Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G4281 Punica granatum HOM05D004140 ORTHO05D006116 4.2e-295 1017.3 518 100.0
Eucgr.K02037 Eucalyptus grandis HOM05D004140 ORTHO05D006116 2.2e-232 808.9 528 79.0
TWI77G1027 Tripterygium wilfordii HOM05D004140 ORTHO05D006116 4.1e-226 788.1 527 77.6
Gohir.D04G099900 Gossypium hirsutum HOM05D004140 ORTHO05D006116 1.5e-223 779.6 523 77.1
Gorai.009G402800 Gossypium raimondii HOM05D004140 ORTHO05D006116 3.2e-223 778.5 523 76.9
CANSAT80G0330 Cannabis sativa HOM05D004140 ORTHO05D006116 1.6e-222 776.2 522 78.0
COL.COLO4_29732 Corchorus olitorius HOM05D004140 ORTHO05D006116 2.1e-222 775.8 523 77.1
Rhsim07G0139000 Rhododendron simsii HOM05D004140 ORTHO05D006116 6.1e-222 774.2 526 74.7
QL07p038993 Quercus lobata HOM05D004140 ORTHO05D006116 2.3e-221 772.3 523 76.5
QL07p038742 Quercus lobata HOM05D004140 ORTHO05D006116 3.0e-221 771.9 523 76.3
Manes.08G025400 Manihot esculenta HOM05D004140 ORTHO05D006116 2.6e-220 768.8 528 76.1
MELO3C009474.2 Cucumis melo HOM05D004140 ORTHO05D006116 5.7e-220 767.7 520 75.8
Thecc.05G089300 Theobroma cacao HOM05D004140 ORTHO05D006116 2.8e-219 765.4 525 76.2
Gohir.A04G062800 Gossypium hirsutum HOM05D004140 ORTHO05D006116 4.9e-219 764.6 523 75.7
Nn6g34895 Nelumbo nucifera HOM05D004140 ORTHO05D006116 1.4e-218 763.1 529 74.1
CsaV3_3G037290 Cucumis sativus L. HOM05D004140 ORTHO05D006116 9.2e-218 760.4 520 75.6
Sed0020948 Sechium edule HOM05D004140 ORTHO05D006116 3.5e-217 758.4 520 75.6
Lj2A137T30 Lonicera japonica HOM05D004140 ORTHO05D006116 7.7e-217 757.3 531 74.2
arahy.Tifrunner.gnm1.ann1.0JB8QE Arachis hypogaea HOM05D004140 ORTHO05D006116 5.0e-216 754.6 548 73.4
arahy.Tifrunner.gnm1.ann1.IX7NGG Arachis hypogaea HOM05D004140 ORTHO05D006116 1.9e-215 752.7 548 73.2
Glyma.01G077300 Glycine max HOM05D004140 ORTHO05D006116 3.6e-214 748.4 455 81.8
MD12G1036400 Malus domestica HOM05D004140 ORTHO05D006116 4.0e-213 745.0 528 73.5
Actinidia18162 Actinidia chinensis HOM05D004140 ORTHO05D006116 5.2e-213 744.6 535 72.0
ClCG10G018960 Citrullus lanatus HOM05D004140 ORTHO05D006116 8.9e-213 743.8 523 74.6
Medtr7g030010 Medicago truncatula HOM05D004140 ORTHO05D006116 2.0e-212 742.7 521 73.1
Medtr7g038740 Medicago truncatula HOM05D004140 ORTHO05D006116 2.0e-212 742.7 521 73.1
Hma1.2p1_0084F.1_g043830 Hydrangea macrophylla HOM05D004140 ORTHO05D006116 9.8e-212 740.3 525 72.4
Glyma.11G176309 Glycine max HOM05D004140 ORTHO05D006116 1.3e-211 740.0 517 74.3
RcHm_v2.0_Chr3g0473691 Rosa chinensis HOM05D004140 ORTHO05D006116 2.9e-211 738.8 523 74.2
FAN02G3405 Fragaria x ananassa HOM05D004140 ORTHO05D006116 6.4e-211 737.6 520 74.4
Sopen04g018570 Solanum pennellii HOM05D004140 ORTHO05D006116 1.1e-210 736.9 522 72.4
Actinidia14741 Actinidia chinensis HOM05D004140 ORTHO05D006116 2.4e-210 735.7 473 77.0
Potri.004G090400 Populus trichocarpa HOM05D004140 ORTHO05D006116 5.4e-210 734.6 454 80.2
