Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 3.9e-145 518.1 256 100.0
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 1.6e-101 373.2 247 76.5
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 2.5e-99 365.9 205 83.9
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 7.2e-99 364.4 252 71.4
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 2.7e-98 362.5 244 73.8
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 8.0e-98 360.9 250 71.6
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.4e-97 360.1 249 72.7
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 4.0e-97 358.6 247 74.1
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 5.2e-97 358.2 217 77.0
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 1.5e-96 356.7 247 73.7
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 4.4e-96 355.1 248 71.8
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.3e-95 353.6 227 75.3
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 1.7e-95 353.2 254 71.7
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.7e-95 353.2 247 73.3
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 2.2e-95 352.8 231 73.2
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 3.7e-95 352.1 255 71.8
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 8.3e-95 350.9 227 74.4
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 1.1e-94 350.5 227 74.4
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.1e-94 350.5 227 74.4
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 1.8e-94 349.7 254 70.1
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 3.1e-94 349.0 227 74.4
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 3.1e-94 349.0 249 70.3
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 7.0e-94 347.8 202 82.2
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 2.0e-93 346.3 232 71.1
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 3.5e-93 345.5 252 71.4
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 3.5e-93 345.5 258 70.2
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 3.5e-93 345.5 255 70.2
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 4.5e-93 345.1 256 69.5
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 4.5e-93 345.1 251 67.7
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 4.5e-93 345.1 254 67.7
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 7.7e-93 344.4 207 79.2
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 7.7e-93 344.4 239 69.9
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 7.7e-93 344.4 255 69.4
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 1.3e-92 343.6 253 69.6
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 5.0e-92 341.7 232 70.3
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 1.5e-91 340.1 232 71.1
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 5.5e-91 338.2 240 69.6
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 7.2e-91 337.8 232 70.3
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 7.2e-91 337.8 198 80.8
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 9.5e-91 337.4 255 67.1
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 2.1e-90 336.3 240 69.6
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 2.1e-90 336.3 256 66.8
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 2.1e-90 336.3 235 68.5
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 2.8e-90 335.9 249 68.7
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 2.8e-90 335.9 255 67.5
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 3.6e-90 335.5 201 77.6
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 3.6e-90 335.5 201 77.6
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 1.0e-89 334.0 255 68.2
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 1.0e-89 334.0 247 67.6
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 1.4e-89 333.6 258 65.5
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 2.3e-89 332.8 233 70.0
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 2.3e-89 332.8 250 66.8
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 3.0e-89 332.4 197 78.7
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 5.2e-89 331.6 195 79.0
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 6.8e-89 331.3 250 66.0
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 6.8e-89 331.3 250 66.0
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 8.9e-89 330.9 229 72.5
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 1.2e-88 330.5 193 79.3
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 1.2e-88 330.5 202 75.2
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 1.5e-88 330.1 254 66.5
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 2.6e-88 329.3 227 71.4
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 4.4e-88 328.6 202 76.7
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 9.8e-88 327.4 197 77.7
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 9.8e-88 327.4 254 65.0
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 2.2e-87 326.2 252 65.9
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.8e-87 325.9 242 69.4
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.8e-87 325.9 242 69.4
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 4.9e-87 325.1 214 73.8
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 4.9e-87 325.1 247 65.2
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 6.3e-87 324.7 251 65.3
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 1.8e-86 323.2 215 72.6
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 1.8e-86 323.2 197 77.2
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 4.1e-86 322.0 263 62.7
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 4.5e-85 318.5 205 74.1
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 7.8e-85 317.8 215 70.7
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 7.8e-85 317.8 251 65.3
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.0e-84 317.4 245 65.3
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.0e-84 317.4 227 69.2
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 3.8e-84 315.5 251 64.1
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 6.6e-84 314.7 224 71.4
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 1.5e-83 313.5 196 77.6
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 2.3e-81 306.2 222 68.0
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 4.0e-81 305.4 176 77.8
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 8.9e-81 304.3 273 60.4
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 1.2e-80 303.9 181 77.3
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 2.0e-80 303.1 252 64.3
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 2.6e-80 302.8 202 71.3
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 4.4e-80 302.0 233 64.4
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 9.8e-80 300.8 178 80.9
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 4.9e-79 298.5 168 82.1
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 1.1e-78 297.4 175 77.7
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.7e-76 290.0 167 80.2
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 1.7e-76 290.0 200 70.5
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 2.5e-75 286.2 175 77.1
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 6.8e-73 278.1 250 58.0
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 5.8e-72 275.0 166 78.9
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.3e-63 247.3 163 68.7
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.1e-62 244.2 227 56.8
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.6e-61 240.4 250 52.0
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.1e-59 234.2 172 68.6
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.2e-57 225.3 131 80.2
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 1.9e-54 216.9 171 57.3
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 2.7e-53 213.0 271 45.4
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 1.3e-52 210.7 196 51.0
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.8e-36 157.1 130 63.1
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 4.3e-35 152.5 154 49.4
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 9.0e-25 118.2 247 35.2
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 2.0e-24 117.1 62 85.5
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 6.5e-23 112.1 170 41.2
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 3.2e-22 109.8 58 84.5
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.5e-22 109.0 67 76.1
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.3e-19 99.8 81 61.7
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 3.7e-10 69.7 63 49.2


User provided reference genes

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