucrata HOM05D002630 ORTHO05D000952 1.1e-22 111.3 155 41.3
Nitab4.5_0013311g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.9e-20 102.4 184 33.2
CAN.G894.4 Capsicum annuum HOM05D008050 ORTHO05D003796 6.5e-20 102.1 232 32.3
Peaxi162Scf00017g00243 Petunia axillaris HOM05D008050 ORTHO05D003796 3.2e-19 99.8 149 37.6
Peaxi162Scf00111g00145 Petunia axillaris HOM05D008050 ORTHO05D003796 7.1e-19 98.6 190 33.7
Solyc07g062240.1 Solanum lycopersicum HOM05D007636 ORTHO05D000952 7.1e-19 98.6 187 31.0
Nitab4.5_0001366g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 7.9e-18 95.1 152 34.2
SGA_v2.0_scaffold18G08273 Striga asiatica HOM05D007636 ORTHO05D003796 1.0e-17 94.7 160 34.4
Peaxi162Scf00493g00439 Petunia axillaris HOM05D008149 ORTHO05D010130 2.3e-17 93.6 183 31.1
CAN.G2048.1 Capsicum annuum HOM05D008050 ORTHO05D003796 3.0e-17 93.2 241 32.0
Nitab4.5_0000016g0630 Nicotiana tabacum HOM05D010426 ORTHO05D003796 5.1e-17 92.4 187 35.8
Nitab4.5_0007033g0050 Nicotiana tabacum HOM05D010426 ORTHO05D003796 6.7e-17 92.0 183 36.1
Nitab4.5_0007033g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.5e-16 90.9 183 35.5
Nitab4.5_0000016g0550 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.9e-16 90.5 191 34.6
SGA_v2.0_scaffold135G34844 Striga asiatica HOM05D007636 ORTHO05D003796 1.9e-16 90.5 169 30.2
Nitab4.5_0023007g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 7.4e-16 88.6 189 30.2
SGA_v2.0_scaffold15G07271 Striga asiatica HOM05D007636 ORTHO05D003796 7.4e-16 88.6 169 30.8
Nitab4.5_0000016g0580 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.1e-15 87.0 181 34.3
Nitab4.5_0000016g0610 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.1e-15 87.0 189 32.8
Nitab4.5_0001874g0070 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.1e-15 87.0 252 31.3
Nitab4.5_0007586g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.8e-15 86.7 176 30.1
Nitab4.5_0008515g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.8e-15 86.7 182 34.1
Nitab4.5_0015616g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.8e-15 85.9 176 29.5
PGSC0003DMG400045571 Solanum tuberosum HOM05D008050 ORTHO05D003796 8.2e-15 85.1 169 33.7
PGSC0003DMG400046943 Solanum tuberosum HOM05D008050 ORTHO05D003796 1.1e-14 84.7 190 31.1
PGSC0003DMG400047167 Solanum tuberosum HOM05D008050 ORTHO05D003796 1.1e-14 84.7 209 29.7
Nitab4.5_0001019g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.8e-14 84.0 149 32.9
Nitab4.5_0010629g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.4e-14 83.6 187 33.2
Peaxi162Scf00811g00013 Petunia axillaris HOM05D007636 ORTHO05D003796 2.4e-14 83.6 164 35.4
Peaxi162Scf00811g00023 Petunia axillaris HOM05D007636 ORTHO05D003796 2.4e-14 83.6 164 35.4
Peaxi162Scf02167g00001 Petunia axillaris HOM05D007636 ORTHO05D003796 2.4e-14 83.6 164 35.4
SGA_v2.0_scaffold40G15410 Striga asiatica HOM05D007636 ORTHO05D003796 3.1e-14 83.2 173 30.6
Sopen03g015050 Solanum pennellii HOM05D008050 ORTHO05D003796 1.2e-13 81.3 182 31.3
Nitab4.5_0025925g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.5e-13 80.9 183 33.9
SGA_v2.0_scaffold1G00731 Striga asiatica HOM05D007636 ORTHO05D003796 1.5e-13 80.9 157 31.2