Haze_19613 Corylus avellana HOM05D004140 ORTHO05D006116 9.2e-210 733.8 588 67.0
FAN05G3313 Fragaria x ananassa HOM05D004140 ORTHO05D006116 2.7e-209 732.3 516 74.0
FAN14G5862 Fragaria x ananassa HOM05D004140 ORTHO05D006116 3.5e-209 731.9 516 74.0
Nitab4.5_0008893g0010 Nicotiana tabacum HOM05D004140 ORTHO05D006116 3.5e-209 731.9 521 72.6
GSVIVG01033846001 Vitis vinifera HOM05D004140 ORTHO05D006116 3.0e-208 728.8 433 83.1
FAN05G2644 Fragaria x ananassa HOM05D004140 ORTHO05D006116 3.9e-208 728.4 530 72.6
Nitab4.5_0000071g0150 Nicotiana tabacum HOM05D004140 ORTHO05D006116 5.0e-208 728.0 521 72.2
Aqoxy2G01189 Aquilegia oxysepala HOM05D004140 ORTHO05D006116 6.6e-208 727.6 521 72.9
CiPaw.09G014200 Carya illinoinensis HOM05D004140 ORTHO05D006116 1.1e-207 726.9 525 72.8
VMungo1383G3240 Vigna mungo HOM05D004140 ORTHO05D006116 3.3e-207 725.3 518 73.0
Lalb_Chr07g0194001 Lupinus albus HOM05D004140 ORTHO05D006116 5.6e-207 724.5 523 72.3
MD14G1023200 Malus domestica HOM05D004140 ORTHO05D006116 7.3e-207 724.2 535 71.2
TAR633G1381 Trochodendron aralioides HOM05D004140 ORTHO05D006116 2.1e-206 722.6 525 71.6
Sabra04G0060700 Salix brachista HOM05D004140 ORTHO05D006116 1.0e-205 720.3 462 77.9
CAN.G1407.2 Capsicum annuum HOM05D004140 ORTHO05D006116 3.1e-205 718.8 516 72.1
SGA_v2.0_scaffold13G06716 Striga asiatica HOM05D004140 ORTHO05D006116 4.4e-204 714.9 452 79.0
Sc02g0000260 Simmondsia chinensis HOM05D004140 ORTHO05D006116 9.8e-204 713.8 433 81.1
THA.LOC104823220 Tarenaya hassleriana HOM05D004140 ORTHO05D006116 5.4e-202 708.0 528 70.5
Atru.chr8.1534 Acer truncatum HOM05D004140 ORTHO05D006116 2.0e-201 706.1 526 70.5
Duzib093G1424 Durio zibethinus HOM05D004140 ORTHO05D006116 3.5e-201 705.3 522 71.5
SalBow3G3032 Salvia bowleyana HOM05D004140 ORTHO05D006116 1.3e-200 703.4 525 69.9
Lj1g0011596 Lotus japonicus HOM05D004140 ORTHO05D006116 1.7e-200 703.0 536 69.8
Migut.J01039 Erythranthe guttata HOM05D004140 ORTHO05D006116 2.3e-200 702.6 459 77.3
CDE06G1324 Ceratophyllum demersum HOM05D004140 ORTHO05D006116 1.1e-199 700.3 449 75.7
ATR0776G070 Amborella trichopoda HOM05D004140 ORTHO05D006116 1.9e-199 699.5 526 68.1
Cc06_g05780 Coffea canephora HOM05D004140 ORTHO05D006116 4.7e-198 694.9 432 79.2
HanXRQChr05g0163581 Helianthus annuus HOM05D004140 ORTHO05D006116 8.9e-197 690.6 525 66.3
Dinv31688 Davidia involucrata HOM05D004140 ORTHO05D006116 1.3e-195 686.8 402 83.8
ECA248G2777 Erigeron canadensis HOM05D004140 ORTHO05D000452 8.3e-195 684.1 450 73.3
Phvul.008G154100 Phaseolus vulgaris HOM05D004140 ORTHO05D006116 3.5e-193 678.7 518 69.3
AT5G03900 Arabidopsis thaliana HOM05D004140 ORTHO05D006116 1.0e-192 677.2 530 67.4
Ciclev10013333m.g Citrus clementina HOM05D004140 ORTHO05D006116 1.7e-192 676.4 520 68.5
TPR.G39122 Trifolium pratense HOM05D004140 ORTHO05D006116 1.2e-190 670.2 547 63.6
AL6G13480 Arabidopsis lyrata HOM05D004140 ORTHO05D006116 3.1e-189 665.6 530 66.6
