Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 9.1e-156 553.5 277 100.0
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 1.8e-151 539.3 277 97.1
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 2.3e-151 538.9 277 96.8
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 3.1e-119 432.2 287 79.4
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.7e-114 416.4 275 80.4
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 5.6e-113 411.4 277 76.9
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 4.7e-112 408.3 280 75.7
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 6.2e-112 407.9 278 76.3
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 8.1e-112 407.5 279 76.0
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 6.8e-111 404.4 282 75.9
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 1.5e-110 403.3 278 74.1
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 2.6e-110 402.5 284 74.6
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 2.6e-110 402.5 279 74.6
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.4e-110 402.1 277 74.7
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 3.4e-110 402.1 277 74.7
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 9.8e-110 400.6 277 74.4
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.7e-109 399.8 280 73.9
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 3.7e-109 398.7 278 73.7
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.3e-109 397.5 280 73.6
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 1.1e-108 397.1 279 72.4
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.4e-108 396.7 284 71.8
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.4e-108 396.7 278 74.8
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 7.1e-108 394.4 279 73.1
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 4.6e-107 391.7 284 71.1
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 6.0e-107 391.3 277 73.3
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 7.8e-107 391.0 282 73.0
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.0e-106 390.6 281 73.0
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 1.3e-106 390.2 277 74.0
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 1.7e-106 389.8 277 74.4
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 1.7e-106 389.8 284 71.5
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 2.3e-106 389.4 280 73.2
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 2.3e-106 389.4 285 72.3
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 3.0e-106 389.0 263 76.8
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 3.9e-106 388.7 279 72.0
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 3.9e-106 388.7 277 73.3
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 8.6e-106 387.5 286 71.7
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 2.5e-105 386.0 283 71.4
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 2.5e-105 386.0 277 70.8
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 3.3e-105 385.6 277 72.6
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 5.6e-105 384.8 278 70.9
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 7.3e-105 384.4 305 67.5
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 7.3e-105 384.4 286 70.3
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 1.2e-104 383.6 282 73.4
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 1.6e-104 383.3 297 68.4
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.1e-104 382.9 284 70.8
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 2.8e-104 382.5 202 93.1
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 2.8e-104 382.5 279 71.0
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 4.7e-104 381.7 282 71.6
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 6.2e-104 381.3 278 72.3
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 1.4e-103 380.2 279 70.6
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 1.4e-103 380.2 278 70.5
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 3.1e-103 379.0 306 68.3
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 4.0e-103 378.6 202 90.1
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 8.9e-103 377.5 277 70.0
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 1.2e-102 377.1 282 70.2
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.2e-102 377.1 286 69.9
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 2.0e-102 376.3 277 69.7
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 7.6e-102 374.4 281 71.9
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 6.4e-101 371.3 280 70.0
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.2e-99 367.1 284 68.3
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 3.5e-99 365.5 282 68.8
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 4.6e-99 365.2 279 71.0
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.7e-98 363.2 277 67.9
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 3.9e-98 362.1 219 78.5
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 5.6e-97 358.2 264 68.2
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 5.6e-97 358.2 279 67.4
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 7.3e-97 357.8 279 67.4
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 1.2e-96 357.1 228 75.4
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 1.2e-96 357.1 283 66.1
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 1.2e-96 357.1 283 66.1
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 1.2e-96 357.1 228 75.4
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 1.2e-96 357.1 280 67.9
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 2.8e-96 355.9 213 82.6
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 4.7e-96 355.1 279 65.6
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 1.1e-95 354.0 279 67.4
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 1.8e-95 353.2 202 85.6
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.1e-95 352.4 233 74.7
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 6.8e-95 351.3 281 66.9
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 6.8e-95 351.3 305 65.2
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 8.9e-95 350.9 282 66.3
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.5e-94 350.1 265 67.9
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 2.6e-94 349.4 279 64.9
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.8e-94 348.2 278 65.8
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 5.8e-94 348.2 282 65.2
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 3.8e-93 345.5 278 66.9
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 6.4e-93 344.7 202 82.7
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 8.4e-93 344.4 276 68.1
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 1.0e-90 337.4 282 66.3
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 2.1e-88 329.7 200 80.5
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 4.8e-88 328.6 178 91.0
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 1.4e-87 327.0 205 78.5
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.8e-87 326.6 232 71.6
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.8e-87 326.6 279 64.5
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 2.4e-87 326.2 202 77.2
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 3.1e-87 325.9 241 69.7
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 2.2e-85 319.7 241 68.9
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 3.5e-83 312.4 214 73.4
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 3.6e-80 302.4 248 63.3
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 3.6e-80 302.4 221 68.8
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 4.0e-79 298.9 257 61.5
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.0e-78 296.6 280 61.1
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 7.6e-78 294.7 200 72.5
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 2.9e-77 292.7 221 69.2
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 2.8e-72 276.2 180 75.6
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 1.5e-70 270.4 198 67.7
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 7.6e-70 268.1 283 55.1
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 3.2e-68 262.7 221 62.9
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 3.5e-67 259.2 156 79.5
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 4.6e-67 258.8 226 58.8
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 1.3e-64 250.8 156 80.8
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.6e-64 250.4 240 58.3
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 1.5e-62 243.8 204 60.8
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 9.3e-60 234.6 219 56.2
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.5e-57 227.3 218 52.8
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 2.0e-54 216.9 207 55.1
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 8.5e-53 211.5 116 86.2
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 2.6e-49 199.9 176 61.9
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 2.9e-45 186.4 114 78.1
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 6.5e-37 158.7 186 50.0
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 8.3e-24 115.2 116 54.3
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 4.1e-23 112.8 81 65.4
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 5.7e-09 65.9 62 58.1
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 9.8e-09 65.1 34 82.4


User provided reference genes

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