Nitab4.5_0010957g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.6e-13 80.1 250 31.2
CAN.G853.5 Capsicum annuum HOM05D008050 ORTHO05D003796 3.4e-13 79.7 239 30.5
Sopen03g014990 Solanum pennellii HOM05D008050 ORTHO05D003796 3.4e-13 79.7 181 31.5
CAN.G1095.3 Capsicum annuum HOM05D000069 ORTHO05D010130 5.9e-13 79.0 204 30.4
Peaxi162Scf00066g00145 Petunia axillaris HOM05D008149 ORTHO05D010130 5.9e-13 79.0 192 27.6
Nitab4.5_0000082g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 7.6e-13 78.6 252 31.3
SGA_v2.0_scaffold25G10851 Striga asiatica HOM05D007636 ORTHO05D003796 1.0e-12 78.2 161 34.8
SGA_v2.0_scaffold25G10881 Striga asiatica HOM05D007636 ORTHO05D003796 1.0e-12 78.2 161 34.8
SGA_v2.0_scaffold135G34846 Striga asiatica HOM05D007636 ORTHO05D003796 1.3e-12 77.8 236 25.8
Nitab4.5_0000016g0530 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.7e-12 77.4 183 31.1
Peaxi162Scf68101g00002 Petunia axillaris HOM05D007636 ORTHO05D003796 1.7e-12 77.4 164 34.1
Solyc03g062670.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 1.7e-12 77.4 232 30.6
Peaxi162Scf00688g00041 Petunia axillaris HOM05D007636 ORTHO05D003796 2.2e-12 77.0 164 34.1
Peaxi162Scf00688g00314 Petunia axillaris HOM05D007636 ORTHO05D003796 2.2e-12 77.0 164 34.1
PGSC0003DMG400045663 Solanum tuberosum HOM05D008050 ORTHO05D003796 3.8e-12 76.3 234 28.2
CAN.G853.22 Capsicum annuum HOM05D008050 ORTHO05D003796 8.4e-12 75.1 220 30.0
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 8.4e-12 75.1 194 30.9
PGSC0003DMG400040550 Solanum tuberosum HOM05D008050 ORTHO05D003796 8.4e-12 75.1 243 28.8
PSO017G0982 Papaver somniferum HOM05D015969 ORTHO05D012496 1.1e-11 74.7 153 30.1
PSO017G2720 Papaver somniferum HOM05D015969 ORTHO05D012496 1.1e-11 74.7 153 30.1
PSO017G4592 Papaver somniferum HOM05D015969 ORTHO05D012496 1.1e-11 74.7 153 30.1
Sopen04g028020 Solanum pennellii HOM05D007636 ORTHO05D003796 1.4e-11 74.3 207 30.9
PGSC0003DMG400008147 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.4e-11 74.3 159 35.2
PSO017G1432 Papaver somniferum HOM05D015969 ORTHO05D012496 2.5e-11 73.6 153 29.4
PSO017G2205 Papaver somniferum HOM05D015969 ORTHO05D012496 2.5e-11 73.6 153 29.4
PSO017G3163 Papaver somniferum HOM05D015969 ORTHO05D012496 2.5e-11 73.6 153 29.4
PSO017G6949 Papaver somniferum HOM05D015969 ORTHO05D012496 2.5e-11 73.6 153 29.4
CAN.G1424.7 Capsicum annuum HOM05D008050 ORTHO05D003796 3.2e-11 73.2 137 28.5
FAN09G4772 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.2e-11 73.2 247 30.0
Sopen04g028280 Solanum pennellii HOM05D007636 ORTHO05D003796 4.2e-11 72.8 242 28.9
FAN05G2844 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.5e-11 72.4 244 29.1
FAN14G2281 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.5e-11 72.4 244 29.1
Nitab4.5_0001286g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 5.5e-11 72.4 174 29.3
Solyc03g059300.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 5.5e-11 72.4 179 31.3
Solyc04g025760.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 9.3e-11 71.6 174 30.5
FvH4_6g39200 Fragaria vesca HOM05D002630 ORTHO05D000952 1.6e-10 70.9 244 29.1
PSO017G4032 Papaver somniferum HOM05D015969 ORTHO05D012496 1.6e-10 70.9 135 29.6
