Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G4312 Punica granatum HOM05D003649 ORTHO05D004498 1.6e-247 859.0 445 100.0
Duzib168G1903 Durio zibethinus HOM05D003649 ORTHO05D004498 9.4e-195 683.7 442 78.5
Potri.001G394000 Populus trichocarpa HOM05D003649 ORTHO05D004498 4.1e-190 668.3 447 77.2
Actinidia14919 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.0e-188 663.7 448 76.3
Potri.011G112500 Populus trichocarpa HOM05D003649 ORTHO05D004498 1.7e-188 662.9 449 76.8
Gohir.A07G112700 Gossypium hirsutum HOM05D003649 ORTHO05D004498 6.5e-188 661.0 442 75.6
Gorai.001G124600 Gossypium raimondii HOM05D003649 ORTHO05D004498 6.5e-188 661.0 442 76.0
Gohir.D07G116200 Gossypium hirsutum HOM05D003649 ORTHO05D004498 1.4e-187 659.8 442 76.0
CiPaw.08G013900 Carya illinoinensis HOM05D003649 ORTHO05D004498 1.2e-186 656.8 448 76.8
CSS0018218 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 2.7e-186 655.6 446 76.0
Cfa011266 Carpinus fangiana HOM05D003649 ORTHO05D004498 4.7e-186 654.8 446 77.1
CSS0028028 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 1.3e-183 646.7 451 75.4
Prupe.4G148600 Prunus persica HOM05D003649 ORTHO05D004498 2.8e-183 645.6 460 73.5
GSVIVG01011050001 Vitis vinifera HOM05D003649 ORTHO05D004498 2.6e-181 639.0 445 74.4
Thecc.09G274600 Theobroma cacao HOM05D003649 ORTHO05D004498 2.9e-180 635.6 442 74.2
TWI38G0227 Tripterygium wilfordii HOM05D003649 ORTHO05D004498 1.9e-179 632.9 463 70.2
CANSAT01G2347 Cannabis sativa HOM05D003649 ORTHO05D004498 5.5e-179 631.3 450 73.8
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla HOM05D003649 ORTHO05D004498 1.2e-178 630.2 446 74.0
GSVIVG01038352001 Vitis vinifera HOM05D003649 ORTHO05D004498 2.1e-178 629.4 418 77.8
Phvul.004G052800 Phaseolus vulgaris HOM05D003649 ORTHO05D004498 1.0e-177 627.1 445 72.6
Manes.14G150400 Manihot esculenta HOM05D003649 ORTHO05D004498 1.1e-176 623.6 448 72.1
DCAR_002270 Daucus carota HOM05D003649 ORTHO05D004498 4.4e-176 621.7 444 74.1
Manes.14G152600 Manihot esculenta HOM05D003649 ORTHO05D004498 1.3e-175 620.2 448 71.7
Atru.chr3.3291 Acer truncatum HOM05D003649 ORTHO05D004498 4.8e-175 618.2 422 74.9
COL.COLO4_24336 Corchorus olitorius HOM05D003649 ORTHO05D004498 3.1e-174 615.5 452 70.4
Glyma.05G087100 Glycine max HOM05D003649 ORTHO05D004498 9.1e-174 614.0 446 72.0
MD10G1195400 Malus domestica HOM05D003649 ORTHO05D004498 2.6e-173 612.5 433 75.8
Nn7g38381 Nelumbo nucifera HOM05D003649 ORTHO05D004498 1.3e-172 610.1 448 71.0
Lj2g0021753 Lotus japonicus HOM05D003649 ORTHO05D004498 8.5e-172 607.4 447 71.8
Oeu058434.1 Olea europaea HOM05D003649 ORTHO05D004498 8.5e-172 607.4 461 71.1
Ca_25060_v3 Cicer arietinum L. HOM05D003649 ORTHO05D004498 1.9e-171 606.3 448 71.9
