Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G4074 Punica granatum HOM05D007902 ORTHO05D009839 1.6e-115 419.5 216 100.0
Haze_17334 Corylus avellana HOM05D007902 ORTHO05D009839 7.8e-38 161.4 191 45.0
Eucgr.G03123 Eucalyptus grandis HOM05D007902 ORTHO05D009839 8.1e-35 151.4 186 46.8
Potri.019G049100 Populus trichocarpa HOM05D007902 ORTHO05D009839 3.1e-34 149.4 190 43.2
Sabra19G0058600 Salix brachista HOM05D007902 ORTHO05D009839 4.0e-34 149.1 193 44.0
TAR623G0347 Trochodendron aralioides HOM05D007902 ORTHO05D009839 1.2e-33 147.5 190 46.3
Dinv21823 Davidia involucrata HOM05D007902 ORTHO05D009839 3.8e-32 142.5 189 43.4
Manes.07G138200 Manihot esculenta HOM05D007902 ORTHO05D009839 1.1e-31 141.0 187 41.7
Gohir.D13G005400 Gossypium hirsutum HOM05D007902 ORTHO05D009839 1.9e-31 140.2 190 43.7
Gorai.013G006100 Gossypium raimondii HOM05D007902 ORTHO05D009839 1.9e-31 140.2 190 43.7
QL08p064506 Quercus lobata HOM05D007902 ORTHO05D009839 3.2e-31 139.4 190 40.5
Gohir.A13G005700 Gossypium hirsutum HOM05D007902 ORTHO05D009839 5.4e-31 138.7 190 42.6
CiPaw.01G304600 Carya illinoinensis HOM05D007902 ORTHO05D009839 6.0e-30 135.2 189 40.7
Ciclev10032767m.g Citrus clementina HOM05D007902 ORTHO05D009839 6.0e-30 135.2 184 41.3
Nn2g10362 Nelumbo nucifera HOM05D007902 ORTHO05D009839 6.0e-30 135.2 188 40.4
Hma1.2p1_0292F.1_g115760 Hydrangea macrophylla HOM05D007902 ORTHO05D009839 7.9e-30 134.8 183 44.3
HanXRQChr09g0251491 Helianthus annuus HOM05D007902 ORTHO05D009839 1.0e-29 134.4 186 41.4
Actinidia07804 Actinidia chinensis HOM05D007902 ORTHO05D009839 2.3e-29 133.3 183 43.7
Cpa.g.sc19.89 Carica papaya HOM05D007902 ORTHO05D009839 2.3e-29 133.3 215 39.5
vmacro09979 Vaccinium macrocarpon HOM05D007902 ORTHO05D009839 1.5e-28 130.6 175 42.3
TWI53G0910 Tripterygium wilfordii HOM05D007902 ORTHO05D009839 1.3e-27 127.5 167 46.7
Lsat_1_v5_gn_9_59200 Lactuca sativa HOM05D007902 ORTHO05D009839 1.6e-27 127.1 212 36.8
PSO017G6410 Papaver somniferum HOM05D007902 ORTHO05D009839 1.4e-26 124.0 235 34.9
Ca_06023_v3 Cicer arietinum L. HOM05D007902 ORTHO05D009839 5.3e-26 122.1 183 39.3
Cc02_g05590 Coffea canephora HOM05D007902 ORTHO05D009839 1.2e-25 120.9 187 43.3
CANSAT56G3130 Cannabis sativa HOM05D007902 ORTHO05D009839 4.5e-25 119.0 166 43.4
Hund13474 Selenicereus undatus HOM05D007902 ORTHO05D009839 4.5e-25 119.0 193 39.4
COL.COLO4_26867 Corchorus olitorius HOM05D005928 ORTHO05D007500 7.6e-25 118.2 188 40.4
Aqoxy4G02352 Aquilegia oxysepala HOM05D007902 ORTHO05D009839 1.3e-24 117.5 216 35.6
AT5G05330 Arabidopsis thaliana HOM05D007902 ORTHO05D009839 2.9e-24 116.3 189 38.1
PSO407G0011 Papaver somniferum HOM05D007902 ORTHO05D009839 3.8e-24 115.9 182 40.7
EL10Ac2g04265 Beta vulgaris HOM05D007902 ORTHO05D009839 6.4e-24 115.2 191 38.7
Prupe.2G261300 Prunus persica HOM05D007902 ORTHO05D009839 6.4e-24 115.2 192 40.6
BraA10t45132Z Brassica rapa HOM05D007902 ORTHO05D009839 8.4e-24 114.8 191 38.7
Sp6g37500 Schrenkiella parvula HOM05D007902 ORTHO05D009839 8.4e-24 114.8 188 38.8