Peaxi162Scf01227g00030 Petunia axillaris HOM05D004140 ORTHO05D006116 4.0e-189 665.2 522 66.3
Lsat_1_v5_gn_5_164821 Lactuca sativa HOM05D004140 ORTHO05D006116 1.5e-188 663.3 530 65.8
vmacro14235 Vaccinium macrocarpon HOM05D004140 ORTHO05D006116 2.0e-188 662.9 804 49.4
Carub.0006s0285 Capsella rubella HOM05D004140 ORTHO05D006116 5.8e-188 661.4 526 65.8
BolC9t60037H Brassica oleracea HOM05D004140 ORTHO05D006116 1.4e-186 656.8 528 66.3
Ah.15g090870 Amaranthus hybridus HOM05D004140 ORTHO05D006116 1.9e-186 656.4 529 65.4
BraA02t04791Z Brassica rapa HOM05D004140 ORTHO05D006116 1.9e-186 656.4 527 65.7
A10p32220 Brassica napus HOM05D004140 ORTHO05D006116 7.1e-186 654.4 528 65.5
BraA10t45265Z Brassica rapa HOM05D004140 ORTHO05D006116 7.1e-186 654.4 528 65.5
Sp6g38830 Schrenkiella parvula HOM05D004140 ORTHO05D006116 2.7e-185 652.5 463 71.3
CARHR209360 Cardamine hirsuta HOM05D004140 ORTHO05D006116 1.0e-184 650.6 525 65.9
PSO384G3764 Papaver somniferum HOM05D004140 ORTHO05D006116 1.3e-184 650.2 458 68.8
PSO339G4989 Papaver somniferum HOM05D004140 ORTHO05D006116 1.7e-184 649.8 545 62.6
C02p01600 Brassica napus HOM05D004140 ORTHO05D006116 3.9e-184 648.7 527 65.3
Aa31LG1G21380 Aethionema arabicum HOM05D004140 ORTHO05D006116 8.6e-184 647.5 533 64.0
C09p73020 Brassica napus HOM05D004140 ORTHO05D006116 1.9e-183 646.4 541 64.1
BolC2t06125H Brassica oleracea HOM05D004140 ORTHO05D006116 2.8e-182 642.5 527 64.7
Thhalv10013253m.g Eutrema salsugineum HOM05D004140 ORTHO05D006116 4.7e-182 641.7 531 64.4
unitig_578.g16025 Utricularia gibba HOM05D004140 ORTHO05D006116 8.1e-182 641.0 526 64.4
BcaC06g32093 Brassica carinata HOM05D004140 ORTHO05D006116 1.4e-181 640.2 523 64.6
CDE08G0731 Ceratophyllum demersum HOM05D004140 ORTHO05D006116 2.4e-181 639.4 410 75.4
Ca_19610_v3 Cicer arietinum L. HOM05D004140 ORTHO05D006116 7.6e-180 634.4 403 77.7
Prupe.7G109900 Prunus persica HOM05D004140 ORTHO05D006116 3.5e-177 625.5 392 78.3
FvH4_6g18720 Fragaria vesca HOM05D004140 ORTHO05D006116 2.5e-175 619.4 404 77.2
AUR62028518 Chenopodium quinoa HOM05D004140 ORTHO05D006116 1.3e-174 617.1 528 63.3
Cfa016609 Carpinus fangiana HOM05D004140 ORTHO05D006116 3.1e-173 612.5 429 73.7
EL10Ac7g16915 Beta vulgaris HOM05D004140 ORTHO05D006116 8.4e-171 604.4 454 67.4
Zm00001eb242770 Zea mays HOM05D004140 ORTHO05D006116 7.9e-169 597.8 501 63.9
AUR62006183 Chenopodium quinoa HOM05D004140 ORTHO05D006116 1.9e-167 593.2 587 57.4
Os02g0533000 Oryza sativa ssp. japonica HOM05D004140 ORTHO05D006116 3.3e-167 592.4 449 68.4
Hma1.2p1_0820F.1_g223840 Hydrangea macrophylla HOM05D004140 ORTHO05D006116 9.6e-167 590.9 479 66.2
BcaB05g21796 Brassica carinata HOM05D004140 ORTHO05D006116 1.3e-166 590.5 481 64.2
Hund19931 Selenicereus undatus HOM05D004140 ORTHO05D006116 2.0e-164 583.2 581 56.1
HPP92_005468 Vanilla planifolia HOM05D004140 ORTHO05D006116 7.6e-164 581.3 475 64.2