Sabra11G0099700 Salix brachista HOM05D003649 ORTHO05D004498 2.5e-171 605.9 435 73.6
Eucgr.F01411 Eucalyptus grandis HOM05D003649 ORTHO05D004498 1.5e-168 596.7 428 74.1
Actinidia37054 Actinidia chinensis HOM05D003649 ORTHO05D004498 2.2e-167 592.8 403 76.2
vmacro10596 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 2.8e-167 592.4 465 68.6
Rhsim09G0104200 Rhododendron simsii HOM05D003649 ORTHO05D004498 5.3e-166 588.2 418 74.2
Hund24921 Selenicereus undatus HOM05D003649 ORTHO05D004498 5.3e-166 588.2 447 67.3
Aqoxy1G02521 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 3.5e-165 585.5 422 72.0
QL02p065039 Quercus lobata HOM05D003649 ORTHO05D004498 1.0e-164 583.9 437 70.9
Lsat_1_v5_gn_5_148460 Lactuca sativa HOM05D003649 ORTHO05D004498 1.3e-164 583.6 451 67.2
Sc26g0001160 Simmondsia chinensis HOM05D003649 ORTHO05D004498 2.9e-164 582.4 422 72.5
HanXRQChr13g0424451 Helianthus annuus HOM05D003649 ORTHO05D004498 3.2e-163 578.9 466 64.8
MSTRG.6707 Avicennia marina HOM05D003649 ORTHO05D004498 2.1e-162 576.2 425 71.5
SalBow5G3252 Salvia bowleyana HOM05D003649 ORTHO05D004498 2.7e-162 575.9 427 70.5
Peaxi162Scf00111g00723 Petunia axillaris HOM05D003649 ORTHO05D004498 3.0e-161 572.4 446 66.6
SGA_v2.0_scaffold73G24356 Striga asiatica HOM05D003649 ORTHO05D004498 8.8e-161 570.9 424 72.9
Glyma.03G190900 Glycine max HOM05D003649 ORTHO05D004498 1.2e-160 570.5 446 67.9
MELO3C024126.2 Cucumis melo HOM05D003649 ORTHO05D004498 9.8e-160 567.4 443 66.8
Lalb_Chr21g0316901 Lupinus albus HOM05D003649 ORTHO05D004498 1.3e-159 567.0 421 70.1
CsaV3_7G025330 Cucumis sativus L. HOM05D003649 ORTHO05D004498 3.7e-159 565.5 444 67.8
Medtr5g025980 Medicago truncatula HOM05D003649 ORTHO05D004498 4.8e-159 565.1 450 66.9
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea HOM05D003649 ORTHO05D004498 1.4e-158 563.5 446 65.0
Nitab4.5_0001924g0070 Nicotiana tabacum HOM05D003649 ORTHO05D004498 1.6e-157 560.1 404 70.3
Ah.13g074570 Amaranthus hybridus HOM05D003649 ORTHO05D004498 2.7e-157 559.3 477 61.8
TPR.G34458 Trifolium pratense HOM05D003649 ORTHO05D004498 5.9e-157 558.1 505 60.8
EL10Ac3g06484 Beta vulgaris HOM05D003649 ORTHO05D004498 1.0e-156 557.4 419 67.5
Rhsim09G0104400 Rhododendron simsii HOM05D003649 ORTHO05D004498 2.9e-156 555.8 445 69.4
SalBow6G0551 Salvia bowleyana HOM05D003649 ORTHO05D004498 6.6e-156 554.7 424 68.2
THA.LOC104814384 Tarenaya hassleriana HOM05D003649 ORTHO05D004498 6.6e-156 554.7 453 66.0
Aa31LG2G14410 Aethionema arabicum HOM05D003649 ORTHO05D004498 8.6e-156 554.3 450 64.9
SalBow8G0566 Salvia bowleyana HOM05D003649 ORTHO05D004498 1.9e-155 553.1 424 67.9