BcaB05g21722 Brassica carinata HOM05D007902 ORTHO05D009839 1.4e-23 114.0 184 38.6
BcaC03g13156 Brassica carinata HOM05D007902 ORTHO05D009839 1.4e-23 114.0 182 37.9
C09p71380 Brassica napus HOM05D007902 ORTHO05D009839 3.2e-23 112.8 190 38.9
Migut.F00588 Erythranthe guttata HOM05D007902 ORTHO05D009839 3.2e-23 112.8 168 40.5
BcaC06g32241 Brassica carinata HOM05D007902 ORTHO05D009839 4.2e-23 112.5 190 38.4
CARHR207920 Cardamine hirsuta HOM05D007902 ORTHO05D009839 5.5e-23 112.1 190 37.4
Carub.0006s0425 Capsella rubella HOM05D007902 ORTHO05D009839 7.1e-23 111.7 189 38.1
MD01G1163300 Malus domestica HOM05D007902 ORTHO05D009839 7.1e-23 111.7 194 38.7
C02p02280 Brassica napus HOM05D007902 ORTHO05D009839 1.2e-22 110.9 182 37.9
FvH4_7g25601 Fragaria vesca HOM05D007902 ORTHO05D009839 1.6e-22 110.5 177 39.0
Atru.chr12.150 Acer truncatum HOM05D005928 ORTHO05D007500 2.1e-22 110.2 200 40.5
AL6G15200 Arabidopsis lyrata HOM05D007902 ORTHO05D009839 2.1e-22 110.2 189 37.0
BraA02t04842Z Brassica rapa HOM05D007902 ORTHO05D009839 2.1e-22 110.2 182 36.8
FAN03G2841 Fragaria x ananassa HOM05D001122 ORTHO05D001877 3.5e-22 109.4 177 39.0
MD07G1231300 Malus domestica HOM05D007902 ORTHO05D009839 3.5e-22 109.4 195 37.9
FAN01G1070 Fragaria x ananassa HOM05D001122 ORTHO05D001877 6.0e-22 108.6 177 38.4
arahy.Tifrunner.gnm1.ann1.C7E7HV Arachis hypogaea HOM05D007902 ORTHO05D009839 7.9e-22 108.2 178 39.3
BolC9t59901H Brassica oleracea HOM05D007902 ORTHO05D009839 1.3e-21 107.5 191 37.7
Thhalv10014946m.g Eutrema salsugineum HOM05D007902 ORTHO05D009839 1.3e-21 107.5 167 38.3
arahy.Tifrunner.gnm1.ann1.0H4UJT Arachis hypogaea HOM05D007902 ORTHO05D009839 1.8e-21 107.1 178 38.8
Peaxi162Scf00464g00015 Petunia axillaris HOM05D007902 ORTHO05D009839 2.3e-21 106.7 183 36.6
CAN.G591.5 Capsicum annuum HOM05D007902 ORTHO05D009839 3.0e-21 106.3 190 35.8
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 1.1e-20 104.4 186 37.1
Sopen06g015820 Solanum pennellii HOM05D007902 ORTHO05D009839 1.9e-20 103.6 185 35.1
RcHm_v2.0_Chr1g0371741 Rosa chinensis HOM05D007902 ORTHO05D009839 2.5e-20 103.2 193 36.3
Rhsim09G0183800 Rhododendron simsii HOM05D007902 ORTHO05D009839 3.3e-20 102.8 216 31.9
Thecc.10G175100 Theobroma cacao HOM05D007902 ORTHO05D009839 1.3e-19 100.9 189 36.5
SalBow5G2004 Salvia bowleyana HOM05D007902 ORTHO05D009839 1.8e-18 97.1 190 36.8
FAN06G1561 Fragaria x ananassa HOM05D007902 ORTHO05D009839 5.3e-18 95.5 177 37.3
BolC2t06195H Brassica oleracea HOM05D007902 ORTHO05D009839 6.9e-18 95.1 182 34.6
Medtr0191s0020 Medicago truncatula HOM05D007902 ORTHO05D009839 4.5e-17 92.4 181 35.4
TAR623G0840 Trochodendron aralioides HOM05D007902 ORTHO05D009839 4.5e-17 92.4 86 57.0
Psat1g014880 Pisum sativum HOM05D007902 ORTHO05D009839 5.8e-17 92.0 178 33.1
Sc10g0002880 Simmondsia chinensis HOM05D007902 ORTHO05D009839 3.8e-16 89.4 82 54.9
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 2.7e-14 83.2 173 34.7
