Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400000024 Solanum tuberosum HOM05D008446 ORTHO05D010616 3.2e-56 221.5 109 100.0
CAN.G78.51 Capsicum annuum HOM05D008446 ORTHO05D010616 1.0e-49 199.9 109 90.8
Nitab4.5_0009210g0010 Nicotiana tabacum HOM05D008446 ORTHO05D010616 4.7e-47 191.0 110 87.3
Nitab4.5_0002160g0020 Nicotiana tabacum HOM05D008446 ORTHO05D010616 3.0e-46 188.3 110 88.2
Ciclev10033355m.g Citrus clementina HOM05D008446 ORTHO05D010616 8.3e-28 127.1 109 57.8
Actinidia30659 Actinidia chinensis HOM05D008446 ORTHO05D010616 1.6e-26 122.9 104 56.7
Dinv14820 Davidia involucrata HOM05D008446 ORTHO05D010616 3.5e-26 121.7 103 61.2
Atru.chr11.2297 Acer truncatum HOM05D008446 ORTHO05D010616 4.5e-26 121.3 112 53.6
Cc02_g37700 Coffea canephora HOM05D008446 ORTHO05D010616 1.7e-25 119.4 98 60.2
FvH4_3g28341 Fragaria vesca HOM05D008446 ORTHO05D010616 9.5e-24 113.6 107 53.3
Duzib248G0886 Durio zibethinus HOM05D008446 ORTHO05D010616 2.1e-23 112.5 100 54.0
Cfa009335 Carpinus fangiana HOM05D008446 ORTHO05D010616 3.6e-23 111.7 122 49.2
Oeu014670.1 Olea europaea HOM05D008446 ORTHO05D010616 3.6e-23 111.7 107 51.4
Migut.B01727 Erythranthe guttata HOM05D008446 ORTHO05D010616 8.0e-23 110.5 106 51.9
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 1.0e-22 110.2 108 53.7
Prupe.4G256400 Prunus persica HOM05D008446 ORTHO05D010616 1.4e-22 109.8 112 50.9
Cfa005827 Carpinus fangiana HOM05D008446 ORTHO05D010616 1.8e-22 109.4 122 47.5
Oeu053291.1 Olea europaea HOM05D008446 ORTHO05D010616 1.8e-22 109.4 104 51.9
Hma1.2p1_0316F.1_g122850 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 8.9e-22 107.1 103 49.5
Hma1.2p1_0275F.1_g110860 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 2.0e-21 105.9 110 51.8
Aqoxy3G01500 Aquilegia oxysepala HOM05D008446 ORTHO05D010616 3.4e-21 105.1 105 54.3
Haze_12388 Corylus avellana HOM05D008446 ORTHO05D010616 3.4e-21 105.1 137 42.3
Thecc.02G277000 Theobroma cacao HOM05D008446 ORTHO05D010616 9.8e-21 103.6 97 54.6
Gohir.D01G155080 Gossypium hirsutum HOM05D008446 ORTHO05D010616 1.3e-20 103.2 98 51.0
Gohir.A03G127200 Gossypium hirsutum HOM05D008446 ORTHO05D010616 2.8e-20 102.1 94 48.9
Gohir.D02G150600 Gossypium hirsutum HOM05D008446 ORTHO05D010616 2.8e-20 102.1 94 50.0
Gorai.005G168900 Gossypium raimondii HOM05D008446 ORTHO05D010616 4.9e-20 101.3 94 50.0
Oeu056349.1 Olea europaea HOM05D008446 ORTHO05D010616 6.3e-20 100.9 107 49.5
Oeu004522.1 Olea europaea HOM05D008446 ORTHO05D010616 1.1e-19 100.1 107 49.5
Potri.010G058400 Populus trichocarpa HOM05D008446 ORTHO05D010616 2.4e-19 99.0 111 47.7
SGA_v2.0_scaffold95G28851 Striga asiatica HOM05D008446 ORTHO05D010616 3.1e-19 98.6 111 45.0
MD03G1170500 Malus domestica HOM05D008446 ORTHO05D010616 5.4e-19 97.8 118 41.5
ATR0605G179 Amborella trichopoda HOM05D008446 ORTHO05D010616 2.0e-18 95.9 108 47.2
CiPaw.05G112300 Carya illinoinensis HOM05D008446 ORTHO05D010616 3.5e-18 95.1 109 45.9
Manes.13G017900 Manihot esculenta HOM05D008446 ORTHO05D010616 4.5e-18 94.7 109 47.7
CiPaw.06G101000 Carya illinoinensis HOM05D008446 ORTHO05D010616 2.9e-17 92.0 111 44.1
COL.COLO4_20356 Corchorus olitorius HOM05D008446 ORTHO05D010616 3.8e-17 91.7 89 50.6
TAR376G1198 Trochodendron aralioides HOM05D008446 ORTHO05D010616 5.0e-17 91.3 103 43.7
Rhsim12G0028100 Rhododendron simsii HOM05D008446 ORTHO05D010616 1.9e-16 89.4 101 45.5
Gorai.002G192100 Gossypium raimondii HOM05D008446 ORTHO05D010616 3.3e-16 88.6 88 48.9
HanXRQChr08g0207651 Helianthus annuus HOM05D008446 ORTHO05D010616 2.8e-15 85.5 123 37.4
FAN21G1469 Fragaria x ananassa HOM05D008446 ORTHO05D010616 2.3e-14 82.4 87 50.6
Potri.008G176700 Populus trichocarpa HOM05D008446 ORTHO05D010616 6.8e-14 80.9 147 33.3
Sabra10G0047100 Salix brachista HOM05D008446 ORTHO05D010616 1.5e-13 79.7 89 46.1
HPP92_019664 Vanilla planifolia HOM05D008446 ORTHO05D010616 4.4e-13 78.2 109 38.5
Nn6g31552 Nelumbo nucifera HOM05D008446 ORTHO05D010616 5.8e-13 77.8 115 41.7
Sabra08G0134500 Salix brachista HOM05D008446 ORTHO05D010616 9.8e-13 77.0 87 44.8
MBI01_g31983_MAGBIO Magnolia biondii HOM05D008446 ORTHO05D010616 1.3e-12 76.6 107 41.1
HanXRQChr12g0372331 Helianthus annuus HOM05D008446 ORTHO05D010616 1.7e-12 76.3 96 42.7
FAN16G2376 Fragaria x ananassa HOM05D008446 ORTHO05D010616 2.2e-12 75.9 84 47.6
FAN11G2359 Fragaria x ananassa HOM05D008446 ORTHO05D010616 4.9e-12 74.7 83 48.2
ECA233G4326 Erigeron canadensis HOM05D008446 ORTHO05D010616 1.6e-10 69.7 130 35.4
Zm00001eb382010 Zea mays HOM05D008446 ORTHO05D010616 9.5e-08 60.5 108 37.0
Sabra08G0134300 Salix brachista HOM05D008446 ORTHO05D010616 8.0e-07 57.4 72 44.4
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 1.8e-06 56.2 64 45.3


User provided reference genes

Program Settings