Haze_02513 Corylus avellana HOM05D003649 ORTHO05D004498 7.2e-155 551.2 491 64.6
PSO675G2950 Papaver somniferum HOM05D003649 ORTHO05D004498 7.2e-155 551.2 449 65.7
FvH4_3g16580 Fragaria vesca HOM05D003649 ORTHO05D004498 2.1e-154 549.7 476 62.4
TAR627G1042 Trochodendron aralioides HOM05D003649 ORTHO05D004498 3.6e-154 548.9 376 74.7
AUR62036018 Chenopodium quinoa HOM05D003649 ORTHO05D004498 6.1e-154 548.1 446 63.7
ECA236G2713 Erigeron canadensis HOM05D003649 ORTHO05D004498 1.8e-153 546.6 419 66.8
PGSC0003DMG400027653 Solanum tuberosum HOM05D003649 ORTHO05D004498 2.3e-153 546.2 451 63.4
PSO541G1065 Papaver somniferum HOM05D003649 ORTHO05D004498 8.9e-153 544.3 452 65.5
CARHR286950 Cardamine hirsuta HOM05D003649 ORTHO05D004498 5.7e-152 541.6 451 63.4
MD05G1209000 Malus domestica HOM05D003649 ORTHO05D004498 9.8e-152 540.8 385 74.8
Ciclev10023274m.g Citrus clementina HOM05D003649 ORTHO05D004498 3.7e-151 538.9 356 75.8
Cc05_g10190 Coffea canephora HOM05D003649 ORTHO05D004498 4.9e-151 538.5 330 80.6
Sed0023018 Sechium edule HOM05D003649 ORTHO05D004498 4.9e-151 538.5 451 64.1
Thhalv10007604m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 3.1e-150 535.8 457 63.5
AT1G31660 Arabidopsis thaliana HOM05D003649 ORTHO05D004498 4.5e-149 531.9 452 61.7
Carub.0001s2998 Capsella rubella HOM05D003649 ORTHO05D004498 5.9e-149 531.6 453 62.5
Sp1g27340 Schrenkiella parvula HOM05D003649 ORTHO05D004498 2.9e-148 529.3 456 61.6
FAN11G3158 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.1e-147 527.3 472 61.4
RcHm_v2.0_Chr5g0027651 Rosa chinensis HOM05D003649 ORTHO05D004498 1.1e-147 527.3 447 63.3
Cpa.g.sc54.5 Carica papaya HOM05D003649 ORTHO05D004498 1.5e-147 526.9 474 62.0
FAN21G1332 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.2e-146 523.9 475 60.4
arahy.Tifrunner.gnm1.ann1.V43L5Z Arachis hypogaea HOM05D003649 ORTHO05D004498 3.6e-146 522.3 449 61.5
EL10Ac3g06580 Beta vulgaris HOM05D003649 ORTHO05D004498 3.6e-146 522.3 423 63.6
AUR62035508 Chenopodium quinoa HOM05D003649 ORTHO05D004498 1.4e-145 520.4 446 61.9
MBI17_g43195_MAGBIO Magnolia biondii HOM05D003649 ORTHO05D004498 1.8e-145 520.0 385 71.2
FAN25G2823 Fragaria x ananassa HOM05D003649 ORTHO05D004498 2.3e-145 519.6 443 62.8
ClCG09G009520 Citrullus lanatus HOM05D003649 ORTHO05D004498 3.1e-145 519.2 422 64.9
FAN16G3269 Fragaria x ananassa HOM05D003649 ORTHO05D004498 4.0e-145 518.8 448 62.1
Haze_18856 Corylus avellana HOM05D003649 ORTHO05D004498 6.8e-145 518.1 485 60.6
FAN21G3990 Fragaria x ananassa HOM05D003649 ORTHO05D004498 8.9e-145 517.7 448 62.3
C07p14470 Brassica napus HOM05D003649 ORTHO05D004498 9.8e-144 514.2 454 60.8
Migut.M00658 Erythranthe guttata HOM05D003649 ORTHO05D004498 4.9e-143 511.9 428 63.6