DCAR_013387 Daucus carota HOM05D004140 ORTHO05D006116 2.2e-163 579.7 408 71.8
CSS0000051 Camellia sinensis var. sinensis HOM05D004140 ORTHO05D006116 5.6e-159 565.1 419 70.4
Solyc04g049130.4 Solanum lycopersicum HOM05D004140 ORTHO05D006116 2.8e-158 562.8 404 72.0
HanXRQChr01g0001941 Helianthus annuus HOM05D004140 ORTHO05D006116 9.6e-151 537.7 547 54.8
Migut.J01040 Erythranthe guttata HOM05D004140 ORTHO05D006116 2.4e-149 533.1 458 62.9
RcHm_v2.0_Chr3g0473761 Rosa chinensis HOM05D004140 ORTHO05D006116 4.6e-145 518.8 537 55.7
Pp3c24_800 Physcomitrium patens HOM05D004140 ORTHO05D006116 6.1e-145 518.5 452 60.0
Mapoly0014s0147 Marchantia polymorpha HOM05D004140 ORTHO05D006116 4.1e-141 505.8 450 56.9
AagrBONN_evm.TU.Sc2ySwM_117.4009 Anthoceros agrestis HOM05D004140 ORTHO05D006116 2.2e-134 483.4 434 56.7
Nitab4.5_0004212g0030 Nicotiana tabacum HOM05D004140 ORTHO05D006116 1.2e-129 467.6 450 58.4
DCAR_007754 Daucus carota HOM05D004140 ORTHO05D006116 5.7e-127 458.8 409 61.1
CBR_g12587 Chara braunii HOM05D004140 ORTHO05D006116 1.1e-125 454.5 468 51.9
SMO137G0276 Selaginella moellendorffii HOM05D004140 ORTHO05D006116 1.7e-118 430.6 456 51.1
DCAR_020746 Daucus carota HOM05D004140 ORTHO05D006116 1.4e-117 427.6 498 49.8
Psat3g173320 Pisum sativum HOM05D004140 ORTHO05D006116 4.3e-98 362.8 278 69.4
PRCOL_00000272 Prasinoderma coloniale HOM05D004140 ORTHO05D006116 4.4e-95 352.8 444 43.9
Cpa.g.sc5.17 Carica papaya HOM05D004140 ORTHO05D006116 1.8e-93 347.4 398 53.0
MCO08G276 Micromonas commoda HOM05D004140 ORTHO05D006116 1.8e-93 347.4 440 44.8
Psat3g173280 Pisum sativum HOM05D004140 ORTHO05D006116 7.8e-92 342.0 215 77.2
HanXRQChr01g0001931 Helianthus annuus HOM05D004140 ORTHO05D006116 8.0e-89 332.0 299 57.9
FvH4_6g18750 Fragaria vesca HOM05D004140 ORTHO05D006116 1.7e-83 314.3 366 50.3
Cre07.g338350 Chlamydomonas reinhardtii HOM05D004140 ORTHO05D006116 2.1e-81 307.4 474 38.8
Cc00_g34730 Coffea canephora HOM05D004140 ORTHO05D006116 6.4e-70 269.2 229 66.4
Lj2A1003T9 Lonicera japonica HOM05D004140 ORTHO05D006116 5.8e-63 246.1 187 68.4
BcaC03g12977 Brassica carinata HOM05D004140 ORTHO05D006116 1.3e-59 235.0 159 71.1
SEGI_29241 Sequoiadendron giganteum HOM05D004140 ORTHO05D006116 3.5e-52 210.3 158 66.5
RcHm_v2.0_Chr2g0168601 Rosa chinensis HOM05D004140 ORTHO05D006116 1.0e-51 208.8 249 47.8
FvH4_6g48690 Fragaria vesca HOM05D004140 ORTHO05D006116 4.8e-49 199.9 246 46.7
FAN02G1609 Fragaria x ananassa HOM05D004140 ORTHO05D006116 1.1e-48 198.7 246 46.7
Peaxi162Scf00858g00312 Petunia axillaris HOM05D004140 ORTHO05D006116 2.3e-43 181.0 454 34.6
PGSC0003DMG400019058 Solanum tuberosum HOM05D004140 ORTHO05D006116 6.7e-43 179.5 115 76.5
FvH4_6g48680 Fragaria vesca HOM05D004140 ORTHO05D045602 1.5e-39 168.3 244 45.9
FvH4_6g18760 Fragaria vesca HOM05D004140 ORTHO05D006116 2.6e-39 167.5 171 57.3
RcHm_v2.0_Chr3g0473711 Rosa chinensis HOM05D004140 ORTHO05D006116 5.8e-39 166.4 129 65.9
