Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 2.5e-264 914.8 441 100.0
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.9e-188 661.4 446 73.3
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 4.2e-187 658.3 429 73.4
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 9.3e-187 657.1 443 73.8
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 1.2e-186 656.8 432 74.3
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 2.7e-186 655.6 437 71.6
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 6.0e-186 654.4 423 74.7
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 6.0e-186 654.4 443 71.6
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 1.3e-185 653.3 442 72.6
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 1.8e-185 652.9 449 70.6
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 2.3e-185 652.5 443 71.3
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 2.3e-185 652.5 423 75.2
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 3.0e-185 652.1 444 71.4
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 6.7e-185 651.0 443 72.2
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 1.1e-184 650.2 443 72.2
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 1.1e-184 650.2 444 73.4
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 1.1e-184 650.2 443 72.9
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 1.5e-184 649.8 433 73.2
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 2.5e-184 649.0 436 72.7
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.5e-184 649.0 443 72.9
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 3.3e-184 648.7 422 75.8
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 4.3e-184 648.3 444 72.5
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 5.6e-184 647.9 443 72.7
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 7.4e-184 647.5 419 74.5
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 1.6e-183 646.4 423 73.5
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 8.1e-183 644.0 423 73.8
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 1.1e-182 643.7 421 73.9
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 1.1e-182 643.7 419 74.2
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.8e-182 642.9 429 71.1
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 6.9e-182 641.0 440 70.9
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 9.0e-182 640.6 441 72.1
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 1.2e-181 640.2 425 72.5
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.0e-181 639.4 423 72.6
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.9e-180 635.6 423 72.3
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 6.4e-180 634.4 443 70.4
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 8.4e-180 634.0 422 71.6
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 7.1e-179 630.9 414 75.4
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 9.3e-179 630.6 444 68.7
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 2.1e-178 629.4 434 73.0
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 2.7e-178 629.0 433 68.4
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 2.7e-178 629.0 444 68.7
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 3.5e-178 628.6 439 70.6
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 4.6e-178 628.2 444 70.0
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 6.0e-178 627.9 440 68.6
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 6.0e-178 627.9 457 69.4
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 1.0e-177 627.1 438 69.4
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 1.0e-177 627.1 449 67.9
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 2.3e-177 625.9 421 72.0
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 3.0e-177 625.5 430 71.9
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 6.7e-177 624.4 443 70.9
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 1.5e-176 623.2 425 72.0
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 1.5e-176 623.2 421 71.5
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 1.9e-176 622.9 425 72.0
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 1.9e-176 622.9 422 72.3
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 2.5e-176 622.5 425 71.3
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 3.3e-176 622.1 425 71.8
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 3.3e-176 622.1 443 69.5
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 4.3e-176 621.7 421 71.0
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 5.6e-176 621.3 421 71.5
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 5.6e-176 621.3 440 69.3
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 5.6e-176 621.3 465 67.7
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 9.6e-176 620.5 421 71.5
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 1.3e-175 620.2 421 71.0
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 1.6e-175 619.8 438 68.5
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 1.6e-175 619.8 422 71.1
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 2.8e-175 619.0 443 68.8
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 4.8e-175 618.2 419 70.4
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 6.2e-175 617.8 419 69.2
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 1.4e-174 616.7 421 70.5
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-174 616.7 421 70.3
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 3.1e-174 615.5 430 70.5
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 4.5e-173 611.7 421 70.8
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 4.5e-173 611.7 421 70.8
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 5.8e-173 611.3 443 67.5
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 2.2e-172 609.4 420 68.6
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 2.2e-172 609.4 448 67.2
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 6.5e-172 607.8 427 70.5
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 1.4e-171 606.7 426 71.1
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 1.4e-171 606.7 422 69.7
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 3.2e-171 605.5 442 69.0
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 6.0e-170 601.3 420 69.5
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 2.3e-169 599.4 461 66.2
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 3.9e-169 598.6 448 66.3