Psat2g144640 Pisum sativum HOM05D003649 ORTHO05D004498 4.9e-143 511.9 402 67.4
ATR1132G059 Amborella trichopoda HOM05D003649 ORTHO05D004498 6.4e-143 511.5 397 66.2
BolC7t41946H Brassica oleracea HOM05D003649 ORTHO05D004498 6.4e-143 511.5 454 60.4
VMungo1127G0750 Vigna mungo HOM05D003649 ORTHO05D004498 4.1e-142 508.8 370 71.9
CDE06G0350 Ceratophyllum demersum HOM05D003649 ORTHO05D004498 2.0e-141 506.5 425 63.3
arahy.Tifrunner.gnm1.ann1.FP5V95 Arachis hypogaea HOM05D003649 ORTHO05D004498 2.7e-141 506.1 445 60.2
BcaB03g13795 Brassica carinata HOM05D003649 ORTHO05D004498 6.0e-141 505.0 425 63.1
Migut.M00659 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.7e-140 503.4 465 59.4
arahy.Tifrunner.gnm1.ann1.956DWW Arachis hypogaea HOM05D003649 ORTHO05D004498 3.3e-139 499.2 399 64.9
Sopen07g029910 Solanum pennellii HOM05D003649 ORTHO05D004498 9.5e-139 497.7 423 62.2
Nitab4.5_0001864g0020 Nicotiana tabacum HOM05D003649 ORTHO05D004498 1.6e-138 496.9 422 61.4
Lj1C808T9 Lonicera japonica HOM05D003649 ORTHO05D004498 4.7e-138 495.4 377 69.2
COL.COLO4_22663 Corchorus olitorius HOM05D003649 ORTHO05D004498 8.0e-138 494.6 471 58.8
unitig_748.g7599 Utricularia gibba HOM05D003649 ORTHO05D004498 3.1e-137 492.7 425 63.8
A07p09400 Brassica napus HOM05D003649 ORTHO05D004498 5.8e-136 488.4 436 60.1
BraA07t28735Z Brassica rapa HOM05D003649 ORTHO05D004498 2.2e-135 486.5 427 60.9
Os09g0352400 Oryza sativa ssp. japonica HOM05D003649 ORTHO05D004498 2.9e-135 486.1 422 61.8
A09p34660 Brassica napus HOM05D003649 ORTHO05D004498 7.3e-131 471.5 413 60.3
Solyc07g056550.3 Solanum lycopersicum HOM05D003649 ORTHO05D004498 7.3e-131 471.5 399 62.4
Thecc.09G275100 Theobroma cacao HOM05D003649 ORTHO05D004498 1.2e-130 470.7 319 74.3
PSO339G1025 Papaver somniferum HOM05D003649 ORTHO05D004498 6.2e-130 468.4 449 57.7
PSO339G4670 Papaver somniferum HOM05D003649 ORTHO05D004498 4.0e-129 465.7 449 57.5
Migut.J00669 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.5e-128 463.8 450 57.6
vmacro10597 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.7e-127 460.3 511 54.2
BraA09t39000Z Brassica rapa HOM05D003649 ORTHO05D004498 2.4e-126 456.4 413 58.6
Pp3c10_5710 Physcomitrium patens HOM05D003649 ORTHO05D004498 2.5e-123 446.4 458 52.8
Pp3c14_4070 Physcomitrium patens HOM05D003649 ORTHO05D004498 2.4e-121 439.9 420 54.8
BcaB07g32813 Brassica carinata HOM05D003649 ORTHO05D004498 4.0e-121 439.1 392 58.7
Gohir.A09G098001 Gossypium hirsutum HOM05D003649 ORTHO05D004498 7.6e-120 434.9 264 78.4
Zm00001eb065940 Zea mays HOM05D003649 ORTHO05D004498 8.4e-119 431.4 435 56.8
SMO358G0130 Selaginella moellendorffii HOM05D003649 ORTHO05D004498 1.4e-118 430.6 432 53.2