FAN09G1572 Fragaria x ananassa HOM05D004140 ORTHO05D006116 1.3e-38 165.2 349 33.8
FAN05G3929 Fragaria x ananassa HOM05D004140 ORTHO05D018624 2.2e-38 164.5 166 59.0
FAN14G0184 Fragaria x ananassa HOM05D004140 ORTHO05D006116 2.9e-38 164.1 241 43.2
RcHm_v2.0_Chr3g0473731 Rosa chinensis HOM05D004140 ORTHO05D006116 6.5e-38 162.9 170 56.5
FAN05G4146 Fragaria x ananassa HOM05D004140 ORTHO05D006116 8.4e-38 162.5 166 58.4
FAN14G1397 Fragaria x ananassa HOM05D004140 ORTHO05D045602 2.5e-37 161.0 237 45.1
FAN14G0820 Fragaria x ananassa HOM05D004140 ORTHO05D006116 3.2e-37 160.6 165 57.6
Cpa.g.sc5.18 Carica papaya HOM05D004140 ORTHO05D006116 3.5e-36 157.1 131 64.9
RcHm_v2.0_Chr3g0473721 Rosa chinensis HOM05D004140 ORTHO05D006116 6.9e-32 142.9 100 69.0
DCAR_013386 Daucus carota HOM05D004140 ORTHO05D006116 2.9e-30 137.5 112 62.5
SEGI_03177 Sequoiadendron giganteum HOM05D004140 ORTHO05D006116 2.9e-30 137.5 141 53.2
SEGI_36218 Sequoiadendron giganteum HOM05D004140 ORTHO05D006116 1.9e-29 134.8 96 68.8
Ca_23048_v3 Cicer arietinum L. HOM05D004140 ORTHO05D018624 7.4e-26 122.9 134 56.7
RcHm_v2.0_Chr6g0257921 Rosa chinensis HOM05D004140 ORTHO05D006116 2.8e-25 120.9 79 77.2
FvH4_6g48650 Fragaria vesca HOM05D004140 ORTHO05D197702 6.9e-24 116.3 245 33.5
FAN09G0971 Fragaria x ananassa HOM05D004140 ORTHO05D045442 2.6e-23 114.4 221 38.0
FAN02G1460 Fragaria x ananassa HOM05D004140 ORTHO05D018624 4.5e-23 113.6 128 55.5
FvH4_6g48651 Fragaria vesca HOM05D004140 ORTHO05D045442 7.7e-23 112.8 221 37.6
SHI23815 Sapria himalayana HOM05D004140 ORTHO05D006116 8.8e-19 99.4 94 50.0
CAN.G2500.2 Capsicum annuum HOM05D004140 ORTHO05D018624 3.3e-18 97.4 128 51.6
arahy.Tifrunner.gnm1.ann1.LXEN71 Arachis hypogaea HOM05D000344 ORTHO05D005296 4.4e-18 97.1 63 71.4
arahy.Tifrunner.gnm1.ann1.2FV8W6 Arachis hypogaea HOM05D000344 ORTHO05D005296 1.7e-17 95.1 63 71.4
FvH4_6g18751 Fragaria vesca HOM05D004140 ORTHO05D018624 9.1e-16 89.4 114 51.8
MCO05G565 Micromonas commoda HOM05D004140 ORTHO05D269347 9.1e-16 89.4 144 34.7
SEGI_11477 Sequoiadendron giganteum HOM05D004140 ORTHO05D006116 5.5e-13 80.1 84 51.2
BcaC05g27055 Brassica carinata HOM05D004140 ORTHO05D018624 4.1e-08 63.9 45 68.9
C05p29120 Brassica napus HOM05D004140 ORTHO05D018624 4.1e-08 63.9 45 68.9
BolC5t31642H Brassica oleracea HOM05D004140 ORTHO05D018624 4.1e-08 63.9 45 68.9
C02p01250 Brassica napus HOM05D004140 ORTHO05D010099 1.2e-07 62.4 44 72.7
C02p01230 Brassica napus HOM05D004140 ORTHO05D024608 1.6e-07 62.0 38 68.4
C02p01370 Brassica napus HOM05D004140 ORTHO05D024608 1.6e-07 62.0 38 68.4
C02p01440 Brassica napus HOM05D004140 ORTHO05D024608 1.6e-07 62.0 38 68.4
BolC2t06113H Brassica oleracea HOM05D004140 ORTHO05D024608 1.6e-07 62.0 38 68.4
FAN05G4745 Fragaria x ananassa HOM05D000532 ORTHO05D002414 2.9e-06 57.8 54 46.3


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