Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 1.1e-68 263.1 128 100.0
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.9e-16 89.0 131 42.7
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.7e-14 82.4 108 42.6
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.0e-13 80.5 108 41.7
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.0e-13 79.0 135 41.5
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.0e-13 78.6 133 37.6
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 8.8e-13 77.4 116 37.1
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 8.8e-13 77.4 116 37.1
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 8.8e-13 77.4 114 38.6
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 8.8e-13 77.4 116 40.5
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 1.5e-12 76.6 106 42.5
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 5.7e-12 74.7 135 35.6
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 5.7e-12 74.7 121 34.7
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 7.5e-12 74.3 121 35.5
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 9.8e-12 73.9 107 38.3
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 9.8e-12 73.9 129 36.4
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 9.8e-12 73.9 120 37.5
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 1.3e-11 73.6 121 35.5
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 1.7e-11 73.2 118 36.4
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.7e-11 72.0 123 36.6
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 3.7e-11 72.0 135 34.8
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 3.7e-11 72.0 123 38.2
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 3.7e-11 72.0 129 36.4
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 4.8e-11 71.6 132 32.6
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 4.8e-11 71.6 123 35.0
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 4.8e-11 71.6 106 36.8
PGR005G0005 Punica granatum HOM05D023640 ORTHO05D019592 6.3e-11 71.2 134 38.1
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 8.3e-11 70.9 107 37.4
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 1.1e-10 70.5 112 33.0
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 1.1e-10 70.5 134 34.3
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.1e-10 70.5 132 34.1
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.1e-10 70.5 132 34.1
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.1e-10 70.5 133 34.6
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 1.1e-10 70.5 134 31.3
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 1.4e-10 70.1 108 37.0
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.4e-10 70.1 134 31.3
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.8e-10 69.7 132 34.1
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 1.8e-10 69.7 132 34.1
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 1.8e-10 69.7 113 33.6
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.8e-10 69.7 117 35.0
PGR142G2171 Punica granatum HOM05D023640 ORTHO05D019592 1.8e-10 69.7 134 37.3
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.8e-10 69.7 118 35.6
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 3.1e-10 68.9 122 32.8
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.1e-10 68.9 132 37.1
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 3.1e-10 68.9 108 35.2
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 3.1e-10 68.9 123 34.1
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 4.1e-10 68.6 108 36.1
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.4e-10 68.2 132 37.1
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 5.4e-10 68.2 113 32.7
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 5.4e-10 68.2 123 36.6
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 5.4e-10 68.2 132 29.5
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 1.6e-09 66.6 124 34.7
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 1.6e-09 66.6 119 35.3
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 1.6e-09 66.6 137 37.2
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 2.0e-09 66.2 122 32.8
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 2.7e-09 65.9 128 32.0
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 2.7e-09 65.9 123 34.1
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.7e-09 65.9 133 30.8
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.7e-09 65.9 133 30.8
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 3.5e-09 65.5 129 35.7
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 4.5e-09 65.1 107 32.7
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 4.5e-09 65.1 112 31.2
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 4.5e-09 65.1 135 34.1
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 5.9e-09 64.7 129 32.6
PGR031G3557 Punica granatum HOM05D023640 ORTHO05D019592 5.9e-09 64.7 127 33.9
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 7.7e-09 64.3 112 34.8
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 7.7e-09 64.3 112 34.8
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 7.7e-09 64.3 113 33.6
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 7.7e-09 64.3 123 34.1
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 7.7e-09 64.3 117 35.0
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.3e-08 63.5 106 36.8
PGR031G2486 Punica granatum HOM05D023640 ORTHO05D019592 1.3e-08 63.5 110 40.0
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 1.3e-08 63.5 130 30.0
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 2.2e-08 62.8 120 32.5
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 2.2e-08 62.8 124 30.6
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.9e-08 62.4 125 36.8
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.9e-08 62.4 131 33.6
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.9e-08 62.4 106 36.8
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.9e-08 62.4 124 34.7
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.8e-08 62.0 109 36.7
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 8.5e-08 60.8 117 33.3
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.1e-07 60.5 138 32.6
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 1.1e-07 60.5 135 31.9
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 1.9e-07 59.7 127 33.9
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 1.9e-07 59.7 101 33.7
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 2.5e-07 59.3 126 30.2
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 2.5e-07 59.3 133 30.8
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 4.2e-07 58.5 131 32.8
PGR031G1100 Punica granatum HOM05D023640 ORTHO05D007872 4.2e-07 58.5 129 35.7
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 2.7e-06 55.8 132 29.5
MBI03_g05127_MAGBIO Magnolia biondii HOM05D000022 ORTHO05D002153 3.6e-06 55.5 124 33.1
Aqoxy3G01927 Aquilegia oxysepala HOM05D000022 ORTHO05D002153 6.1e-06 54.7 131 31.3
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.1e-06 54.7 82 37.8
Aqoxy3G01928 Aquilegia oxysepala HOM05D000022 ORTHO05D002153 8.0e-06 54.3 52 48.1
Lsat_1_v5_gn_3_66941 Lactuca sativa HOM05D000022 ORTHO05D002153 8.0e-06 54.3 108 31.5
Solyc01g091040.3 Solanum lycopersicum HOM05D000655 ORTHO05D001166 8.0e-06 54.3 69 40.6
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 8.0e-06 54.3 125 32.0


User provided reference genes

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