HPP92_001514 Vanilla planifolia HOM05D003649 ORTHO05D004498 1.4e-118 430.6 391 60.6
Aqoxy5G01320 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 6.0e-117 425.2 312 68.3
Ah.13g066610 Amaranthus hybridus HOM05D003649 ORTHO05D004498 7.8e-117 424.9 356 61.8
CANSAT80G0167 Cannabis sativa HOM05D003649 ORTHO05D004498 3.9e-116 422.5 296 73.0
BcaC05g27183 Brassica carinata HOM05D003649 ORTHO05D004498 6.6e-116 421.8 427 54.3
Mapoly0048s0058 Marchantia polymorpha HOM05D003649 ORTHO05D004498 2.5e-115 419.9 436 51.1
AagrBONN_evm.TU.Sc2ySwM_117.301 Anthoceros agrestis HOM05D003649 ORTHO05D004498 1.2e-112 411.0 329 61.4
CBR_g984 Chara braunii HOM05D003649 ORTHO05D004498 2.9e-111 406.4 405 55.1
MCO03G098 Micromonas commoda HOM05D003649 ORTHO05D004498 2.9e-103 379.8 451 47.7
BolC5t31810H Brassica oleracea HOM05D003649 ORTHO05D004498 3.8e-103 379.4 346 58.1
PRCOL_00003636 Prasinoderma coloniale HOM05D003649 ORTHO05D004498 2.8e-98 363.2 371 51.2
TPR.G9666 Trifolium pratense HOM05D003649 ORTHO05D004498 6.2e-98 362.1 287 65.9
BcaC06g35364 Brassica carinata HOM05D003649 ORTHO05D004498 2.4e-97 360.1 409 52.3
A07p11220 Brassica napus HOM05D003649 ORTHO05D004498 4.0e-97 359.4 407 51.8
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.2e-96 357.8 268 72.4
A07p08470 Brassica napus HOM05D003649 ORTHO05D004498 3.4e-96 356.3 404 51.2
BraA07t28915Z Brassica rapa HOM05D003649 ORTHO05D004498 1.4e-94 350.9 390 52.1
Thhalv10028678m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 3.0e-92 343.2 436 48.2
C07p16930 Brassica napus HOM05D003649 ORTHO05D004498 8.2e-90 335.1 434 48.8
Cre01.g063267 Chlamydomonas reinhardtii HOM05D003649 ORTHO05D004498 9.0e-89 331.6 472 42.8
C07p13190 Brassica napus HOM05D003649 ORTHO05D004498 3.2e-86 323.2 363 50.1
BolC7t41812H Brassica oleracea HOM05D003649 ORTHO05D004498 4.2e-86 322.8 363 50.1
BolC7t42199H Brassica oleracea HOM05D003649 ORTHO05D004498 1.0e-84 318.2 353 52.7
BcaC06g35591 Brassica carinata HOM05D003649 ORTHO05D004498 7.4e-83 312.0 352 50.0
CANSAT54G0397 Cannabis sativa HOM05D003649 ORTHO05D004498 9.7e-83 311.6 208 74.5
RcHm_v2.0_Chr6g0291881 Rosa chinensis HOM05D003649 ORTHO05D004498 1.5e-80 304.3 377 47.7
Atru.chr3.2268 Acer truncatum HOM05D003649 ORTHO05D004498 3.8e-79 299.7 449 44.8
Atru.chr3.2262 Acer truncatum HOM05D003649 ORTHO05D004498 9.4e-78 295.0 448 44.2
Cfa024010 Carpinus fangiana HOM05D003649 ORTHO05D004498 2.9e-55 220.3 491 33.6
Pp3c1_22730 Physcomitrium patens HOM05D003649 ORTHO05D004498 3.4e-51 206.8 153 65.4
SEGI_32462 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 1.3e-47 194.9 125 73.6
arahy.Tifrunner.gnm1.ann1.KE86EX Arachis hypogaea HOM05D003649 ORTHO05D004498 1.5e-46 191.4 200 50.5