PGSC0003DMG400029078 Solanum tuberosum HOM05D007902 ORTHO05D009839 6.0e-14 82.0 144 34.0
Nitab4.5_0002713g0030 Nicotiana tabacum HOM05D007902 ORTHO05D009839 7.9e-14 81.6 184 33.2
LjContig00357g0001230 Lotus japonicus HOM05D007902 ORTHO05D009839 1.3e-13 80.9 184 31.0
COL.COLO4_08802 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.5e-12 77.4 62 62.9
unitig_52.g16781 Utricularia gibba HOM05D007902 ORTHO05D009839 5.7e-12 75.5 143 34.3
Nitab4.5_0000263g0270 Nicotiana tabacum HOM05D007902 ORTHO05D009839 1.6e-11 73.9 184 31.0
Oeu054429.1 Olea europaea HOM05D007902 ORTHO05D009839 2.4e-10 70.1 136 32.4
MBI03_g40382_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 4.1e-10 69.3 77 41.6
CDE07G0481 Ceratophyllum demersum HOM05D007902 ORTHO05D009839 5.3e-10 68.9 157 36.3
Lj1A965T42 Lonicera japonica HOM05D007902 ORTHO05D009839 6.9e-10 68.6 80 45.0
Lj1C1068T20 Lonicera japonica HOM05D007902 ORTHO05D009839 1.2e-09 67.8 80 45.0
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 7.6e-09 65.1 180 28.3
THA.LOC104818386 Tarenaya hassleriana HOM05D000727 ORTHO05D000541 1.3e-08 64.3 184 28.8
BcaNung01853 Brassica carinata HOM05D003223 ORTHO05D014735 1.7e-08 63.9 54 51.9
Os08g0101100 Oryza sativa ssp. japonica HOM05D000727 ORTHO05D000541 5.0e-08 62.4 169 29.0
AUR62032906 Chenopodium quinoa HOM05D000727 ORTHO05D000541 8.5e-08 61.6 203 24.6
A09p06950 Brassica napus HOM05D000727 ORTHO05D000541 1.1e-07 61.2 182 25.8
BraA09t36343Z Brassica rapa HOM05D000727 ORTHO05D000541 1.1e-07 61.2 182 25.8
RhsimUnG0102400 Rhododendron simsii HOM05D000727 ORTHO05D000541 1.1e-07 61.2 190 27.9
AUR62017747 Chenopodium quinoa HOM05D000727 ORTHO05D000541 1.9e-07 60.5 203 24.6
Hund09512 Selenicereus undatus HOM05D000727 ORTHO05D000541 3.2e-07 59.7 163 27.6
MBI03_g13448_MAGBIO Magnolia biondii HOM05D000727 ORTHO05D000541 4.2e-07 59.3 182 27.5
Ah.01g011600 Amaranthus hybridus HOM05D000727 ORTHO05D000541 5.5e-07 58.9 171 25.7
ECA232G2170 Erigeron canadensis HOM05D001122 ORTHO05D001877 5.5e-07 58.9 76 40.8
Actinidia04069 Actinidia chinensis HOM05D000727 ORTHO05D000541 7.2e-07 58.5 166 27.7
MBI19_g06976_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 7.2e-07 58.5 56 44.6
Prupe.1G350700 Prunus persica HOM05D000727 ORTHO05D000541 9.3e-07 58.2 172 28.5
TAR622G0466 Trochodendron aralioides HOM05D000727 ORTHO05D000541 2.1e-06 57.0 179 25.7
MBI18_g32335_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 3.6e-06 56.2 53 43.4
PGR044G1367 Punica granatum HOM05D000727 ORTHO05D000541 3.6e-06 56.2 168 28.0
BcaC04g23495 Brassica carinata HOM05D000727 ORTHO05D000541 4.6e-06 55.8 164 26.2
C09p07710 Brassica napus HOM05D000727 ORTHO05D000541 4.6e-06 55.8 164 26.2
BolC9t53688H Brassica oleracea HOM05D000727 ORTHO05D000541 4.6e-06 55.8 164 26.2
Thhalv10004817m.g Eutrema salsugineum HOM05D000727 ORTHO05D000541 4.6e-06 55.8 174 28.2
PSO339G3557 Papaver somniferum HOM05D000727 ORTHO05D000541 6.1e-06 55.5 164 25.0


User provided reference genes

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