FAN02G1492 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.1e-10 70.5 206 30.1
FAN05G0057 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.7e-10 70.1 244 28.7
Nitab4.5_0000008g0630 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.7e-10 70.1 201 30.8
Nitab4.5_0004323g0060 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.7e-10 70.1 228 27.6
Sopen04g028190 Solanum pennellii HOM05D007636 ORTHO05D003796 2.7e-10 70.1 242 28.1
Thecc.10G139400 Theobroma cacao HOM05D002630 ORTHO05D000952 2.7e-10 70.1 164 28.7
FvH4_3g18460 Fragaria vesca HOM05D002630 ORTHO05D000952 3.5e-10 69.7 165 29.7
FAN11G1828 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.5e-10 69.7 165 29.7
FAN16G0446 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.5e-10 69.7 165 29.7
Nitab4.5_0000293g0080 Nicotiana tabacum HOM05D010426 ORTHO05D003796 3.5e-10 69.7 198 33.3
Nitab4.5_0001907g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 3.5e-10 69.7 148 31.1
FAN14G5590 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.6e-10 69.3 244 28.7
FAN21G0380 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.6e-10 69.3 165 29.7
Nitab4.5_0001463g0090 Nicotiana tabacum HOM05D007636 ORTHO05D003796 4.6e-10 69.3 210 26.7
PGSC0003DMG400008178 Solanum tuberosum HOM05D008149 ORTHO05D010130 4.6e-10 69.3 161 34.2
PGSC0003DMG400008179 Solanum tuberosum HOM05D008149 ORTHO05D010130 4.6e-10 69.3 171 33.9
FAN08G3500 Fragaria x ananassa HOM05D002630 ORTHO05D000952 6.1e-10 68.9 247 27.1
Nitab4.5_0014265g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 6.1e-10 68.9 209 26.8
FvH4_6g39190 Fragaria vesca HOM05D002630 ORTHO05D000952 1.0e-09 68.2 246 28.9
CAN.G641.11 Capsicum annuum HOM05D008149 ORTHO05D010130 1.3e-09 67.8 109 37.6
FAN05G2222 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.3e-09 67.8 244 28.3
FAN25G3033 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.3e-09 67.8 165 29.7
CAN.G298.56 Capsicum annuum HOM05D007636 ORTHO05D017739 1.8e-09 67.4 266 26.3
Ciclev10013622m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.3e-09 67.0 171 29.8
Lalb_Chr06g0171691 Lupinus albus HOM05D002630 ORTHO05D000952 3.0e-09 66.6 143 31.5
Solyc03g114260.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 3.0e-09 66.6 243 28.0
FAN02G4413 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.9e-09 66.2 235 28.5
FAN04G1225 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.9e-09 66.2 246 28.9
PGSC0003DMG400036456 Solanum tuberosum HOM05D008149 ORTHO05D010130 3.9e-09 66.2 148 27.7
FAN18G3393 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.1e-09 65.9 263 25.5
Nitab4.5_0027357g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 5.1e-09 65.9 88 36.4
RcHm_v2.0_Chr5g0056721 Rosa chinensis HOM05D002630 ORTHO05D000952 5.1e-09 65.9 192 26.6
FvH4_5g25360 Fragaria vesca HOM05D002630 ORTHO05D000952 6.7e-09 65.5 263 25.5
FvH4_6g39600 Fragaria vesca HOM05D002630 ORTHO05D000952 6.7e-09 65.5 213 28.6
Lalb_Chr02g0155901 Lupinus albus HOM05D002630 ORTHO05D000952 6.7e-09 65.5 143 29.4
Lalb_Chr02g0156011 Lupinus albus HOM05D002630 ORTHO05D000952 6.7e-09 65.5 143 29.4
Nitab4.5_0023464g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 8.7e-09 65.1 99 45.5