Sabra16G0258400 Salix brachista HOM05D003649 ORTHO05D004498 7.0e-41 172.6 141 64.5
SEGI_37931 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 3.7e-34 150.2 94 73.4
arahy.Tifrunner.gnm1.ann1.S7QI7K Arachis hypogaea HOM05D003649 ORTHO05D004498 1.8e-33 147.9 166 50.6
DCAR_030783 Daucus carota HOM05D003649 ORTHO05D004498 2.5e-30 137.5 146 56.2
Actinidia13653 Actinidia chinensis HOM05D003649 ORTHO05D004498 2.1e-29 134.4 133 56.4
AL6G50590 Arabidopsis lyrata HOM05D003649 ORTHO05D004498 2.1e-29 134.4 146 47.3
arahy.Tifrunner.gnm1.ann1.CT835L Arachis hypogaea HOM05D003649 ORTHO05D004498 6.4e-26 122.9 119 53.8
C07p16950 Brassica napus HOM05D003649 ORTHO05D027520 1.4e-25 121.7 205 40.5
BolC9t56391H Brassica oleracea HOM05D003649 ORTHO05D004498 7.0e-25 119.4 98 56.1
RhsimUnG0127900 Rhododendron simsii HOM05D003649 ORTHO05D004498 9.2e-25 119.0 84 67.9
C09p35520 Brassica napus HOM05D003649 ORTHO05D004498 2.3e-23 114.4 94 56.4
A09p28020 Brassica napus HOM05D003649 ORTHO05D004498 8.6e-23 112.5 94 57.4
BraA07t28632Z Brassica rapa HOM05D003649 ORTHO05D004498 8.6e-23 112.5 101 54.5
Thecc.09G274800 Theobroma cacao HOM05D003649 ORTHO05D004498 1.7e-18 98.2 73 68.5
DCAR_030782 Daucus carota HOM05D003649 ORTHO05D004498 6.4e-18 96.3 72 69.4
SEGI_11889 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 2.4e-17 94.4 125 48.8
BolC7t42200H Brassica oleracea HOM05D003649 ORTHO05D027520 1.6e-16 91.7 121 47.1
SGA_v2.0_scaffold30G12442 Striga asiatica HOM05D003649 ORTHO05D004498 4.6e-16 90.1 104 50.0
BcaC05g27926 Brassica carinata HOM05D003649 ORTHO05D004498 3.3e-14 84.0 337 28.2
C07p16940 Brassica napus HOM05D003649 ORTHO05D027520 5.6e-14 83.2 121 44.6
BolC7t42195H Brassica oleracea HOM05D003649 ORTHO05D040526 1.1e-12 79.0 96 46.9
Atru.chr3.2263 Acer truncatum HOM05D003649 ORTHO05D004498 1.8e-12 78.2 81 60.5
Atru.chr3.2269 Acer truncatum HOM05D003649 ORTHO05D004498 3.1e-12 77.4 81 60.5
BcaC04g21367 Brassica carinata HOM05D001554 ORTHO05D001481 1.7e-10 71.6 54 53.7
C09p32650 Brassica napus HOM05D003649 ORTHO05D004498 1.7e-10 71.6 54 53.7
SGA_v2.0_scaffold24G10283 Striga asiatica HOM05D003649 ORTHO05D031702 3.7e-10 70.5 49 63.3
C09p35530 Brassica napus HOM05D003649 ORTHO05D004498 1.1e-09 68.9 193 35.8
MBI19_g34544_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 1.6e-08 65.1 39 79.5
C07p16900 Brassica napus HOM05D003649 ORTHO05D040526 1.7e-07 61.6 83 43.4
SHI14588 Sapria himalayana HOM05D003649 ORTHO05D004498 1.7e-07 61.6 42 71.4
SHI14583 Sapria himalayana HOM05D003649 ORTHO05D004498 2.5e-06 57.8 102 44.1


User provided reference genes

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