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 4.3e-168 595.1 442 65.8
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.3e-167 593.6 435 68.5
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 3.7e-167 592.0 443 66.8
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 8.2e-167 590.9 443 65.2
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 2.4e-166 589.3 430 67.4
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 5.3e-166 588.2 447 65.3
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 6.9e-166 587.8 441 64.6
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 1.2e-165 587.0 418 67.7
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 1.0e-164 583.9 418 68.2
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 1.0e-164 583.9 439 64.7
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.2e-164 582.8 423 65.5
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 6.5e-164 581.3 432 66.0
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 6.5e-164 581.3 432 66.0
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.4e-163 580.1 444 63.5
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 3.2e-163 578.9 417 67.4
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 6.1e-162 574.7 430 64.2
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 1.4e-161 573.5 446 61.2
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 3.9e-161 572.0 430 63.7
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 6.7e-161 571.2 411 65.9
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 4.8e-159 565.1 446 64.6
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 1.2e-157 560.5 421 66.5
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.0e-157 559.7 448 63.4
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.1e-155 553.9 423 64.1
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 2.7e-154 549.3 416 63.9
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 1.8e-153 546.6 420 64.3
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.6e-152 542.7 447 59.5
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 3.3e-152 542.3 424 61.6
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 5.7e-152 541.6 423 64.8
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 6.5e-148 528.1 460 55.7
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.8e-145 520.0 419 60.9
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 1.1e-144 517.3 431 57.1
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 1.8e-142 510.0 420 58.1
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 2.6e-141 506.1 362 70.7
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 4.5e-141 505.4 420 57.1
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.2e-132 476.5 398 57.5
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 3.7e-127 459.1 413 59.1
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 1.8e-121 440.3 442 49.3
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 1.6e-114 417.2 317 66.9
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 4.0e-113 412.5 418 50.7
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 1.7e-111 407.1 419 46.5
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 3.7e-111 406.0 273 69.6
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 1.4e-110 404.1 441 51.0
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 8.6e-108 394.8 441 50.8
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 9.5e-107 391.3 352 53.4
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 3.6e-106 389.4 303 62.7
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 1.5e-104 384.0 422 45.0
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 1.7e-92 344.0 418 43.1
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 4.4e-88 329.3 240 68.3
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 1.4e-86 324.3 259 64.1
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 6.0e-85 318.9 293 51.9
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 7.3e-83 312.0 234 66.7
Lj3C845T9 Lonicera japonica HOM05D004203 ORTHO05D004830 3.5e-53 213.4 161 65.2
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 8.7e-52 208.8 319 36.7
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 7.4e-51 205.7 160 63.8
Sc08g0004150 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.6e-50 204.5 152 65.8
Sc08g0004170 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.1e-46 191.8 137 67.2
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 3.2e-46 190.3 147 65.3
Solyc11g006360.1 Solanum lycopersicum HOM05D004203 ORTHO05D004830 2.5e-43 180.6 119 71.4
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 6.3e-42 176.0 211 48.3
FAN12G3670 Fragaria x ananassa HOM05D004203 ORTHO05D004830 6.1e-37 159.5 160 55.6
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-33 148.3 163 52.8
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 7.7e-32 142.5 132 60.6
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 7.7e-32 142.5 411 26.0
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 2.9e-23 114.0 79 69.6
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 9.4e-22 109.0 80 66.2
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 6.1e-21 106.3 80 67.5
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 1.5e-19 101.7 72 70.8
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 5.7e-19 99.8 105 51.4
BcaB06g27492 Brassica carinata HOM05D004203 ORTHO05D004830 5.7e-19 99.8 97 57.7
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 3.5e-16 90.5 68 52.9
Sc08g0004140 Simmondsia chinensis HOM05D004203 ORTHO05D004830 3.5e-16 90.5 97 52.6
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 6.5e-15 86.3 92 47.8
GSVIVG01034364001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.6e-13 80.5 60 61.7
BcaB06g27494 Brassica carinata HOM05D004203 ORTHO05D004830 6.1e-13 79.7 61 65.6
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 1.8e-12 78.2 61 63.9
COL.COLO4_33125 Corchorus olitorius HOM05D004203 ORTHO05D004830 4.4e-11 73.6 63 60.3
MCO08G255 Micromonas commoda HOM05D004203 ORTHO05D004830 8.3e-10 69.3 106 38.7
BcaB06g26577 Brassica carinata HOM05D004203 ORTHO05D004830 4.1e-09 67.0 55 65.5
BcaC07g38231 Brassica carinata HOM05D004203 ORTHO05D004830 1.6e-08 65.1 58 62.1
SEGI_15796 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.6e-08 65.1 58 56.9
Pp3c14_4390 Physcomitrium patens HOM05D004203 ORTHO05D004830 2.9e-07 60.8 60 43.3
BcaB05g24942 Brassica carinata HOM05D004203 ORTHO05D004830 1.5e-06 58.5 50 54.0


User provided reference genes

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