Solyc03g114220.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 8.7e-09 65.1 200 28.0
MELO3C030697.2 Cucumis melo HOM05D002630 ORTHO05D000952 1.1e-08 64.7 174 28.2
Nitab4.5_0006831g0040 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.1e-08 64.7 77 40.3
PGSC0003DMG400044007 Solanum tuberosum HOM05D009491 ORTHO05D003796 1.1e-08 64.7 115 47.0
MELO3C009980.2 Cucumis melo HOM05D002630 ORTHO05D000952 1.5e-08 64.3 166 28.3
PGSC0003DMG400040065 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.5e-08 64.3 162 31.5
CAN.G78.53 Capsicum annuum HOM05D002725 ORTHO05D003279 2.5e-08 63.5 98 41.8
SGA_v2.0_scaffold42G16094 Striga asiatica HOM05D000010 ORTHO05D026196 2.5e-08 63.5 200 23.5
Atru.chr12.1391 Acer truncatum HOM05D000010 ORTHO05D000952 4.3e-08 62.8 189 29.1
FvH4_5g25510 Fragaria vesca HOM05D002630 ORTHO05D000952 4.3e-08 62.8 246 28.5
FAN08G1554 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.3e-08 62.8 246 27.2
FAN14G5613 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.7e-08 62.4 213 28.2
FAN18G3807 Fragaria x ananassa HOM05D002630 ORTHO05D000952 7.4e-08 62.0 246 28.9
Nitab4.5_0012250g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 7.4e-08 62.0 60 45.0
FAN09G2675 Fragaria x ananassa HOM05D002630 ORTHO05D000952 9.7e-08 61.6 257 25.3
Lj5g0010861 Lotus japonicus HOM05D002630 ORTHO05D000952 9.7e-08 61.6 156 29.5
Sopen03g033300 Solanum pennellii HOM05D008050 ORTHO05D003796 9.7e-08 61.6 229 26.6
SGA_v2.0_scaffold1G00666 Striga asiatica HOM05D007636 ORTHO05D003796 9.7e-08 61.6 153 24.8
Nitab4.5_0010542g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.3e-07 61.2 77 39.0
Sopen03g033310 Solanum pennellii HOM05D008050 ORTHO05D003796 1.3e-07 61.2 229 26.6
SGA_v2.0_scaffold42G16098 Striga asiatica HOM05D000010 ORTHO05D026196 2.8e-07 60.1 196 24.0
Lj5g0002813 Lotus japonicus HOM05D002630 ORTHO05D000952 4.8e-07 59.3 231 26.0
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 4.8e-07 59.3 94 33.0
FvH4_5g35290 Fragaria vesca HOM05D010397 ORTHO05D000952 6.3e-07 58.9 165 29.1
RcHm_v2.0_Chr1g0350911 Rosa chinensis HOM05D011155 ORTHO05D019121 6.3e-07 58.9 156 30.1
RcHm_v2.0_Chr2g0126751 Rosa chinensis HOM05D002630 ORTHO05D000952 6.3e-07 58.9 169 27.2
RcHm_v2.0_Chr7g0211251 Rosa chinensis HOM05D002630 ORTHO05D000952 8.2e-07 58.5 255 26.7
SGA_v2.0_scaffold20G09122 Striga asiatica HOM05D007636 ORTHO05D003796 8.2e-07 58.5 160 29.4
Ciclev10013626m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.1e-06 58.2 182 29.1
FAN18G2210 Fragaria x ananassa HOM05D010397 ORTHO05D000952 1.1e-06 58.2 165 29.1
Atru.chr12.1123 Acer truncatum HOM05D000010 ORTHO05D000952 1.4e-06 57.8 172 29.1
Ciclev10013730m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.4e-06 57.8 182 29.1
MELO3C027409.2 Cucumis melo HOM05D002630 ORTHO05D000952 1.4e-06 57.8 165 26.7
FAN18G2012 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.8e-06 57.4 255 26.3
Nitab4.5_0008734g0030 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.4e-06 57.0 88 34.1
Sed0024693 Sechium edule HOM05D002630 ORTHO05D000952 4.1e-06 56.2 165 26.7
Atru.chr1.394 Acer truncatum HOM05D002630 ORTHO05D000952 6.9e-06 55.5 233 26.2


User provided reference genes

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